Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G2930 LG-3 - View
Acer truncatum Atru.chr12.826 chr12 - View
Actinidia chinensis Actinidia06744 Lachesis_group22 - View
Arabidopsis lyrata AL3G21690 scaffold_3 - View
Avicennia marina MSTRG.8136 ScioBoG_102841_HRSCAF_103114 + View
Aquilegia oxysepala Aqoxy1G01177 CHR01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.KI2IUQ PTHR12537//PTHR12537:SF71 - RNA BINDING PROTEIN PUMILIO-RELATED // PUMILIO HOMOLOG 4 arahy.Tifrunner.gnm1.Arahy.09 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.YE7AHB PTHR12537//PTHR12537:SF71 - RNA BINDING PROTEIN PUMILIO-RELATED // PUMILIO HOMOLOG 4 arahy.Tifrunner.gnm1.Arahy.19 + View
Arabidopsis thaliana AT3G10360 pumilio 4 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts. pumilio 4 (PUM4)%3B FUNCTIONS IN: RNA binding%2C binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: male gametophyte%2C cultured cell%2C pollen tube%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%3B CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313)%2C Nucleic acid binding NABP (InterPro:IPR012940)%2C Armadillo-like helical (InterPro:IPR011989)%2C Armadillo-type fold (InterPro:IPR016024)%3B BEST Arabidopsis thaliana protein match is: pumilio 1 (TAIR:AT2G29200.1)%3B Has 3756 Blast hits to 2007 proteins in 241 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 783%3B Fungi - 1274%3B Plants - 892%3B Viruses - 0%3B Other Eukaryotes - 803 (source: NCBI BLink). Chr3 - View
Amborella trichopoda ATR0680G177 AmTr_v1.0_scaffold00009 - View
Brassica carinata BcaC05g29474 ChrC05 + View
Brassica napus A05p38790 A05 + View
Brassica napus C05p57810 C05 + View
Camellia sinensis var. sinensis CSS0048192 hypothetical protein PRUPE_ppa000731mg [Prunus persica] Chr1 + View
Capsicum annuum CAN.G321.36 PGAv.1.6.scaffold321 - View
Cannabis sativa CANSAT56G0988 NC_044371.1 - View
Cicer arietinum L. Ca_10550_v3 Ca_LG4_v3 + View
Corylus avellana Haze_16846 Similar to APUM4: Pumilio homolog 4 (Arabidopsis thaliana OX%3D3702) 11 - View
Citrus clementina Ciclev10030594m.g scaffold_4 + View
Carpinus fangiana Cfa001685 Cfa01 + View
Cardamine hirsuta CARHR084840 pumilio 4 Chr3 - View
Carya illinoinensis CiPaw.01G270100 PTHR12537:SF71 - PUMILIO HOMOLOG 4 Chr01 + View
Citrullus lanatus ClCG05G021150 pumilio 4 LENGTH=1003 CG_Chr05 - View
Cucumis melo MELO3C012411.2 pumilio homolog 4 chr10 - View
Carica papaya Cpa.g.sc53.108 supercontig_53 - View
Capsella rubella Carub.0003s0954 PTHR12537//PTHR12537:SF71 - RNA BINDING PROTEIN PUMILIO-RELATED // PUMILIO HOMOLOG 4 scaffold_3 - View
Cucumis sativus L. CsaV3_5G036100 pumilio homolog 4 chr5 + View
Daucus carota DCAR_006423 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv31215 GWHABJS00000004 + View
Davidia involucrata Dinv36407 GWHABJS00000009 - View
Durio zibethinus Duzib128G0492 NW_019168481.1 - View
Durio zibethinus Duzib114G0399 NW_019167926.1 - View
Erigeron canadensis ECA238G3606 Conyza_canadensis_scaffold:6 + View
Eucalyptus grandis Eucgr.J01068 Chr10 + View
Erythranthe guttata Migut.F01724 scaffold_6 + View
Eutrema salsugineum Thhalv10019985m.g PTHR12537:SF71 - PUMILIO HOMOLOG 4 scaffold_13 + View
Fragaria x ananassa FAN10G2666 PTHR12537//PTHR12537:SF71 - RNA BINDING PROTEIN PUMILIO-RELATED // PUMILIO HOMOLOG 4 Fvb7-1 + View
Fragaria x ananassa FAN06G1094 PTHR12537//PTHR12537:SF71 - RNA BINDING PROTEIN PUMILIO-RELATED // PUMILIO HOMOLOG 4 Fvb7-2 + View
Fragaria x ananassa FAN03G2168 PTHR12537//PTHR12537:SF71 - RNA BINDING PROTEIN PUMILIO-RELATED // PUMILIO HOMOLOG 4 Fvb7-3 - View
Fragaria x ananassa FAN01G1297 PTHR12537//PTHR12537:SF71 - RNA BINDING PROTEIN PUMILIO-RELATED // PUMILIO HOMOLOG 4 Fvb7-4 - View
Fragaria x ananassa FAN06G0037 PTHR12537:SF71 - PUMILIO HOMOLOG 4 Fvb7-2 + View
Fragaria x ananassa FAN10G0639 PTHR12537:SF71 - PUMILIO HOMOLOG 4 Fvb7-1 + View
Fragaria vesca FvH4_7g18910 PTHR12537//PTHR12537:SF71 - RNA BINDING PROTEIN PUMILIO-RELATED // PUMILIO HOMOLOG 4 Fvb7 + View
