Gene: AT3G10360

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G10360
  • Transcript Identifier AT3G10360.1
  • Gene Type Coding gene
  • Location Chr3 : 3211276-3215144 : negative

Gene Family Information

  • ID HOM05D000810
  • #Genes/#Species 729/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G10360.1
  • symbol PUM4
  • Alias APUM4,pumilio 4
  • uniprot Q9SS47

Descriptions

  • Description pumilio 4
  • Computational description pumilio 4 (PUM4); FUNCTIONS IN: RNA binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313), Nucleic acid binding NABP (InterPro:IPR012940), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 1 (TAIR:AT2G29200.1); Has 3756 Blast hits to 2007 proteins in 241 species: Archae - 0; Bacteria - 4; Metazoa - 783; Fungi - 1274; Plants - 892; Viruses - 0; Other Eukaryotes - 803 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010608
IBA
Gene Ontologyposttranscriptional regulation of gene expression1
GO:0006417
IEA
GOA Databaseregulation of translation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IDA, HDA
IBA
Gene OntologymRNA binding1 2 3
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM, IBA
Gene Ontologycytoplasm1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR033712 Pumilio, RNA binding domain
IPR016024 Armadillo-type fold
IPR011989 Armadillo-like helical
IPR001313 Pumilio RNA-binding repeat
IPR012940 Nucleic acid binding NABP
Mapman id Description
35.1 not assigned.annotated