Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG9G12390 LG-9 + View
Acer truncatum Atru.chr13.158 chr13 - View
Actinidia chinensis Actinidia17034 Lachesis_group28 - View
Actinidia chinensis Actinidia15485 Lachesis_group26 - View
Arabidopsis lyrata AL8G19340 scaffold_8 - View
Avicennia marina MSTRG.25296 ScioBoG_4119_HRSCAF_4138 + View
Aquilegia oxysepala Aqoxy6G01762 CHR06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.3UR6JB PTHR23076//PTHR23076:SF33 - METALLOPROTEASE M41 FTSH // ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED arahy.Tifrunner.gnm1.Arahy.06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.H4TEYY PTHR23076//PTHR23076:SF33 - METALLOPROTEASE M41 FTSH // ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED arahy.Tifrunner.gnm1.Arahy.16 - View
Arabidopsis thaliana AT5G42270 FtsH extracellular protease family VAR1 contains a conserved motif for ATPase and a metalloprotease characteristic to FtsH proteins%2C and is targeted into chloroplasts. A VAR1-fusion protein synthesized in vitro exhibited ATPase activity and partial metalloprotease activity. This protein is located to the thylakoid membrane and forms a complex with VAR2. FtsH1 (VAR1) and FtsH5 are interchangeable in thylakoid membranes. Phosphorylation of this protein is dependent on calcium. VARIEGATED 1 (VAR1)%3B FUNCTIONS IN: metallopeptidase activity%2C ATP-dependent peptidase activity%2C ATPase activity%3B INVOLVED IN: photoinhibition%2C PSII associated light-harvesting complex II catabolic process%2C protein catabolic process%3B LOCATED IN: thylakoid%2C chloroplast thylakoid membrane%2C chloroplast%2C chloroplast envelope%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Peptidase M41%2C FtsH (InterPro:IPR005936)%2C ATPase%2C AAA-type%2C core (InterPro:IPR003959)%2C ATPase%2C AAA+ type%2C core (InterPro:IPR003593)%2C ATPase%2C AAA-type%2C conserved site (InterPro:IPR003960)%2C Peptidase M41 (InterPro:IPR000642)%3B BEST Arabidopsis thaliana protein match is: FTSH protease 1 (TAIR:AT1G50250.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 + View
Beta vulgaris EL10Ac1g01987 PTHR23076:SF33 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED Chr1_EL10_PGA_scaffold3 - View
Camellia sinensis var. sinensis CSS0013964 hypothetical protein JCGZ_08123 [Jatropha curcas] Chr9 + View
Camellia sinensis var. sinensis CSS0047800 PREDICTED: ATP-dependent zinc metalloprotease FTSH, chloroplastic [Nelumbo nucifera] Chr4 - View
Capsicum annuum CAN.G311.108 PGAv.1.6.scaffold311 + View
Cannabis sativa CANSAT25G3075 NC_044370.1 - View
Corylus avellana Haze_22752 Similar to FTSH: ATP-dependent zinc metalloprotease FTSH, chloroplastic (Nicotiana tabacum OX%3D4097) 3 + View
Coffea canephora Cc10_g00780 ATP-dependent zinc metalloprotease FTSH, chloroplastic chr10 - View
Citrus clementina Ciclev10000422m.g scaffold_5 + View
Carpinus fangiana Cfa014054 Cfa05 + View
Carya illinoinensis CiPaw.08G072200 PTHR23076:SF33 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED Chr08 + View
Carya illinoinensis CiPaw.07G140000 PTHR23076//PTHR23076:SF33 - METALLOPROTEASE M41 FTSH // ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED Chr07 - View
Citrullus lanatus ClCG05G015160 ATP-dependent zinc metalloprotease FtsH CG_Chr05 - View
Cucumis melo MELO3C017011.2 ATP-dependent zinc metalloprotease FTSH, chloroplastic chr07 - View
Carica papaya Cpa.g.sc26.216 supercontig_26 - View
Chenopodium quinoa AUR62036891 FTSH: ATP-dependent zinc metalloprotease FTSH, chloroplastic C_Quinoa_Scaffold_3356 - View
Capsella rubella Carub.0008s0692 PTHR23076//PTHR23076:SF33 - METALLOPROTEASE M41 FTSH // ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED scaffold_8 - View
Cucumis sativus L. CsaV3_4G037130 ATP-dependent zinc metalloprotease FTSH chr4 + View
Daucus carota DCAR_013907 hypothetical protein DCARv2_Chr4 - View
Davidia involucrata Dinv31928 GWHABJS00000002 + View
Durio zibethinus Duzib093G0369 NW_019167937.1 + View
Durio zibethinus Duzib116G0870 NW_019167949.1 - View
Erigeron canadensis ECA238G0039 Conyza_canadensis_scaffold:6 + View
Erigeron canadensis ECA233G2108 Conyza_canadensis_scaffold:1 - View
Erythranthe guttata Migut.N03199 scaffold_14 + View
Fragaria x ananassa FAN15G3612 PTHR23076//PTHR23076:SF33 - METALLOPROTEASE M41 FTSH // ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED Fvb2-4 + View
Fragaria x ananassa FAN27G1176 PTHR23076//PTHR23076:SF33 - METALLOPROTEASE M41 FTSH // ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED Fvb2-1 - View
Fragaria vesca FvH4_2g37610 PTHR23076//PTHR23076:SF33 - METALLOPROTEASE M41 FTSH // ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED Fvb2 - View
Gossypium hirsutum Gohir.A01G107100 PTHR23076//PTHR23076:SF33 - METALLOPROTEASE M41 FTSH // ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED A01 - View
Gossypium hirsutum Gohir.D05G183400 PTHR23076//PTHR23076:SF33 - METALLOPROTEASE M41 FTSH // ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED D05 - View
