Gene: FAN10G2995
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN10G2995
- Transcript Identifier FAN10G2995.1
- Gene Type Coding gene
- Location Fvb7-1 : 18422051-18426201 : negative
Gene Family Information
- ID HOM05D000684
- #Genes/#Species 835/100
- Phylogenetic origin
- ID ORTHO05D000688
- #Genes/#Species 673/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id maker-Fvb7-1-snap-gene-184.41.v1.0.a1
- pacid 50485687
Descriptions
- Description KOG0316//KOG0641//KOG0643//KOG1332 - Conserved WD40 repeat-containing protein // WD40 repeat protein // Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) // Vesicle coat complex COPII, subunit SEC13
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009585 | ISO | PLAZA Integrative Orthology | red, far-red light phototransduction | AT2G46340 |
| GO:0010114 | ISO | PLAZA Integrative Orthology | response to red light | AT2G46340 |
| GO:2000028 | ISO | PLAZA Integrative Orthology | regulation of photoperiodism, flowering | AT2G46340 |
| GO:0010100 | ISO | PLAZA Integrative Orthology | negative regulation of photomorphogenesis | AT2G46340 |
| GO:0009658 | ISO | PLAZA Integrative Orthology | chloroplast organization | AT2G46340 |
| GO:0009637 | ISO | PLAZA Integrative Orthology | response to blue light | AT2G46340 |
| GO:0010017 | ISO | PLAZA Integrative Orthology | red or far-red light signaling pathway | AT2G46340 |
| GO:0048575 | ISO | PLAZA Integrative Orthology | short-day photoperiodism, flowering | AT2G46340 |
| GO:0010218 | ISO | PLAZA Integrative Orthology | response to far red light | AT2G46340 |
| GO:0009640 | IEA | InterPro | photomorphogenesis | |
| GO:0006468 | IEA | InterPro | protein phosphorylation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0042802 | ISO | PLAZA Integrative Orthology | identical protein binding | AT2G46340 |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004672 | IEA | InterPro | protein kinase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016604 | ISO | PLAZA Integrative Orthology | nuclear body | AT2G46340 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT2G46340 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001680 | WD40 repeat |
| IPR020472 | G-protein beta WD-40 repeat |
| IPR011009 | Protein kinase-like domain superfamily |
| IPR000719 | Protein kinase domain |
| IPR044630 | WD-repeat protein SPA1/2/3/4 |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| IPR036322 | WD40-repeat-containing domain superfamily |
| Mapman id | Description |
|---|---|
| 19.2.2.8.3.4.4.2 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL4-DDB1 E3 ubiquitin ligase complexes.substrate adaptor activities.COP1-SPA substrate adaptor subcomplex.regulator component SPA |
| 26.1.1.3.2 | External stimuli response.light.red/far red light.substrate adaptor module of CUL4-DDB1 ubiquitin ligase complex.regulator component SPA |