Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G14100 LG-8 + View
Acer truncatum Atru.chr5.3376 chr5 + View
Arabidopsis lyrata AL3G49670 scaffold_3 + View
Amaranthus hybridus Ah.01g008250 Transcription factor ABORTED MICROSPORES (Basic helix-loop-helix protein 21) (AtbHLH21) (bHLH 21) (Transcription factor EN 48) (bHLH transcription factor bHLH021) AmaHy_arrow1_Scaffold_1 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.GJBP3C PTHR31945//PTHR31945:SF11 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR ABORTED MICROSPORES arahy.Tifrunner.gnm1.Arahy.19 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.W4LCKL PTHR31945//PTHR31945:SF11 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR ABORTED MICROSPORES arahy.Tifrunner.gnm1.Arahy.09 + View
Arabidopsis thaliana AT2G16910 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a basic helix-loop helix transcription factor involved in tapetal cell development. Loss of function mutations are male sterile. AMS binds to a region termed the E box of target gene promoters. ABORTED MICROSPORES (AMS)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: tapetal layer development%2C regulation of transcription%2C pollen development%3B LOCATED IN: nucleus%3B EXPRESSED IN: petal%2C leaf whorl%2C sepal%2C flower%2C seed%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G26744.4)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaB03g16426 ChrB03 + View
Brassica carinata BcaB08g34676 ChrB08 + View
Brassica carinata BcaC06g36193 ChrC06 + View
Brassica carinata BcaC01g02972 ChrC01 - View
Brassica napus C03p57610 C03 + View
Brassica napus C07p06690 C07 - View
Brassica napus A07p04210 A07 - View
Brassica napus A03p46130 A03 + View
Brassica oleracea BolC7t41091H C7 - View
Brassica oleracea BolC3t18036H C3 + View
Brassica rapa BraA03t13741Z A03 + View
Beta vulgaris EL10Ac9g21368 PTHR31945//PTHR31945:SF11 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR ABORTED MICROSPORES Chr9_EL10_PGA_scaffold8 - View
Corylus avellana Haze_02127 Similar to AMS: Transcription factor ABORTED MICROSPORES (Arabidopsis thaliana OX%3D3702) 1 - View
Citrus clementina Ciclev10030105m.g scaffold_8 - View
Carpinus fangiana Cfa005256 Cfa02 + View
Cardamine hirsuta CARHR107170 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr3 + View
Carya illinoinensis CiPaw.05G083200 PTHR31945:SF11 - TRANSCRIPTION FACTOR ABORTED MICROSPORES Chr05 + View
Carya illinoinensis CiPaw.06G121200 PTHR31945:SF11 - TRANSCRIPTION FACTOR ABORTED MICROSPORES Chr06 - View
Citrullus lanatus ClCG02G004010 BHLH transcription factor CG_Chr02 - View
Carica papaya Cpa.g.sc20.94 supercontig_20 + View
Chenopodium quinoa AUR62013021 Protein of unknown function C_Quinoa_Scaffold_1040 - View
Chenopodium quinoa AUR62010033 Protein of unknown function C_Quinoa_Scaffold_1257 - View
Capsella rubella Carub.0003s3072 PTHR31945//PTHR31945:SF11 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR ABORTED MICROSPORES scaffold_3 + View
Cucumis sativus L. CsaV3_7G001100 Unknown protein chr7 + View
Davidia involucrata Dinv41932 GWHABJS00000002 + View
Davidia involucrata Dinv14116 GWHABJS00000005 - View
Durio zibethinus Duzib132G1094 NW_019167915.1 - View
Erigeron canadensis ECA234G0339 Conyza_canadensis_scaffold:4 + View
Eucalyptus grandis Eucgr.G01783 Chr07 + View
Eutrema salsugineum Thhalv10022620m.g PTHR31945:SF11 - TRANSCRIPTION FACTOR ABORTED MICROSPORES scaffold_11 - View
Fragaria x ananassa FAN24G0324 PTHR31945:SF11 - TRANSCRIPTION FACTOR ABORTED MICROSPORES Fvb2-2 - View