Gossypium hirsutum Gohir.A05G411800 PTHR12537//PTHR12537:SF71 - RNA BINDING PROTEIN PUMILIO-RELATED // PUMILIO HOMOLOG 4 A05 + View
Gossypium hirsutum Gohir.D04G004200 PTHR12537//PTHR12537:SF71 - RNA BINDING PROTEIN PUMILIO-RELATED // PUMILIO HOMOLOG 4 D04 - View
Glycine max Glyma.10G209000 PTHR12537//PTHR12537:SF71 - RNA BINDING PROTEIN PUMILIO-RELATED // PUMILIO HOMOLOG 4 Gm10 + View
Glycine max Glyma.20G181600 PTHR12537//PTHR12537:SF71 - RNA BINDING PROTEIN PUMILIO-RELATED // PUMILIO HOMOLOG 4 Gm20 - View
Gossypium raimondii Gorai.012G005400 Chr12 - View
Helianthus annuus HanXRQChr14g0456671 Putative nucleic acid binding NABP; Armadillo-type fold HanXRQChr14 + View
Lupinus albus Lalb_Chr02g0152171 PTHR12537:SF71 - PUMILIO HOMOLOG 4 Lalb_Chr02 + View
Lupinus albus Lalb_Chr21g0313771 PTHR12537:SF71 - PUMILIO HOMOLOG 4 Lalb_Chr21 + View
Lupinus albus Lalb_Chr06g0170351 PTHR12537//PTHR12537:SF71 - RNA BINDING PROTEIN PUMILIO-RELATED // PUMILIO HOMOLOG 4 Lalb_Chr06 + View
Lotus japonicus Lj5g0012554 PTHR12537:SF71 - PUMILIO HOMOLOG 4 chr5 - View
Lonicera japonica Lj2C18G5 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_2_112881 PTHR12537:SF71 - PUMILIO HOMOLOG 4 Lsat_1_v8_lg_2 + View
Malus domestica MD01G1104900 pumilio 4 Chr01 + View
Malus domestica MD07G1171400 pumilio 4 Chr07 + View
Manihot esculenta Manes.07G095500 Chromosome07 + View
Manihot esculenta Manes.10G049000 Chromosome10 - View
Medicago truncatula Medtr1g094630 pumilio-family RNA-binding repeatprotein chr1 + View
Nelumbo nucifera Nn2g13755 chr2 - View
Nelumbo nucifera Nn2g11554 chr2 - View
Olea europaea Oeu020825.2 chr13 - View
Olea europaea Oeu000809.1 chr19 + View
Oryza sativa ssp. japonica Os02g0819300 Hypothetical conserved gene. chr02 + View
Punica granatum PGR044G1034 NC_045134.1 + View
Prunus persica Prupe.2G210200 PTHR12537:SF71 - PUMILIO HOMOLOG 4 Pp02 + View
Pisum sativum Psat6g182040 Nucleic acid binding protein NABP chr6LG2 + View
Papaver somniferum PSO339G0942 NC_039366.1 - View
Populus trichocarpa Potri.010G225600 PTHR12537//PTHR12537:SF71 - RNA BINDING PROTEIN PUMILIO-RELATED // PUMILIO HOMOLOG 4 Chr10 - View
Populus trichocarpa Potri.008G036500 PTHR12537//PTHR12537:SF71 - RNA BINDING PROTEIN PUMILIO-RELATED // PUMILIO HOMOLOG 4 Chr08 + View
Phaseolus vulgaris Phvul.007G097100 PTHR12537:SF71 - PUMILIO HOMOLOG 4 Chr07 - View
Quercus lobata QL08p054951 8 + View
Rosa chinensis RcHm_v2.0_Chr1g0362841 RcHm_v2.0_Chr1 + View
Rhododendron simsii Rhsim03G0117500 chr03 + View
Striga asiatica SGA_v2.0_scaffold51G18704 scaffold51 - View
Striga asiatica SGA_v2.0_scaffold2G01364 scaffold2 + View
Salvia bowleyana SalBow6G0968 GWHASIU00000002 + View
Salix brachista Sabra08G0024600 GWHAAZH00000008 + View
Simmondsia chinensis Sc20g0001680 GWHAASQ00000020 + View
Sechium edule Sed0022380 LG06 + View
Solanum lycopersicum Solyc11g008490.3 Pumilio-like protein 2 (AHRD V3.3 *** A0A2G2Y5N2_CAPAN) SL4.0ch11 + View
Schrenkiella parvula Sp3g08630 PTHR12537:SF71 - PUMILIO HOMOLOG 4 ch3-1 - View
Solanum pennellii Sopen11g004270 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3 UTR of target mRNA transcripts. | pumilio 1 (PUM1) | FUNCTIONS IN: RNA binding, binding | LOCATED IN: cellular_component unknown | EXPRESSED IN: cultured cell | CONTAINS InterPro DOMAIN/s: Nucleic acid binding NABP , Pumilio RNA-binding repeat , Armadillo-like helical , Armadillo-type fold | BEST Arabidopsis thaliana protein match is: pumilio 3 Spenn-ch11 + View
Trochodendron aralioides TAR633G1278 group2 + View
Theobroma cacao Thecc.10G079600 Pumilio 4 Chromosome_10 - View
Tarenaya hassleriana THA.LOC104816421 pumilio homolog 4 NW_010965775.1 - View
Trifolium pratense TPR.G1916 Tp57577_TGAC_v2_LG1 - View
Tripterygium wilfordii TWI38G0492 NC_052252.1 + View
Vaccinium macrocarpon vmacro07127 Similar to APUM4: Pumilio homolog 4 (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0720G0985 CM024071.1 + View
Vitis vinifera GSVIVG01016236001 chr13 - View
Zea mays Zm00001eb259050 Zm00001e016242 Pumilio homolog 4 5 + View