Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G5400 LG-8 - View
Acer truncatum Atru.chr9.754 chr9 + View
Amaranthus hybridus Ah.11g047120 AmaHy_arrow1_Scaffold_11 + View
Aquilegia oxysepala Aqoxy3G03903 CHR03 + View
Arabidopsis thaliana AT3G18524 MUTS homolog 2 Encodes a DNA mismatch repair homolog of human MutS gene%2C MSH6. MSH2 is involved in maintaining genome stability and repressing recombination of mismatched heteroduplexes.There are four MutS genes in Arabidopsis%2C MSH2%2C MSH3%2C MSH6%2C and MSH7%2C which all act as heterodimers and bind to 51-mer duplexes. MSH2 has different binding specificity to different mismatches in combination with MSH3%2C MSH6%2C or MSH7. MUTS homolog 2 (MSH2)%3B FUNCTIONS IN: damaged DNA binding%2C protein binding%2C mismatched DNA binding%2C ATP binding%3B INVOLVED IN: mismatch repair%2C negative regulation of reciprocal meiotic recombination%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS%2C clamp (InterPro:IPR007861)%2C DNA mismatch repair protein MutS%2C connector (InterPro:IPR007860)%2C DNA mismatch repair protein MutS%2C core (InterPro:IPR007696)%2C DNA mismatch repair protein MutS%2C C-terminal (InterPro:IPR000432)%2C DNA mismatch repair protein MutS-like%2C N-terminal (InterPro:IPR007695)%2C DNA mismatch repair protein%2C MSH2 (InterPro:IPR011184)%3B BEST Arabidopsis thaliana protein match is: homolog of DNA mismatch repair protein MSH3 (TAIR:AT4G25540.1)%3B Has 13560 Blast hits to 13453 proteins in 2654 species: Archae - 128%3B Bacteria - 8942%3B Metazoa - 734%3B Fungi - 813%3B Plants - 457%3B Viruses - 3%3B Other Eukaryotes - 2483 (source: NCBI BLink). Chr3 - View
Beta vulgaris EL10Ac5g11250 K08735 - DNA mismatch repair protein MSH2 (MSH2) Chr5_EL10_PGA_scaffold2 + View
Corylus avellana Haze_18615 Similar to MSH2: DNA mismatch repair protein MSH2 (Arabidopsis thaliana OX%3D3702) 7 + View
Coffea canephora Cc04_g07520 DNA mismatch repair protein Msh2 chr4 - View
Citrus clementina Ciclev10018746m.g scaffold_3 + View
Carya illinoinensis CiPaw.15G126900 K08735 - DNA mismatch repair protein MSH2 (MSH2) Chr15 + View
Citrullus lanatus ClCG06G015030 DNA mismatch repair protein MutS CG_Chr06 - View
Davidia involucrata Dinv36905 GWHABJS00000006 - View
Erythranthe guttata Migut.I00396 scaffold_9 + View
Fragaria x ananassa FAN18G1805 K08735 - DNA mismatch repair protein MSH2 (MSH2) Fvb5-1 - View
Fragaria x ananassa FAN18G1105 K08735 - DNA mismatch repair protein MSH2 (MSH2) Fvb5-1 - View
Fragaria x ananassa FAN04G0918 PF01624//PF05188 - MutS domain I (MutS_I) // MutS domain II (MutS_II) Fvb5-4 - View
Fragaria x ananassa FAN08G1716 K08735 - DNA mismatch repair protein MSH2 (MSH2) Fvb5-3 + View
Fragaria vesca FvH4_5g12700 K08735 - DNA mismatch repair protein MSH2 (MSH2) Fvb5 - View
Hydrangea macrophylla Hma1.2p1_0340F.1_g129890 Hma1.2p1_0340F.1 - View
Lonicera japonica Lj5C145G2 GWHAAZE00000005 + View
Malus domestica MD14G1221900 MUTS homolog 2 Chr14 + View
Malus domestica MD06G1211200 MUTS homolog 2 Chr06 + View
Nelumbo nucifera Nn4g23718 chr4 + View
Punica granatum PGR083G2045 NC_045133.1 + View
Papaver somniferum PSO782G4375 NC_039365.1 + View
Populus trichocarpa Potri.012G060000 K08735 - DNA mismatch repair protein MSH2 (MSH2) Chr12 + View
Rosa chinensis RcHm_v2.0_Chr7g0184631 RcHm_v2.0_Chr7 + View
Trochodendron aralioides TAR622G0276 group8 - View
Theobroma cacao Thecc.03G028100 MUTS Chromosome_3 + View
Vitis vinifera GSVIVG01008235001 chr17 - View