Fragaria x ananassa FAN20G1511 PTHR31945//PTHR31945:SF11 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR ABORTED MICROSPORES Fvb2-3 - View
Fragaria x ananassa FAN15G2735 PTHR31945//PTHR31945:SF11 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR ABORTED MICROSPORES Fvb2-4 + View
Fragaria x ananassa FAN27G2066 PTHR31945:SF11 - TRANSCRIPTION FACTOR ABORTED MICROSPORES Fvb2-1 + View
Fragaria vesca FvH4_2g15460 PTHR31945//PTHR31945:SF11 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR ABORTED MICROSPORES Fvb2 + View
Gossypium hirsutum Gohir.D12G035600 PTHR31945//PTHR31945:SF11 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR ABORTED MICROSPORES D12 + View
Gossypium hirsutum Gohir.A12G036800 PTHR31945//PTHR31945:SF11 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR ABORTED MICROSPORES A12 - View
Glycine max Glyma.20G107466 PTHR31945//PTHR31945:SF11 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR ABORTED MICROSPORES Gm20 - View
Glycine max Glyma.10G281800 PTHR31945//PTHR31945:SF11 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR ABORTED MICROSPORES Gm10 + View
Gossypium raimondii Gorai.008G036900 Chr08 + View
Hydrangea macrophylla Hma1.2p1_0032F.1_g019320 Hma1.2p1_0032F.1 - View
Lupinus albus Lalb_Chr02g0143431 PTHR31945//PTHR31945:SF11 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR ABORTED MICROSPORES Lalb_Chr02 + View
Lotus japonicus Lj5g0000172 PTHR31945:SF11 - TRANSCRIPTION FACTOR ABORTED MICROSPORES chr5 - View
Lonicera japonica Lj9A394T44 GWHAAZE00000009 + View
Lactuca sativa Lsat_1_v5_gn_4_71800 PTHR31945:SF11 - TRANSCRIPTION FACTOR ABORTED MICROSPORES Lsat_1_v8_lg_4 - View
Malus domestica MD10G1125700 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr10 + View
Malus domestica MD05G1122900 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr05 + View
Manihot esculenta Manes.04G072000 Chromosome04 - View
Punica granatum PGR042G3640 NC_045130.1 - View
Prunus persica Prupe.8G166800 Pp08 + View
Papaver somniferum PSO170G4243 NC_039360.1 + View
Populus trichocarpa Potri.009G136300 PTHR31945//PTHR31945:SF11 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR ABORTED MICROSPORES Chr09 - View
Phaseolus vulgaris Phvul.007G019000 PTHR31945:SF11 - TRANSCRIPTION FACTOR ABORTED MICROSPORES Chr07 - View
Quercus lobata QL11p050977 11 + View
Rosa chinensis RcHm_v2.0_Chr6g0278441 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim05G0054200 chr05 - View
Simmondsia chinensis Sc14g0002300 GWHAASQ00000014 + View
Sechium edule Sed0019722 LG04 - View
Sapria himalayana SHI05752 scaffold8_16897533 + View
Schrenkiella parvula Sp3g30190 PTHR31945:SF11 - TRANSCRIPTION FACTOR ABORTED MICROSPORES ch3-5 + View
Trochodendron aralioides TAR381G1205 group11 - View
Trochodendron aralioides TAR628G0026 group5 + View
Theobroma cacao Thecc.02G058200 Basic helix-loop-helix DNA-binding superfamily protein Chromosome_2 - View
Tarenaya hassleriana THA.LOC104819656 transcription factor ABORTED MICROSPORES-like isoform X1 NW_010966177.1 + View
Tarenaya hassleriana THA.LOC104804324 transcription factor ABORTED MICROSPORES-like isoform X1 NW_010971389.1 - View
Trifolium pratense TPR.G2429 Tp57577_TGAC_v2_LG1 + View
Tripterygium wilfordii TWI75G1106 NC_052253.1 - View
Tripterygium wilfordii TWI31G0590 NC_052233.1 - View
Vigna mungo VMungo0720G1541 CM024071.1 + View
Vanilla planifolia HPP92_012948 basic helix-loop-helix (bHLH) DNA-binding superfamily protein *** CM028155.1 + View
Vitis vinifera GSVIVG01024008001 chr3 + View