Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Ca_24853_v3 Ca_LG8_v3 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G5460 LG-4 + View
Acer truncatum Atru.chr13.456 chr13 - View
Acer truncatum Atru.chr3.586 chr3 + View
Actinidia chinensis Actinidia15334 Lachesis_group26 - View
Actinidia chinensis Actinidia19190 Lachesis_group8 - View
Actinidia chinensis Actinidia22537 Lachesis_group28 - View
Arabidopsis lyrata AL2G35150 scaffold_2 + View
Aquilegia oxysepala Aqoxy5G01611 CHR05 - View
Aquilegia oxysepala Aqoxy6G01128 CHR06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.5SV8SS K01247 - DNA-3-methyladenine glycosylase II (alkA) arahy.Tifrunner.gnm1.Arahy.17 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.D4MEDX K01247 - DNA-3-methyladenine glycosylase II (alkA) arahy.Tifrunner.gnm1.Arahy.08 + View
Arabidopsis thaliana AT1G19480 DNA glycosylase superfamily protein DNA glycosylase superfamily protein%3B FUNCTIONS IN: catalytic activity%3B INVOLVED IN: DNA repair%2C base-excision repair%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257)%2C HhH-GPD domain (InterPro:IPR003265)%3B BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT1G75230.1)%3B Has 4603 Blast hits to 4603 proteins in 1096 species: Archae - 62%3B Bacteria - 2357%3B Metazoa - 1%3B Fungi - 142%3B Plants - 80%3B Viruses - 0%3B Other Eukaryotes - 1961 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT1G75230 DNA glycosylase superfamily protein DNA glycosylase superfamily protein%3B FUNCTIONS IN: catalytic activity%3B INVOLVED IN: DNA repair%2C base-excision repair%3B LOCATED IN: nucleus%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257)%2C HhH-GPD domain (InterPro:IPR003265)%3B BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT1G19480.1)%3B Has 4607 Blast hits to 4603 proteins in 1094 species: Archae - 60%3B Bacteria - 2345%3B Metazoa - 15%3B Fungi - 147%3B Plants - 87%3B Viruses - 0%3B Other Eukaryotes - 1953 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaB02g07018 ChrB02 + View
Brassica napus C06p32710 C06 - View
Brassica napus A07p28940 A07 - View
Brassica napus A06p15650 A06 + View
Brassica napus C05p17880 C05 + View
Brassica oleracea BolC5t30495H C5 + View
Brassica oleracea BolC6t38395H C6 - View
Brassica rapa BraA07t30536Z A07 - View
Brassica rapa BraA06t24674Z A06 + View
Camellia sinensis var. sinensis CSS0039677 PREDICTED: probable DNA-3-methyladenine glycosylase 2 [Vitis vinifera] Chr4 - View
Capsicum annuum CAN.G1226.26 PGAv.1.6.scaffold1226 + View
Cannabis sativa CANSAT25G0636 NC_044370.1 + View
Corylus avellana Haze_15079 Protein of unknown function 11 - View
Corylus avellana Haze_17955 Protein of unknown function 7 - View
Citrus clementina Ciclev10026218m.g scaffold_7 - View
Citrus clementina Ciclev10001539m.g scaffold_5 + View
Carpinus fangiana Cfa018163 Cfa07 + View
Cardamine hirsuta CARHR068560 DNA-3-methyladenine glycosylase II Chr2 + View
Citrullus lanatus ClCG01G019620 DNA-3-methyladenine glycosylase, putative CG_Chr01 + View
Citrullus lanatus ClCG05G018920 DNA-3-methyladenine glycosylase, putative CG_Chr05 - View
Cucumis melo MELO3C003829.2 DNA-3-methyladenine glycosylase 1 chr04 - View
Corchorus olitorius COL.COLO4_26300 hypothetical protein AWUE01019230.1 - View
Carica papaya Cpa.g.sc6.120 supercontig_6 + View
Capsella rubella Carub.0001s1904 K01247 - DNA-3-methyladenine glycosylase II (alkA) scaffold_1 + View
Capsella rubella Carub.0002s2205 K01247 - DNA-3-methyladenine glycosylase II (alkA) scaffold_2 + View
Cucumis sativus L. CsaV3_6G046270 DNA-3-methyladenine glycosylase, putative chr6 - View
Cucumis sativus L. CsaV3_3G045200 DNA-3-methyladenine glycosylase-like chr3 + View
Davidia involucrata Dinv36091 GWHABJS00000002 + View
Davidia involucrata Dinv39429 GWHABJS00000011 + View
Durio zibethinus Duzib116G0594 NW_019167949.1 - View
Durio zibethinus Duzib041G0049 NW_019167826.1 - View
Durio zibethinus Duzib093G0083 NW_019167937.1 + View
Durio zibethinus Duzib264G0244 NW_019167960.1 + View
Eucalyptus grandis Eucgr.F01572 Chr06 + View
