Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG9G11060 LG-9 - View
Aethionema arabicum Aa31LG1G27710 LG-1 - View
Acer truncatum Atru.chr9.2049 chr9 + View
Acer truncatum Atru.chr5.625 chr5 - View
Actinidia chinensis Actinidia01399 Lachesis_group23 + View
Actinidia chinensis Actinidia04214 Lachesis_group6 + View
Arabidopsis lyrata AL4G45640 scaffold_4 - View
Amaranthus hybridus Ah.12g052260 Protein SPA1-RELATED 2 AmaHy_arrow1_Scaffold_12 - View
Amaranthus hybridus Ah.05g179860 Protein SUPPRESSOR OF PHYA-105 1 (EC 2.7.-.-) AmaHy_arrow1_Scaffold_5 + View
Aquilegia oxysepala Aqoxy5G04129 CHR05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.DBE5X7 K16240 - protein suppressor of PHYA-105 1 (SPA1) arahy.Tifrunner.gnm1.Arahy.15 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.J2TPJU K16240 - protein suppressor of PHYA-105 1 (SPA1) arahy.Tifrunner.gnm1.Arahy.12 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.S6JTSH K16240 - protein suppressor of PHYA-105 1 (SPA1) arahy.Tifrunner.gnm1.Arahy.05 + View
Arabidopsis thaliana AT4G11110 SPA1-related 2 Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA2 primarily regulates seedling development in darkness and has little function in light-grown seedlings or adult plants. SPA1-related 2 (SPA2)%3B FUNCTIONS IN: protein binding%2C signal transducer activity%3B INVOLVED IN: protein amino acid phosphorylation%3B LOCATED IN: CUL4 RING ubiquitin ligase complex%2C heterotrimeric G-protein complex%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C WD40 repeat%2C conserved site (InterPro:IPR019775)%2C WD40 repeat (InterPro:IPR001680)%2C Serine/threonine-protein kinase-like domain (InterPro:IPR017442)%2C Protein kinase-like domain (InterPro:IPR011009)%2C G-protein beta WD-40 repeat%2C region (InterPro:IPR020472)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: SPA (suppressor of phyA-105) protein family (TAIR:AT2G46340.1)%3B Has 34047 Blast hits to 20982 proteins in 883 species: Archae - 38%3B Bacteria - 5461%3B Metazoa - 12841%3B Fungi - 7307%3B Plants - 4015%3B Viruses - 10%3B Other Eukaryotes - 4375 (source: NCBI BLink). Chr4 + View
Arabidopsis thaliana AT2G46340 SPA (suppressor of phyA-105) protein family Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA1 is a PHYA signaling intermediate%2C putative regulator of PHYA signaling pathway. Light responsive repressor of photomorphogenesis. Involved in regulating circadian rhythms and flowering time in plants. Under constant light%2C the abundance of SPA1 protein exhibited circadian regulation%2C whereas under constant darkness%2C SPA1 protein levels remained unchanged. In addition%2C the spa1-3 mutation slightly shortened circadian period of CCA1%2C TOC1/PRR1 and SPA1 transcript accumulation under constant light. SUPPRESSOR OF PHYA-105 1 (SPA1)%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C WD40 repeat%2C conserved site (InterPro:IPR019775)%2C WD40 repeat (InterPro:IPR001680)%2C Serine/threonine-protein kinase-like domain (InterPro:IPR017442)%2C Protein kinase-like domain (InterPro:IPR011009)%2C G-protein beta WD-40 repeat%2C region (InterPro:IPR020472)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: SPA1-related 2 (TAIR:AT4G11110.1)%3B Has 31438 Blast hits to 19748 proteins in 684 species: Archae - 32%3B Bacteria - 4770%3B Metazoa - 12431%3B Fungi - 6743%3B Plants - 3442%3B Viruses - 2%3B Other Eukaryotes - 4018 (source: NCBI BLink). Chr2 - View
Brassica carinata BcaC01g05076 ChrC01 + View
Brassica carinata BcaC02g12697 ChrC02 + View
Brassica carinata BcaB01g03223 ChrB01 + View
Brassica napus A03p25580 A03 - View
Brassica napus C03p30510 C03 - View
Brassica napus C04p01640 C04 + View
