Gene: AT5G27610

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G27610
  • Transcript Identifier AT5G27610.1
  • Gene Type Coding gene
  • Location Chr5 : 9764852-9769706 : positive

Gene Family Information

  • ID HOM05D001965
  • #Genes/#Species 336/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G27610.1
  • symbol ALY1
  • Alias ATALY1,ARABIDOPSIS THALIANA ALWAYS EARLY 1
  • full_name ALWAYS EARLY 1
  • uniprot Q6A331

Descriptions

  • Description protein ALWAYS EARLY 1
  • Computational description ALWAYS EARLY 1 (ALY1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), DIRP (InterPro:IPR010561); BEST Arabidopsis thaliana protein match is: DIRP ;Myb-like DNA-binding domain (TAIR:AT3G05380.4); Has 727 Blast hits to 616 proteins in 109 species: Archae - 0; Bacteria - 13; Metazoa - 449; Fungi - 28; Plants - 134; Viruses - 1; Other Eukaryotes - 102 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
Gene Ontologytranscription, DNA-templated
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0006357
IBA
Gene Ontologyregulation of transcription by RNA polymerase II1
GO:0000003
IBA
Gene Ontologyreproduction1
GO:0006406
IBA
Gene OntologymRNA export from nucleus1
GO:0051726
IBA
Gene Ontologyregulation of cell cycle1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IBA
Gene OntologymRNA binding1
GO:0003677
IBA
Gene OntologyDNA binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus1
GO:0017053
IEA
Gene Ontologytranscription repressor complex
GO:0017053
IEA
InterProtranscription repressor complex
GO:0005654
IBA
Gene Ontologynucleoplasm1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010561 Protein LIN-9/Protein ALWAYS EARLY
IPR033471 DIRP domain
IPR001005 SANT/Myb domain
IPR028306 Protein ALWAYS EARLY, plant
IPR009057 Homeobox-like domain superfamily
Mapman id Description
13.1.2.1.1 Cell cycle organisation.cell cycle control.regulation.MuvB/DREAM regulatory complexes.component ALY