Eutrema salsugineum Thhalv10007939m.g K01247 - DNA-3-methyladenine glycosylase II (alkA) scaffold_5 - View
Eutrema salsugineum Thhalv10018654m.g K01247 - DNA-3-methyladenine glycosylase II (alkA) scaffold_9 - View
Fragaria x ananassa FAN15G0352 K01247 - DNA-3-methyladenine glycosylase II (alkA) Fvb2-4 - View
Fragaria x ananassa FAN26G0807 K01247 - DNA-3-methyladenine glycosylase II (alkA) Fvb1-2 - View
Fragaria x ananassa FAN27G0912 K01247 - DNA-3-methyladenine glycosylase II (alkA) Fvb2-1 - View
Fragaria vesca FvH4_2g39710 K01247 - DNA-3-methyladenine glycosylase II (alkA) Fvb2 - View
Gossypium hirsutum Gohir.D05G261200 K01247 - DNA-3-methyladenine glycosylase II (alkA) D05 - View
Gossypium hirsutum Gohir.A05G259200 K01247 - DNA-3-methyladenine glycosylase II (alkA) A05 - View
Gossypium hirsutum Gohir.D05G196600 K01247 - DNA-3-methyladenine glycosylase II (alkA) D05 - View
Gossypium hirsutum Gohir.A05G193400 K01247 - DNA-3-methyladenine glycosylase II (alkA) A05 - View
Glycine max Glyma.06G031700 K01247 - DNA-3-methyladenine glycosylase II (alkA) Gm06 - View
Glycine max Glyma.04G031600 K01247 - DNA-3-methyladenine glycosylase II (alkA) Gm04 - View
Gossypium raimondii Gorai.009G201500 Chr09 - View
Gossypium raimondii Gorai.009G273100 Chr09 - View
Hydrangea macrophylla Hma1.2p1_0203F.1_g086300 Hma1.2p1_0203F.1 - View
Lupinus albus Lalb_Chr08g0245881 K01247 - DNA-3-methyladenine glycosylase II (alkA) Lalb_Chr08 + View
Lotus japonicus Lj1g0005875 K01247 - DNA-3-methyladenine glycosylase II (alkA) chr1 - View
Lonicera japonica Lj2P453T31 GWHAAZE00000002 + View
Malus domestica MD08G1030800 DNA glycosylase superfamily protein Chr08 - View
Malus domestica MD15G1026100 DNA glycosylase superfamily protein Chr15 - View
Manihot esculenta Manes.05G158700 Chromosome05 - View
Manihot esculenta Manes.18G023800 Chromosome18 - View
Medicago truncatula Medtr3g111890 HhH-GPD base excision DNA repair family protein chr3 + View
Nelumbo nucifera Nn5g29632 chr5 + View
Nicotiana tabacum Nitab4.5_0002224g0060 DNA glycosylase, Helix-turn-helix, base-excision DNA repair, C-terminal, HhH-GPD domain Nitab4.5_0002224 + View
Punica granatum PGR083G0893 NC_045133.1 - View
Prunus persica Prupe.1G378400 Pp01 - View
Pisum sativum Psat5g016960 HhH-GPD superfamily base excision DNA repair protein chr5LG3 - View
Papaver somniferum PSO675G3180 NC_039358.1 + View
Papaver somniferum PSO541G1078 NC_039363.1 + View
Populus trichocarpa Potri.005G227700 K01247 - DNA-3-methyladenine glycosylase II (alkA) Chr05 + View
Phaseolus vulgaris Phvul.009G058200 K01247 - DNA-3-methyladenine glycosylase II (alkA) Chr09 + View
Quercus lobata QL02p008877 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr6g0301151 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim06G0032500 chr06 - View
Salix brachista Sabra02G0028300 GWHAAZH00000002 - View
Simmondsia chinensis Sc15g0006980 GWHAASQ00000015 + View
Sechium edule Sed0025948 LG13 - View
Sapria himalayana SHI08150 scaffold7_18583372 - View
Solanum lycopersicum Solyc04g080470.4 DNA-3-methyladenine glycosylase 1-like (AHRD V3.3 *** A0A2I4EQE9_9ROSI) SL4.0ch04 + View
Schrenkiella parvula Sp5g30390 K01247 - DNA-3-methyladenine glycosylase II (alkA) ch5-7 + View
Schrenkiella parvula Sp1g17350 K01247 - DNA-3-methyladenine glycosylase II (alkA) ch1-1 + View
Solanum pennellii Sopen04g034060 DNA glycosylase superfamily protein | FUNCTIONS IN: catalytic activity | INVOLVED IN: DNA repair, base-excision repair | LOCATED IN: nucleus | EXPRESSED IN: 18 plant structures | EXPRESSED DURING: 9 growth stages | CONTAINS InterPro DOMAIN/s: DNA glycosylase , HhH-GPD domain | BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein Spenn-ch04 + View
Theobroma cacao Thecc.01G034200 Chromosome_1 - View
Theobroma cacao Thecc.08G028000 DNA glycosylase superfamily protein Chromosome_8 + View
Trifolium pratense TPR.G12400 Tp57577_TGAC_v2_LG7 - View
Tripterygium wilfordii TWI56G1431 NC_052242.1 + View
Tripterygium wilfordii TWI36G1215 NC_052237.1 + View
Vigna mungo VMungo1309G0078 CM024072.1 + View
Vitis vinifera GSVIVG01009720001 chr18 + View
Vitis vinifera GSVIVG01018948001 chr4 + View