Gene: AT3G05380

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G05380
  • Transcript Identifier AT3G05380.4
  • Gene Type Coding gene
  • Location Chr3 : 1540562-1546139 : positive

Gene Family Information

  • ID HOM05D001965
  • #Genes/#Species 336/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G05380.4
  • symbol ALY2
  • Alias ATALY2,ARABIDOPSIS THALIANA ALWAYS EARLY 2
  • uniprot Q6A333

Descriptions

  • Description ALWAYS EARLY 2
  • Computational description ALWAYS EARLY 2 (ALY2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity, nucleic acid binding; CONTAINS InterPro DOMAIN/s: Tudor domain (InterPro:IPR002999), DIRP (InterPro:IPR010561); BEST Arabidopsis thaliana protein match is: DIRP ;Myb-like DNA-binding domain (TAIR:AT5G27610.1); Has 3515 Blast hits to 2611 proteins in 325 species: Archae - 0; Bacteria - 509; Metazoa - 1706; Fungi - 322; Plants - 232; Viruses - 9; Other Eukaryotes - 737 (source: NCBI BLink).
  • Computational description ALWAYS EARLY 2 (ALY2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), DIRP (InterPro:IPR010561); BEST Arabidopsis thaliana protein match is: DIRP ;Myb-like DNA-binding domain (TAIR:AT5G27610.1).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
Gene Ontologytranscription, DNA-templated
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0000003
IBA
Gene Ontologyreproduction1
GO:0051726
IBA
Gene Ontologyregulation of cell cycle1
GO:0006357
IBA
Gene Ontologyregulation of transcription by RNA polymerase II1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding2
GO:0003677
IBA
Gene OntologyDNA binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0017053
IEA
Gene Ontologytranscription repressor complex
GO:0017053
IEA
InterProtranscription repressor complex
GO:0005654
IBA
Gene Ontologynucleoplasm1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010561 Protein LIN-9/Protein ALWAYS EARLY
IPR028306 Protein ALWAYS EARLY, plant
IPR033471 DIRP domain
IPR009057 Homeobox-like domain superfamily
IPR002999 Tudor domain
Mapman id Description
13.1.2.1.1 Cell cycle organisation.cell cycle control.regulation.MuvB/DREAM regulatory complexes.component ALY