Brassica napus A05p01450 A05 + View
Brassica oleracea BolC4t21815H C4 + View
Brassica rapa BraA05t19142Z A05 + View
Beta vulgaris EL10Ac1g00310 K16240 - protein suppressor of PHYA-105 1 (SPA1) Chr1_EL10_PGA_scaffold3 + View
Camellia sinensis var. sinensis CSS0001264 PREDICTED: protein SUPPRESSOR OF PHYA-105 1 [Vitis vinifera] Chr3 - View
Camellia sinensis var. sinensis CSS0034663 PREDICTED: protein SPA1-RELATED 2-like [Sesamum indicum] Chr12 - View
Cicer arietinum L. Ca_24522_v3 Ca_LG8_v3 + View
Coffea canephora Cc02_g39010 Putative Protein SUPPRESSOR OF PHYA-105 1 chr2 - View
Coffea canephora Cc08_g15740 Putative Protein SPA1-RELATED 2 chr8 - View
Citrus clementina Ciclev10018610m.g scaffold_3 + View
Ceratophyllum demersum CDE03G0300 12 + View
Cardamine hirsuta CARHR255480 WD-40 repeat family protein Chr8 - View
Cardamine hirsuta CARHR141620 WD-40 repeat family protein Chr4 - View
Carya illinoinensis CiPaw.11G124200 K16240 - protein suppressor of PHYA-105 1 (SPA1) Chr11 + View
Carya illinoinensis CiPaw.12G085100 K16240 - protein suppressor of PHYA-105 1 (SPA1) Chr12 + View
Citrullus lanatus ClCG01G002030 Ubiquitin ligase protein cop1, putative CG_Chr01 + View
Carica papaya Cpa.g.sc194.3 supercontig_194 + View
Chenopodium quinoa AUR62023494 SPA1: Protein SUPPRESSOR OF PHYA-105 1 C_Quinoa_Scaffold_1606 + View
Chenopodium quinoa AUR62004454 SPA1: Protein SUPPRESSOR OF PHYA-105 1 C_Quinoa_Scaffold_4250 - View
Chenopodium quinoa AUR62010805 SPA2: Protein SPA1-RELATED 2 C_Quinoa_Scaffold_1280 - View
Capsella rubella Carub.0004s2904 K16240 - protein suppressor of PHYA-105 1 (SPA1) scaffold_4 - View
Capsella rubella Carub.0006s2993 PTHR22847:SF443 - PROTEIN SPA1-RELATED 2 scaffold_6 + View
Cucumis sativus L. CsaV3_5G002160 protein SPA1-RELATED 2 chr5 + View
Davidia involucrata Dinv38862 GWHABJS00000003 + View
Davidia involucrata Dinv37553 GWHABJS00000017 + View
Davidia involucrata Dinv43896 GWHABJS00000016 - View
Durio zibethinus Duzib138G0738 NW_019167893.1 - View
Durio zibethinus Duzib205G0698 NW_019168381.1 - View
Durio zibethinus Duzib068G0020 NW_019167838.1 - View
Durio zibethinus Duzib084G0870 NW_019167827.1 - View
Erythranthe guttata Migut.N01565 scaffold_14 + View
Erythranthe guttata Migut.E01232 scaffold_5 - View
Eutrema salsugineum Thhalv10001291m.g K16240 - protein suppressor of PHYA-105 1 (SPA1) scaffold_22 - View
Eutrema salsugineum Thhalv10028383m.g PTHR22847:SF443 - PROTEIN SPA1-RELATED 2 scaffold_3 - View
Fragaria x ananassa FAN08G3185 PTHR22847:SF443 - PROTEIN SPA1-RELATED 2 Fvb5-3 + View
Fragaria x ananassa FAN10G4145 KOG0316//KOG0641//KOG0643//KOG1332 - Conserved WD40 repeat-containing protein // WD40 repeat protein // Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) // Vesicle coat complex COPII, subunit SEC13 Fvb7-1 - View
Fragaria x ananassa FAN03G2006 K16240 - protein suppressor of PHYA-105 1 (SPA1) Fvb7-3 - View
Fragaria x ananassa FAN06G2569 K16240 - protein suppressor of PHYA-105 1 (SPA1) Fvb7-2 - View
Fragaria x ananassa FAN01G1132 KOG0316//KOG0641//KOG1332 - Conserved WD40 repeat-containing protein // WD40 repeat protein // Vesicle coat complex COPII, subunit SEC13 Fvb7-4 + View
Fragaria x ananassa FAN06G0030 K16240 - protein suppressor of PHYA-105 1 (SPA1) Fvb7-2 - View
Fragaria x ananassa FAN10G2995 KOG0316//KOG0641//KOG0643//KOG1332 - Conserved WD40 repeat-containing protein // WD40 repeat protein // Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) // Vesicle coat complex COPII, subunit SEC13 Fvb7-1 - View
Fragaria vesca FvH4_7g15970 K16240 - protein suppressor of PHYA-105 1 (SPA1) Fvb7 - View
Fragaria vesca FvH4_5g04010 PTHR22847:SF443 - PROTEIN SPA1-RELATED 2 Fvb5 - View
