Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G2400 LG-5 - View
Acer truncatum Atru.chr5.1398 chr5 + View
Actinidia chinensis Actinidia21105 Lachesis_group9 - View
Arabidopsis lyrata AL6G50090 scaffold_6 - View
Arabidopsis lyrata AL1G12710 scaffold_1 - View
Avicennia marina MSTRG.17439 ScioBoG_19834_HRSCAF_19925 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.J7W4G4 K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) arahy.Tifrunner.gnm1.Arahy.16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.2BA4KG K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) arahy.Tifrunner.gnm1.Arahy.06 + View
Arabidopsis thaliana AT4G02840 Small nuclear ribonucleoprotein family protein Small nuclear ribonucleoprotein family protein%3B FUNCTIONS IN: molecular_function unknown%3B LOCATED IN: nucleolus%2C nucleus%2C small nucleolar ribonucleoprotein complex%2C plasma membrane%2C membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163)%2C Like-Sm ribonucleoprotein (LSM) domain%2C eukaryotic/archaea-type (InterPro:IPR006649)%2C Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920)%3B BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT3G07590.2)%3B Has 1198 Blast hits to 1197 proteins in 227 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 457%3B Fungi - 332%3B Plants - 215%3B Viruses - 0%3B Other Eukaryotes - 194 (source: NCBI BLink). Chr4 + View
Brassica carinata BcaC01g06725 ChrC01 - View
Brassica napus A03p30810 A03 - View
Brassica oleracea BolC3t16040H C3 - View
Brassica rapa BraA03t12259Z A03 - View
Beta vulgaris EL10Ac7g17224 K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) Chr7_EL10_PGA_scaffold5 - View
Capsicum annuum CAN.G1682.19 PGAv.1.6.scaffold1682 + View
Cicer arietinum L. Ca_08574_v3 Ca_LG3_v3 + View
Cicer arietinum L. Ca_09763_v3 Ca_LG4_v3 - View
Coffea canephora Cc01_g19630 Small nuclear ribonucleoprotein family protein chr1 - View
Citrus clementina Ciclev10022934m.g scaffold_3 - View
Cardamine hirsuta CARHR251210 Small nuclear ribonucleoprotein family protein Chr8 + View
Carya illinoinensis CiPaw.07G092900 K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) Chr07 - View
Carya illinoinensis CiPaw.08G104400 K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) Chr08 + View
Corchorus olitorius COL.COLO4_09117 hypothetical protein AWUE01014120.1 - View
Carica papaya Cpa.g.sc52.16 supercontig_52 + View
Capsella rubella Carub.0006s3421 K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) scaffold_6 - View
Davidia involucrata Dinv11245 GWHABJS00000007 + View
Davidia involucrata Dinv32947 GWHABJS00000010 - View
Durio zibethinus Duzib138G0852 NW_019167893.1 + View
Durio zibethinus Duzib133G0526 NW_019167938.1 + View
Erigeron canadensis ECA247G0841 Conyza_canadensis_scaffold:7 - View
Eucalyptus grandis Eucgr.K03379 Chr11 - View
Erythranthe guttata Migut.D00283 scaffold_4 + View
Eutrema salsugineum Thhalv10029079m.g K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) scaffold_3 + View
Fragaria x ananassa FAN20G0184 K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) Fvb2-3 + View
Fragaria x ananassa FAN24G0719 K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) Fvb2-2 + View
Fragaria x ananassa FAN27G2136 K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) Fvb2-1 - View
Fragaria x ananassa FAN15G3011 K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) Fvb2-4 - View
Fragaria vesca FvH4_2g23760 K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) Fvb2 - View
Gossypium hirsutum Gohir.A08G185700 K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) A08 + View
Gossypium hirsutum Gohir.D12G005100 K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) D12 - View
Gossypium hirsutum Gohir.D08G076900 K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) D08 - View
Gossypium hirsutum Gohir.A08G068500 K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) A08 - View
Gossypium hirsutum Gohir.A12G005600 K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) A12 - View
Gossypium hirsutum Gohir.A11G121800 K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) A11 + View
Gossypium hirsutum Gohir.D11G127000 K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) D11 + View
Gossypium hirsutum Gohir.D08G203800 K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) D08 + View
Glycine max Glyma.19G154600 K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) Gm19 + View
Glycine max Glyma.03G152100 K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) Gm03 + View
