Gene: Solyc04g080470.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g080470.4
  • Transcript Identifier Solyc04g080470.4.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 62619128-62621442 : positive

Gene Family Information

  • ID HOM05D003046
  • #Genes/#Species 226/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g080470.4.1
  • uniprot A0A3Q7GBD2
  • gene_id Solyc04g080470

Descriptions

  • Description DNA-3-methyladenine glycosylase 1-like (AHRD V3.3 *** A0A2I4EQE9_9ROSI)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair
GO:0006284
IEA
GOA Databasebase-excision repair
GO:0006284
IEA
InterProbase-excision repair
GO:0006285
IBA
GOA Databasebase-excision repair, AP site formation
GO:0006307
IBA
GOA DatabaseDNA dealkylation involved in DNA repair

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0043916
IBA
GOA DatabaseDNA-7-methylguanine glycosylase activity
GO:0008725
IBA
GOA DatabaseDNA-3-methyladenine glycosylase activity
GO:0032131
IBA
GOA Databasealkylated DNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032993
IBA
GOA Databaseprotein-DNA complex
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011257 DNA glycosylase
IPR003265 HhH-GPD domain
Mapman id Description
35.1 not assigned.annotated