Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Lj5g0008955 PTHR22870//PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION // REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED chr5 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G6980 LG-4 + View
Acer truncatum Atru.chr13.2214 chr13 - View
Actinidia chinensis Actinidia10666 Lachesis_group28 + View
Actinidia chinensis Actinidia15147 Lachesis_group26 + View
Arabidopsis lyrata AL2G37080 scaffold_2 + View
Amaranthus hybridus Ah.05g167730 AmaHy_arrow1_Scaffold_5 - View
Aquilegia oxysepala Aqoxy5G02144 CHR05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.AAAS1H PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.0KPM2I PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED arahy.Tifrunner.gnm1.Arahy.15 + View
Arabidopsis thaliana AT1G76950 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein PRAF1%3B FUNCTIONS IN: chromatin binding%2C zinc ion binding%2C Ran GTPase binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation%2C RCC1 (InterPro:IPR000408)%2C Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591)%2C Zinc finger%2C FYVE-type (InterPro:IPR000306)%2C Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091)%2C Zinc finger%2C FYVE-related (InterPro:IPR017455)%2C Pleckstrin homology-type (InterPro:IPR011993)%2C Zinc finger%2C FYVE/PHD-type (InterPro:IPR011011)%3B BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G42140.1)%3B Has 21693 Blast hits to 8422 proteins in 452 species: Archae - 63%3B Bacteria - 2065%3B Metazoa - 9089%3B Fungi - 1093%3B Plants - 3056%3B Viruses - 5%3B Other Eukaryotes - 6322 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaB02g07086 ChrB02 + View
Beta vulgaris EL10Ac1g01509 PTHR22870//PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION // REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Chr1_EL10_PGA_scaffold3 - View
Cicer arietinum L. Ca_19332_v3 Ca_LG6_v3 - View
Corylus avellana Haze_17733 Similar to PRAF1: PH, RCC1 and FYVE domains-containing protein 1 (Arabidopsis thaliana OX%3D3702) 7 + View
Citrus clementina Ciclev10000092m.g scaffold_5 - View
Ceratophyllum demersum CDE08G1678 6 - View
Carpinus fangiana Cfa018341 Cfa07 - View
Cardamine hirsuta CARHR070450 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain Chr2 + View
Carya illinoinensis CiPaw.16G014900 PTHR22870//PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION // REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Chr16 - View
Carya illinoinensis CiPaw.15G019100 PTHR22870//PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION // REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Chr15 - View
Chenopodium quinoa AUR62013542 HERC1: Probable E3 ubiquitin-protein ligase HERC1 C_Quinoa_Scaffold_1611 - View
Chenopodium quinoa AUR62026740 HERC1: Probable E3 ubiquitin-protein ligase HERC1 C_Quinoa_Scaffold_2081 + View
Capsella rubella Carub.0002s2381 PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED scaffold_2 + View
Davidia involucrata Dinv25840 GWHABJS00000011 - View
Davidia involucrata Dinv41102 GWHABJS00000002 - View
Durio zibethinus Duzib041G0094 NW_019167826.1 - View
Durio zibethinus Duzib116G0852 NW_019167949.1 - View
Eucalyptus grandis Eucgr.F02719 Chr06 + View
Erythranthe guttata Migut.C00991 scaffold_3 + View
Fragaria x ananassa FAN24G1363 PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Fvb2-2 + View
Fragaria x ananassa FAN15G2751 PTHR22870//PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION // REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Fvb2-4 - View
Fragaria x ananassa FAN27G0879 PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Fvb2-1 - View
Fragaria x ananassa FAN20G0720 PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Fvb2-3 + View
Fragaria vesca FvH4_2g14280 PTHR22870//PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION // REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Fvb2 - View
Gossypium hirsutum Gohir.A11G224808 KOG1427 - Uncharacterized conserved protein, contains RCC1 domain A11 - View
Gossypium hirsutum Gohir.A05G242300 PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED A05 - View