Gossypium raimondii Gorai.007G135700 Chr07 + View
Gossypium raimondii Gorai.004G215800 Chr04 + View
Gossypium raimondii Gorai.008G005000 Chr08 - View
Gossypium raimondii Gorai.004G081600 Chr04 - View
Helianthus annuus HanXRQChr10g0282791 Putative LSM domain; Like-Sm (LSM) domain containing protein, LSm4/SmD1/SmD3 HanXRQChr10 - View
Hydrangea macrophylla Hma1.2p1_0628F.1_g192030 Hma1.2p1_0628F.1 + View
Lupinus albus Lalb_Chr06g0163051 K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) Lalb_Chr06 - View
Lotus japonicus Lj1g0025963 K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) chr1 - View
Lotus japonicus Lj5g0027009 K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) chr5 - View
Lonicera japonica Lj1C45G8 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_9_4121 Lsat_1_v8_lg_9 + View
Malus domestica MD11G1287700 Small nuclear ribonucleoprotein family protein Chr11 - View
Malus domestica MD03G1267200 Small nuclear ribonucleoprotein family protein Chr03 - View
Manihot esculenta Manes.05G075000 Chromosome05 + View
Manihot esculenta Manes.01G208900 Chromosome01 - View
Medicago truncatula Medtr1g072370 small nuclear ribonucleoprotein chr1 - View
Medicago truncatula Medtr7g094680 small nuclear ribonucleoprotein chr7 + View
Nicotiana tabacum Nitab4.5_0000759g0100 U6 snRNA-associated Sm-like protein LSm4/Small nuclear ribonucleoprotein Sm D1/D3, Ribonucleoprotein LSM domain, eukaryotic/archaea-type, Like-Sm (LSM) domain, Ribonucleoprotein LSM domain Nitab4.5_0000759 + View
Nicotiana tabacum Nitab4.5_0001028g0110 Like-Sm (LSM) domain, Ribonucleoprotein LSM domain, Ribonucleoprotein LSM domain, eukaryotic/archaea-type, U6 snRNA-associated Sm-like protein LSm4/Small nuclear ribonucleoprotein Sm D1/D3 Nitab4.5_0001028 - View
Petunia axillaris Peaxi162Scf00570g00713 Small nuclear ribonucleoprotein family protein Peaxi162Scf00570 + View
Petunia axillaris Peaxi162Scf00783g00331 Small nuclear ribonucleoprotein family protein Peaxi162Scf00783 - View
Punica granatum PGR044G1843 NC_045134.1 - View
Prunus persica Prupe.8G242900 Pp08 - View
Pisum sativum Psat6g060600 LSM domain chr6LG2 - View
Pisum sativum Psat3g065000 LSM domain chr3LG5 - View
Populus trichocarpa Potri.002G054800 K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) Chr02 - View
Populus trichocarpa Potri.005G207900 K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) Chr05 + View
Phaseolus vulgaris Phvul.001G149700 K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) Chr01 + View
Quercus lobata QL12p022157 12 - View
Rosa chinensis RcHm_v2.0_Chr6g0291251 RcHm_v2.0_Chr6 - View
Striga asiatica SGA_v2.0_scaffold1G00460 scaffold1 + View
Striga asiatica SGA_v2.0_scaffold81G25987 scaffold81 + View
Salvia bowleyana SalBow6G4986 GWHASIU00000002 + View
Salix brachista Sabra02G0044400 GWHAAZH00000002 - View
Salix brachista Sabra05G0158300 GWHAAZH00000005 + View
Sechium edule Sed0026841 LG05 + View
Solanum lycopersicum Solyc06g084310.4 Small nuclear ribonucleoprotein Sm D1 (AHRD V3.3 *** A0A2U1M5R8_ARTAN) SL4.0ch06 - View
Schrenkiella parvula Sp6g02870 K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) ch6-1 + View
Solanum pennellii Sopen06g035700 Small nuclear ribonucleoprotein family protein | FUNCTIONS IN: molecular_function unknown | LOCATED IN: nucleus, small nucleolar ribonucleoprotein complex | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain , Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type , Like-Sm ribonucleoprotein (LSM)-related domain | BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein . Spenn-ch06 - View
Selenicereus undatus Hund17994 Scaffold_33675 + View
Selenicereus undatus Hund05351 Scaffold_19641 + View
Theobroma cacao Thecc.01G281700 Chromosome_1 - View
Tarenaya hassleriana THA.LOC104801227 small nuclear ribonucleoprotein Sm D1-like NW_010969548.1 - View
Trifolium pratense TPR.G6177 Tp57577_TGAC_v2_LG4 + View
Trifolium pratense TPR.G1587 Tp57577_TGAC_v2_scaf_74 + View
Tripterygium wilfordii TWI14G0594 NC_052249.1 + View
Tripterygium wilfordii TWI59G0904 NC_052248.1 + View
Tripterygium wilfordii TWI23G1159 NC_052239.1 + View
Vaccinium macrocarpon vmacro14929 Similar to SMD1B: Small nuclear ribonucleoprotein SmD1b (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro02561 Similar to SMD1B: Small nuclear ribonucleoprotein SmD1b (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1383G3581 CM024070.1 + View
Vitis vinifera GSVIVG01011117001 chr7 - View