Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Dinv38307 GWHABJS00000016 + View
Dinv44401 GWHABJS00000014 + View
Dinv40302 GWHABJS00000005 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G9370 LG-11 + View
Acer truncatum Atru.chr4.2797 chr4 + View
Acer truncatum Atru.chr2.365 chr2 - View
Amaranthus hybridus Ah.04g160350 Protein ALWAYS EARLY 2 (AtALY2) AmaHy_arrow1_Scaffold_4 - View
Aquilegia oxysepala Aqoxy2G03054 CHR02 + View
Aquilegia oxysepala Aqoxy5G00660 CHR05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.01A8MA PTHR21689:SF3 - PROTEIN ALWAYS EARLY 1-RELATED arahy.Tifrunner.gnm1.Arahy.06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.FE8GQY PTHR21689:SF3 - PROTEIN ALWAYS EARLY 1-RELATED arahy.Tifrunner.gnm1.Arahy.16 - View
Arabidopsis thaliana AT3G05380 ALWAYS EARLY 2 ALWAYS EARLY 2 (ALY2)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%2C nucleic acid binding%3B CONTAINS InterPro DOMAIN/s: Tudor domain (InterPro:IPR002999)%2C DIRP (InterPro:IPR010561)%3B BEST Arabidopsis thaliana protein match is: DIRP %3BMyb-like DNA-binding domain (TAIR:AT5G27610.1)%3B Has 3515 Blast hits to 2611 proteins in 325 species: Archae - 0%3B Bacteria - 509%3B Metazoa - 1706%3B Fungi - 322%3B Plants - 232%3B Viruses - 9%3B Other Eukaryotes - 737 (source: NCBI BLink). ALWAYS EARLY 2 (ALY2)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B CONTAINS InterPro DOMAIN/s: SANT%2C DNA-binding (InterPro:IPR001005)%2C DIRP (InterPro:IPR010561)%3B BEST Arabidopsis thaliana protein match is: DIRP %3BMyb-like DNA-binding domain (TAIR:AT5G27610.1). Chr3 + View
Arabidopsis thaliana AT5G27610 protein ALWAYS EARLY 1 ALWAYS EARLY 1 (ALY1)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: sperm cell%2C male gametophyte%2C flower%2C pollen tube%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: SANT%2C DNA-binding (InterPro:IPR001005)%2C DIRP (InterPro:IPR010561)%3B BEST Arabidopsis thaliana protein match is: DIRP %3BMyb-like DNA-binding domain (TAIR:AT3G05380.4)%3B Has 727 Blast hits to 616 proteins in 109 species: Archae - 0%3B Bacteria - 13%3B Metazoa - 449%3B Fungi - 28%3B Plants - 134%3B Viruses - 1%3B Other Eukaryotes - 102 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaC09g47821 ChrC09 + View
Brassica carinata BcaC05g30129 ChrC05 - View
Brassica carinata BcaC03g17793 ChrC03 + View
Brassica napus BNapus_Darmor_BZH_scaffold_114p00150 BNapus_Darmor_BZH_scaffold_114 - View
Brassica napus C07p40950 C07 + View
Brassica napus C02p58190 C02 + View
Brassica napus C05p61840 C05 - View
Brassica napus A02p38680 A02 + View
Brassica napus A06p37400 A06 - View
Brassica oleracea BolC2t11886H C2 + View
Brassica oleracea BolC7t44625H C7 + View
Brassica oleracea BolC1t05698H C1 - View
Brassica oleracea BolC5t34844H C5 - View
Brassica rapa BraA02t08844Z A02 + View
Beta vulgaris EL10Ac4g09373 PTHR21689//PTHR21689:SF3 - LIN-9 // PROTEIN ALWAYS EARLY 1-RELATED Chr4_EL10_PGA_scaffold1 - View
Camellia sinensis var. sinensis CSS0013812 unnamed protein product [Vitis vinifera] Chr3 - View
Cannabis sativa CANSAT54G2574 NC_044375.1 - View
Cicer arietinum L. Ca_10116_v3 Ca_LG4_v3 + View
Corylus avellana Haze_04176 Similar to ALY2: Protein ALWAYS EARLY 2 (Arabidopsis thaliana OX%3D3702) 2 - View
Citrus clementina Ciclev10006326m.g scaffold_9 - View
Citrus clementina Ciclev10000065m.g scaffold_5 + View
Carpinus fangiana Cfa006601 Cfa02 + View
Cardamine hirsuta CARHR186140 Always early, putative Chr6 + View
Cardamine hirsuta CARHR079720 Protein ALWAYS EARLY 2 Chr3 + View