Gossypium hirsutum Gohir.A05G180400 PTHR23076//PTHR23076:SF33 - METALLOPROTEASE M41 FTSH // ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED A05 - View
Gossypium hirsutum Gohir.D01G093500 PTHR23076//PTHR23076:SF33 - METALLOPROTEASE M41 FTSH // ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED D01 - View
Glycine max Glyma.04G019100 PTHR23076//PTHR23076:SF33 - METALLOPROTEASE M41 FTSH // ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED Gm04 - View
Glycine max Glyma.06G019400 PTHR23076//PTHR23076:SF33 - METALLOPROTEASE M41 FTSH // ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED Gm06 - View
Gossypium raimondii Gorai.009G188700 Chr09 - View
Gossypium raimondii Gorai.002G118800 Chr02 - View
Hydrangea macrophylla Hma1.2p1_0507F.1_g168360 Hma1.2p1_0507F.1 + View
Lupinus albus Lalb_Chr08g0246361 PTHR23076:SF33 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED Lalb_Chr08 + View
Lupinus albus Lalb_Chr03g0033621 PTHR23076//PTHR23076:SF33 - METALLOPROTEASE M41 FTSH // ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED Lalb_Chr03 + View
Lotus japonicus Lj1g0006399 PTHR23076:SF33 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED chr1 - View
Lonicera japonica Lj4A804T71 GWHAAZE00000004 + View
Lonicera japonica Lj4A12T82 GWHAAZE00000004 - View
Lactuca sativa Lsat_1_v5_gn_2_6021 PTHR23076:SF33 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED Lsat_1_v8_lg_2 + View
Malus domestica MD08G1003700 FtsH extracellular protease family Chr08 - View
Malus domestica MD15G1003200 FtsH extracellular protease family Chr15 - View
Manihot esculenta Manes.18G006400 Chromosome18 - View
Manihot esculenta Manes.05G135500 Chromosome05 - View
Medicago truncatula Medtr3g115110 ATP-dependent zinc metalloprotease FTSH protein chr3 + View
Nelumbo nucifera Nn5g30914 chr5 + View
Nicotiana tabacum Nitab4.5_0000588g0220 Peptidase, FtsH, Peptidase M41, ATPase, AAA-type, conserved site, AAA+ ATPase domain, P-loop containing nucleoside triphosphate hydrolase, ATPase, AAA-type, core Nitab4.5_0000588 - View
Punica granatum PGR031G3779 NC_045127.1 + View
Prunus persica Prupe.1G355600 K03798 - cell division protease FtsH [EC:3.4.24.-] (ftsH, hflB) Pp01 - View
Pisum sativum Psat5g011960 Peptidase family M41 chr5LG3 - View
Papaver somniferum PSO675G0020 NC_039358.1 + View
Papaver somniferum PSO541G0070 NC_039363.1 + View
Papaver somniferum PSO210G3385 NC_039359.1 + View
Populus trichocarpa Potri.005G249200 PTHR23076//PTHR23076:SF33 - METALLOPROTEASE M41 FTSH // ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED Chr05 + View
Populus trichocarpa Potri.002G012000 PTHR23076//PTHR23076:SF33 - METALLOPROTEASE M41 FTSH // ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED Chr02 - View
Phaseolus vulgaris Phvul.009G021400 PTHR23076:SF33 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED Chr09 + View
Quercus lobata QL02p013883 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr6g0304121 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim06G0008500 chr06 - View
Salix brachista Sabra02G0009500 GWHAAZH00000002 - View
Salix brachista Sabra05G0192700 GWHAAZH00000005 + View
Simmondsia chinensis Sc26g0004620 GWHAASQ00000026 + View
Sechium edule Sed0015820 LG01 - View
Solanum lycopersicum Solyc04g082250.3 FtsH-like protein precursor SL4.0ch04 + View
Schrenkiella parvula Sp7g08320 PTHR23076:SF33 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED ch7-3 - View
Solanum pennellii Sopen04g035870 Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9) - Nicotiana tabacum (Common tobacco), VAR1 contains a conserved motif for ATPase and a metalloprotease characteristic to FtsH proteins, and is targeted into chloroplasts. A VAR1-fusion protein synthesized in vitro exhibited ATPase activity and partial metalloprotease activity. This protein is located to the thylakoid membrane and forms a complex with VAR2. FtsH1 (VAR1) and FtsH5 are interchangeable in thylakoid membranes. | VARIEGATED 1 (VAR1) | FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity | INVOLVED IN: photoinhibition, PSII associated light-harvesting complex II catabolic process, protein catabolic process | LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH , ATPase, AAA-type, core , ATPase, AAA+ type, core , ATPase, AAA-type, conserved site , Peptidase M41 | BEST Arabidopsis thaliana protein match is: FTSH protease 1 Spenn-ch04 + View
Trochodendron aralioides TAR628G1216 group5 + View
Trochodendron aralioides TAR376G0932 group14 + View
Theobroma cacao Thecc.08G057100 FTSH protease 1 Chromosome_8 + View
Trifolium pratense TPR.G38244 Tp57577_TGAC_v2_LG7 + View
Tripterygium wilfordii TWI12G0176 NC_052243.1 - View
Vaccinium macrocarpon vmacro21827 Similar to FTSH: ATP-dependent zinc metalloprotease FTSH, chloroplastic (Nicotiana tabacum OX%3D4097) chr10_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1309G2279 CM024072.1 + View
Vitis vinifera GSVIVG01008686001 chr18 - View