Gossypium hirsutum Gohir.A12G234800 K16240 - protein suppressor of PHYA-105 1 (SPA1) A12 - View
Gossypium hirsutum Gohir.A11G095100 K16240 - protein suppressor of PHYA-105 1 (SPA1) A11 - View
Gossypium hirsutum Gohir.D12G235900 K16240 - protein suppressor of PHYA-105 1 (SPA1) D12 - View
Gossypium hirsutum Gohir.D11G100100 K16240 - protein suppressor of PHYA-105 1 (SPA1) D11 - View
Glycine max Glyma.16G027200 K16240 - protein suppressor of PHYA-105 1 (SPA1) Gm16 + View
Glycine max Glyma.01G224200 K16240 - protein suppressor of PHYA-105 1 (SPA1) Gm01 - View
Glycine max Glyma.07G058200 K16240 - protein suppressor of PHYA-105 1 (SPA1) Gm07 + View
Glycine max Glyma.08G021200 KOG1033 - eIF-2alpha kinase PEK/EIF2AK3 Gm08 - View
Glycine max Glyma.11G018700 KOG0283//KOG0315//KOG0641//KOG0647//KOG1446 - WD40 repeat-containing protein // G-protein beta subunit-like protein (contains WD40 repeats) // WD40 repeat protein // mRNA export protein (contains WD40 repeats) // Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 Gm11 + View
Glycine max Glyma.05G214900 K16240 - protein suppressor of PHYA-105 1 (SPA1) Gm05 - View
Gossypium raimondii Gorai.007G106300 Chr07 - View
Gossypium raimondii Gorai.008G252600 Chr08 - View
Hydrangea macrophylla Hma1.2p1_0384F.1_g141100 Hma1.2p1_0384F.1 - View
Lupinus albus Lalb_Chr05g0224261 KOG1033 - eIF-2alpha kinase PEK/EIF2AK3 Lalb_Chr05 + View
Lupinus albus Lalb_Chr04g0254521 K16240 - protein suppressor of PHYA-105 1 (SPA1) Lalb_Chr04 + View
Lotus japonicus Lj3g0014884 K16240 - protein suppressor of PHYA-105 1 (SPA1) chr3 - View
Lotus japonicus LjContig00312_ERROPOS870357g0004768 PTHR22847:SF443 - PROTEIN SPA1-RELATED 2 Contig00312_ERROPOS870357 + View
Lonicera japonica Lj9C592T5 GWHAAZE00000009 + View
Lonicera japonica Lj8C211T0 GWHAAZE00000008 + View
Lactuca sativa Lsat_1_v5_gn_3_139181 Lsat_1_v8_lg_3 + View
Lactuca sativa Lsat_1_v5_gn_3_10081 Lsat_1_v8_lg_3 - View
Magnolia biondii MBI07_g20446_MAGBIO AED:0.15 Chr07 - View
Malus domestica MD07G1145300 SPA (suppressor of phyA-105) protein family Chr07 - View
Malus domestica MD06G1101400 SPA1-related 2 Chr06 - View
Malus domestica MD01G1076400 SPA (suppressor of phyA-105) protein family Chr01 - View
Malus domestica MD14G1121100 SPA1-related 2 Chr14 - View
Manihot esculenta Manes.01G248600 Chromosome01 + View
Medicago truncatula Medtr8g027985 ubiquitin ligase cop1, putative chr8 + View
Nicotiana tabacum Nitab4.5_0000223g0130 WD40 repeat, conserved site, Protein kinase-like domain, Protein kinase domain, WD40 repeat, WD40/YVTN repeat-like-containing domain, WD40-repeat-containing domain, Serine/threonine- / dual specificity protein kinase, catalytic domain Nitab4.5_0000223 - View
Olea europaea Oeu007849.1 chr15 + View
Petunia axillaris Peaxi162Scf00074g01219 Ubiquitin ligase protein cop1, putative isoform 6 Peaxi162Scf00074 + View
Punica granatum PGR031G2212 NC_045127.1 - View
Prunus persica Prupe.5G114800 Pp05 - View
Prunus persica Prupe.2G183800 Pp02 - View
Pisum sativum Psat4g159720 Protein kinase domain chr4LG4 - View
Pisum sativum Psat2g185080 G protein beta WD-40 repeat signature chr2LG1 - View
Papaver somniferum PSO384G4892 NC_039368.1 + View
Papaver somniferum PSO135G1049 NW_020631041.1 - View
Populus trichocarpa Potri.014G095300 K16240 - protein suppressor of PHYA-105 1 (SPA1) Chr14 - View
Populus trichocarpa Potri.003G137100 KOG1033 - eIF-2alpha kinase PEK/EIF2AK3 Chr03 - View
Populus trichocarpa Potri.001G094500 K16240 - protein suppressor of PHYA-105 1 (SPA1) Chr01 + View
Phaseolus vulgaris Phvul.010G111100 K16240 - protein suppressor of PHYA-105 1 (SPA1) Chr10 - View
Phaseolus vulgaris Phvul.002G296004 PTHR22847:SF443 - PROTEIN SPA1-RELATED 2 Chr02 - View