Carya illinoinensis CiPaw.01G150700 PTHR21689:SF2 - PROTEIN LIN-9 HOMOLOG Chr01 - View
Carya illinoinensis CiPaw.07G018900 PTHR21689//PTHR21689:SF3 - LIN-9 // PROTEIN ALWAYS EARLY 1-RELATED Chr07 + View
Citrullus lanatus ClCG02G015590 Protein ALWAYS EARLY 3 CG_Chr02 - View
Carica papaya Cpa.g.sc48.70 supercontig_48 + View
Carica papaya Cpa.g.sc16.151 supercontig_16 + View
Chenopodium quinoa AUR62005159 ALY3: Protein ALWAYS EARLY 3 C_Quinoa_Scaffold_3820 - View
Chenopodium quinoa AUR62000808 ALY1: Protein ALWAYS EARLY 1 C_Quinoa_Scaffold_2088 + View
Capsella rubella Carub.0003s0466 PTHR21689:SF3 - PROTEIN ALWAYS EARLY 1-RELATED scaffold_3 + View
Capsella rubella Carub.0006s2498 PTHR21689:SF3 - PROTEIN ALWAYS EARLY 1-RELATED scaffold_6 - View
Cucumis sativus L. CsaV3_3G014420 protein ALWAYS EARLY 3 isoform X1 chr3 + View
Cucumis sativus L. CsaV3_2G006500 Always early, putative isoform 3 chr2 + View
Durio zibethinus Duzib106G0035 NW_019168492.1 - View
Durio zibethinus Duzib177G0446 NW_019168004.1 + View
Durio zibethinus Duzib212G0110 NW_019168026.1 - View
Erigeron canadensis ECA236G2062 Conyza_canadensis_scaffold:3 + View
Erythranthe guttata Migut.G00183 scaffold_7 - View
Erythranthe guttata Migut.N00106 scaffold_14 - View
Eutrema salsugineum Thhalv10019971m.g PTHR21689:SF3 - PROTEIN ALWAYS EARLY 1-RELATED scaffold_13 - View
Eutrema salsugineum Thhalv10003596m.g PTHR21689:SF3 - PROTEIN ALWAYS EARLY 1-RELATED scaffold_6 - View
Fragaria x ananassa FAN05G4497 PTHR21689:SF3 - PROTEIN ALWAYS EARLY 1-RELATED Fvb6-3 - View
Fragaria x ananassa FAN12G2891 PTHR21689:SF2 - PROTEIN LIN-9 HOMOLOG Fvb4-3 + View
Fragaria x ananassa FAN09G1699 PTHR21689:SF3 - PROTEIN ALWAYS EARLY 1-RELATED Fvb6-2 - View
Fragaria x ananassa FAN02G4081 PTHR21689//PTHR21689:SF3 - LIN-9 // PROTEIN ALWAYS EARLY 1-RELATED Fvb6-4 + View
Fragaria x ananassa FAN22G0525 PTHR21689//PTHR21689:SF2 - LIN-9 // PROTEIN LIN-9 HOMOLOG Fvb4-1 + View
Fragaria x ananassa FAN07G1913 PTHR21689:SF2 - PROTEIN LIN-9 HOMOLOG Fvb4-4 - View
Fragaria x ananassa FAN12G3732 PTHR21689//PTHR21689:SF2 - LIN-9 // PROTEIN LIN-9 HOMOLOG Fvb4-3 - View
Fragaria x ananassa FAN14G1216 PTHR21689//PTHR21689:SF3 - LIN-9 // PROTEIN ALWAYS EARLY 1-RELATED Fvb6-1 - View
Fragaria x ananassa FAN17G1019 PTHR21689//PTHR21689:SF2 - LIN-9 // PROTEIN LIN-9 HOMOLOG Fvb4-2 - View
Fragaria vesca FvH4_6g06170 PTHR21689//PTHR21689:SF3 - LIN-9 // PROTEIN ALWAYS EARLY 1-RELATED Fvb6 + View
Gossypium hirsutum Gohir.D11G311600 PTHR21689:SF3 - PROTEIN ALWAYS EARLY 1-RELATED D11 - View
Gossypium hirsutum Gohir.A13G108100 PTHR21689:SF3 - PROTEIN ALWAYS EARLY 1-RELATED A13 + View
Gossypium hirsutum Gohir.D13G111050 PTHR21689:SF3 - PROTEIN ALWAYS EARLY 1-RELATED D13 + View
Gossypium hirsutum Gohir.A11G295300 PTHR21689:SF3 - PROTEIN ALWAYS EARLY 1-RELATED A11 + View
Glycine max Glyma.03G237000 PTHR21689:SF3 - PROTEIN ALWAYS EARLY 1-RELATED Gm03 - View
Glycine max Glyma.10G153800 PTHR21689:SF3 - PROTEIN ALWAYS EARLY 1-RELATED Gm10 - View
Glycine max Glyma.17G024600 PTHR21689//PTHR21689:SF2 - LIN-9 // PROTEIN LIN-9 HOMOLOG Gm17 + View
Glycine max Glyma.07G249800 PTHR21689//PTHR21689:SF2 - LIN-9 // PROTEIN LIN-9 HOMOLOG Gm07 - View
Glycine max Glyma.19G234700 Gm19 - View
Glycine max Glyma.20G234500 PTHR21689:SF3 - PROTEIN ALWAYS EARLY 1-RELATED Gm20 + View
Gossypium raimondii Gorai.007G342200 Chr07 - View
Gossypium raimondii Gorai.013G124600 Chr13 + View
Lupinus albus Lalb_Chr02g0148211 PTHR21689:SF3 - PROTEIN ALWAYS EARLY 1-RELATED Lalb_Chr02 - View