Glycine max Glyma.20G165400 PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Gm20 + View
Glycine max Glyma.02G084100 PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Gm02 - View
Glycine max Glyma.16G170500 PF00415//PF01363//PF08381//PF13713 - Regulator of chromosome condensation (RCC1) repeat (RCC1) // FYVE zinc finger (FYVE) // Transcription factor regulating root and shoot growth via Pin3 (BRX) // Transcription factor BRX N-terminal domain (BRX_N) Gm16 - View
Glycine max Glyma.10G226900 PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Gm10 - View
Lupinus albus Lalb_Chr02g0141371 PF00415//PF01363//PF08381//PF13713 - Regulator of chromosome condensation (RCC1) repeat (RCC1) // FYVE zinc finger (FYVE) // Transcription factor regulating root and shoot growth via Pin3 (BRX) // Transcription factor BRX N-terminal domain (BRX_N) Lalb_Chr02 + View
Lupinus albus Lalb_Chr06g0161501 PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Lalb_Chr06 + View
Lupinus albus Lalb_Chr21g0305391 PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Lalb_Chr21 + View
Lupinus albus Lalb_Chr03g0035171 PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Lalb_Chr03 + View
Lonicera japonica Lj7C368T11 GWHAAZE00000007 - View
Lactuca sativa Lsat_1_v5_gn_1_8600 PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Lsat_1_v8_lg_1 + View
Malus domestica MD10G1021300 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain Chr10 + View
Malus domestica MD05G1020200 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain Chr05 + View
Manihot esculenta Manes.02G177100 Chromosome02 - View
Manihot esculenta Manes.18G089900 Chromosome18 - View
Medicago truncatula Medtr1g099220 chromosome condensation regulator RCC1 repeat protein chr1 - View
Medicago truncatula Medtr6g034795 chromosome condensation regulator RCC1 repeat protein chr6 + View
Nelumbo nucifera Nn5g28683 chr5 - View
Punica granatum PGR042G2487 NC_045130.1 + View
Prunus persica Prupe.8G024300 PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Pp08 + View
Pisum sativum Psat6g194080 Transcription factor regulating root and shoot growth via Pin3 chr6LG2 - View
Populus trichocarpa Potri.005G190000 PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Chr05 - View
Populus trichocarpa Potri.002G070300 PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Chr02 + View
Phaseolus vulgaris Phvul.004G099000 PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Chr04 - View
Phaseolus vulgaris Phvul.007G078300 PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Chr07 + View
Quercus lobata QL02p024570 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr6g0276571 RcHm_v2.0_Chr6 - View
Salix brachista Sabra05G0145100 GWHAAZH00000005 - View
Salix brachista Sabra02G0054900 GWHAAZH00000002 + View
Simmondsia chinensis Sc02g0004290 GWHAASQ00000002 + View
Sechium edule Sed0027237 LG03 + View
Sechium edule Sed0009439 LG11 + View
Solanum lycopersicum Solyc04g071040.4 Regulator of chromosome condensation (RCC1) family protein (AHRD V3.3 *** A0A1P8B4Z7_ARATH) SL4.0ch04 - View
Solanum pennellii Sopen04g026980 PRAF1 | FUNCTIONS IN: chromatin binding, zinc ion binding, Ran GTPase binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation, RCC1 , Disease resistance/zinc finger/chromosome condensation-like region , Zinc finger, FYVE-type , Regulator of chromosome condensation/beta-lactamase-inhibitor protein II , Zinc finger, FYVE-related , Pleckstrin homology-type , Zinc finger, FYVE/PHD-type | BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain Spenn-ch04 - View
Solanum tuberosum PGSC0003DMG400000792 Ran GTPase binding protein ST4.03ch04 - View
Trochodendron aralioides TAR625G1001 group4 - View
Theobroma cacao Thecc.08G147600 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain Chromosome_8 - View
Tarenaya hassleriana THA.LOC104806852 uncharacterized protein LOC104806852 isoform X1 NW_010962392.1 - View
Trifolium pratense TPR.G36702 Tp57577_TGAC_v2_LG2 + View
Vigna mungo VMungo0720G0229 CM024071.1 - View
Vigna mungo VMungo0464G1565 CM024077.1 - View
Zea mays Zm00001eb075990 Zm00001e007456 2 - View