Phaseolus vulgaris Phvul.002G162800 PTHR22847:SF443 - PROTEIN SPA1-RELATED 2 Chr02 - View
Quercus lobata QL02p031492 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr1g0358871 RcHm_v2.0_Chr1 - View
Rosa chinensis RcHm_v2.0_Chr7g0195501 RcHm_v2.0_Chr7 + View
Rhododendron simsii Rhsim02G0240800 chr02 - View
Salix brachista Sabra14G0069800 GWHAAZH00000014 - View
Salix brachista Sabra01G0070600 GWHAAZH00000001 + View
Salix brachista Sabra03G0098600 GWHAAZH00000003 - View
Simmondsia chinensis Sc22g0005190 GWHAASQ00000022 + View
Simmondsia chinensis Sc23g0002250 GWHAASQ00000023 + View
Sechium edule Sed0013567 LG01 + View
Sechium edule Sed0012661 LG05 + View
Solanum lycopersicum Solyc08g081990.3 protein SPA1-RELATED 2-like (AHRD V3.3 *** A0A2I4DQ28_9ROSI) SL4.0ch08 - View
Solanum lycopersicum Solyc10g011690.3 protein SPA1-RELATED 2-like (AHRD V3.3 *** A0A2I4HSY6_9ROSI) SL4.0ch10 + View
Schrenkiella parvula Sp6g06310 PTHR22847:SF443 - PROTEIN SPA1-RELATED 2 ch6-1 - View
Schrenkiella parvula Sp4g28380 K16240 - protein suppressor of PHYA-105 1 (SPA1) ch4-6 - View
Solanum pennellii Sopen08g030290 Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA2 primarily regulates seedling development in darkness and has little function in light-grown seedlings or adult plants. | SPA1-related 2 (SPA2) | FUNCTIONS IN: protein binding, signal transducer activity | INVOLVED IN: protein amino acid phosphorylation | LOCATED IN: CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , WD40 repeat, conserved site , WD40 repeat , Serine/threonine-protein kinase-like domain , Protein kinase-like domain , G-protein beta WD-40 repeat, region , WD40 repeat-like-containing domain , Protein kinase, catalytic domain , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: SPA (suppressor of phyA-105) protein family Spenn-ch08 - View
Solanum pennellii Sopen10g005500 Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA1 is a PHYA signaling intermediate, putative regulator of PHYA signaling pathway. Light responsive repressor of photomorphogenesis. Involved in regulating circadian rhythms and flowering time in plants. Under constant light, the abundance of SPA1 protein exhibited circadian regulation, whereas under constant darkness, SPA1 protein levels remained unchanged. In addition, the spa1-3 mutation slightly shortened circadian period of CCA1, TOC1/PRR1 and SPA1 transcript accumulation under constant light. | SUPPRESSOR OF PHYA-105 1 (SPA1) | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , WD40 repeat, conserved site , WD40 repeat , Serine/threonine-protein kinase-like domain , Protein kinase-like domain , G-protein beta WD-40 repeat, region , WD40 repeat-like-containing domain , Protein kinase, catalytic domain , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: SPA1-related 2 Spenn-ch10 + View
Solanum tuberosum PGSC0003DMG400012163 Ubiquitin ligase protein cop1 ST4.03ch08 - View
Solanum tuberosum PGSC0003DMG400019379 Ubiquitin ligase protein cop1 ST4.03ch10 + View
Selenicereus undatus Hund11408 Scaffold_10417 + View
Trochodendron aralioides TAR374G0912 group12 - View
Trochodendron aralioides TAR375G1095 group15 - View
Theobroma cacao Thecc.01G346900 SPA family protein Chromosome_1 + View
Theobroma cacao Thecc.03G292700 Ubiquitin ligase protein cop1 Chromosome_3 - View
Tarenaya hassleriana THA.LOC104802058 protein SUPPRESSOR OF PHYA-105 1-like NW_010970490.1 - View
Tarenaya hassleriana THA.LOC104814910 protein SPA1-RELATED 2 NW_010960187.1 - View
Vigna mungo VMungo1215G2133 CM024074.1 + View
Vigna mungo VMungo0331G1410 CM024078.1 + View
Vigna mungo VMungo0251G1858 CM024069.1 - View
Vitis vinifera GSVIVG01019492001 chr2 - View
Vitis vinifera GSVIVG01027054001 chr15 + View