Lupinus albus Lalb_Chr15g0077241 PTHR21689:SF3 - PROTEIN ALWAYS EARLY 1-RELATED Lalb_Chr15 + View
Lotus japonicus Lj1g0025505 PTHR21689//PTHR21689:SF3 - LIN-9 // PROTEIN ALWAYS EARLY 1-RELATED chr1 + View
Lotus japonicus Lj4g0021619 PTHR21689//PTHR21689:SF2 - LIN-9 // PROTEIN LIN-9 HOMOLOG chr4 + View
Lotus japonicus Lj5g0019884 PTHR21689:SF3 - PROTEIN ALWAYS EARLY 1-RELATED chr5 - View
Lonicera japonica Lj6A672G23 GWHAAZE00000006 + View
Lactuca sativa Lsat_1_v5_gn_9_86960 KOG1019 - Retinoblastoma pathway protein LIN-9/chromatin-associated protein Aly Lsat_1_v8_lg_9 + View
Malus domestica MD12G1217500 DNA binding Chr12 - View
Malus domestica MD13G1170900 DNA binding Chr13 - View
Malus domestica MD16G1172500 DNA binding Chr16 - View
Malus domestica MD04G1203700 DNA binding Chr04 - View
Manihot esculenta Manes.15G014400 Chromosome15 - View
Manihot esculenta Manes.09G168000 Chromosome09 + View
Medicago truncatula Medtr4g119390 always EARLY-like protein chr4 + View
Medicago truncatula Medtr1g083040 always EARLY-like protein chr1 + View
Nelumbo nucifera Nn4g25956 chr4 + View
Punica granatum PGR004G1216 NC_045131.1 - View
Punica granatum PGR031G3250 NC_045127.1 - View
Punica granatum PGR083G0405 NC_045133.1 - View
Prunus persica Prupe.1G139300 Pp01 - View
Prunus persica Prupe.6G323800 Pp06 - View
Pisum sativum Psat3g011560 DIRP chr3LG5 + View
Papaver somniferum PSO170G4751 NC_039360.1 + View
Populus trichocarpa Potri.013G020500 PTHR21689:SF3 - PROTEIN ALWAYS EARLY 1-RELATED Chr13 - View
Populus trichocarpa Potri.010G023201 PTHR21689//PTHR21689:SF2 - LIN-9 // PROTEIN LIN-9 HOMOLOG Chr10 - View
Populus trichocarpa Potri.005G029000 PTHR21689:SF3 - PROTEIN ALWAYS EARLY 1-RELATED Chr05 - View
Phaseolus vulgaris Phvul.007G179500 PTHR21689:SF3 - PROTEIN ALWAYS EARLY 1-RELATED Chr07 - View
Phaseolus vulgaris Phvul.003G103001 PTHR21689:SF2 - PROTEIN LIN-9 HOMOLOG Chr03 - View
Quercus lobata QL06p008270 6 + View
Quercus lobata QL03p007389 3 + View
Rosa chinensis RcHm_v2.0_Chr3g0455181 RcHm_v2.0_Chr3 + View
Rosa chinensis RcHm_v2.0_Chr4g0421571 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim04G0219400 chr04 + View
Salix brachista Sabra13G0023000 GWHAAZH00000013 - View
Salix brachista Sabra05G0033800 GWHAAZH00000005 - View
Simmondsia chinensis Sc09g0003120 GWHAASQ00000009 - View
Sechium edule Sed0027689 LG12 - View
Sechium edule Sed0008965 LG11 + View
Sapria himalayana SHI18127 scaffold26_7557582 - View
Schrenkiella parvula Sp3g04240 PTHR21689//PTHR21689:SF3 - LIN-9 // PROTEIN ALWAYS EARLY 1-RELATED ch3-1 + View
Schrenkiella parvula Sp2g20770 PTHR21689//PTHR21689:SF3 - LIN-9 // PROTEIN ALWAYS EARLY 1-RELATED ch2-4 + View
Selenicereus undatus Hund07078 Scaffold_33676 + View
Trochodendron aralioides TAR633G0752 group2 + View
Theobroma cacao Thecc.04G280900 Always early Chromosome_4 + View
Tarenaya hassleriana THA.LOC104818705 protein ALWAYS EARLY 2-like NW_010966177.1 + View
Trifolium pratense TPR.G6092 Tp57577_TGAC_v2_LG1 - View
Tripterygium wilfordii TWI12G0026 NC_052243.1 + View
Tripterygium wilfordii TWI56G1184 NC_052242.1 - View
Vaccinium macrocarpon vmacro04970 Similar to ALY2: Protein ALWAYS EARLY 2 (Arabidopsis thaliana OX%3D3702) chr12_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro08123 Similar to ALY3: Protein ALWAYS EARLY 3 (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G2815 CM024074.1 - View
Vigna mungo VMungo0720G2192 CM024071.1 - View
Vitis vinifera GSVIVG01000089001 chr14 + View