Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0024364 hypothetical protein VITISV_021999 [Vitis vinifera] Chr3 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr13.818 chr13 + View
Acer truncatum Atru.chr5.2366 chr5 - View
Actinidia chinensis Actinidia38100 Lachesis_group7 + View
Actinidia chinensis Actinidia00378 Lachesis_group12 + View
Actinidia chinensis Actinidia34363 Lachesis_group2 + View
Actinidia chinensis Actinidia10191 Lachesis_group26 + View
Actinidia chinensis Actinidia22688 Lachesis_group28 + View
Actinidia chinensis Actinidia08250 Lachesis_group27 + View
Arabidopsis lyrata AL8G17470 scaffold_8 - View
Aquilegia oxysepala Aqoxy5G00885 CHR05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.QN2T57 PTHR16223:SF19 - TRANSCRIPTION FACTOR BHLH83-RELATED arahy.Tifrunner.gnm1.Arahy.11 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.NPAY75 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED arahy.Tifrunner.gnm1.Arahy.06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.N69S22 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED arahy.Tifrunner.gnm1.Arahy.19 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.HL643V PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED arahy.Tifrunner.gnm1.Arahy.08 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.QR1FDI PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED arahy.Tifrunner.gnm1.Arahy.17 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.UV35CQ PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED arahy.Tifrunner.gnm1.Arahy.09 - View
Arabidopsis thaliana AT5G43175 basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: nucleus%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: root hair defective 6-like 4 (TAIR:AT1G27740.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaC01g01573 ChrC01 - View
Brassica napus A08p26080 A08 - View
Brassica napus C03p74550 C03 + View
Brassica oleracea BolC7t42256H C7 - View
Brassica rapa BraA08t34558Z A08 - View
Beta vulgaris EL10Ac1g02392 PTHR16223:SF9 - TRANSCRIPTION FACTOR BHLH139-RELATED Chr1_EL10_PGA_scaffold3 - View
Capsicum annuum CAN.G724.11 PGAv.1.6.scaffold724 + View
Capsicum annuum CAN.G606.53 PGAv.1.6.scaffold606 + View
Cicer arietinum L. Ca_13229_v3 Ca_LG4_v3 - View
Cicer arietinum L. Ca_15907_v3 Ca_LG5_v3 - View
Corylus avellana Haze_22322 Similar to BHLH85: Transcription factor bHLH85 (Arabidopsis thaliana OX%3D3702) 3 + View
Coffea canephora Cc10_g05680 Putative uncharacterized protein chr10 + View
Coffea canephora Cc02_g19780 Putative Transcription factor bHLH85 chr2 + View
Citrus clementina Ciclev10003450m.g scaffold_5 + View
Citrus clementina Ciclev10030309m.g scaffold_8 - View
Cardamine hirsuta CARHR180730 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr6 - View
Carya illinoinensis CiPaw.08G049700 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Chr08 + View
Carya illinoinensis CiPaw.05G017000 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Chr05 + View
Carya illinoinensis CiPaw.07G176000 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Chr07 - View
Carya illinoinensis CiPaw.06G166000 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Chr06 - View
Citrullus lanatus ClCG02G006780 basic helix-loop-helix (bHLH) DNA-binding superfamily protein LENGTH=223 CG_Chr02 + View
Citrullus lanatus ClCG08G016420 Transcription factor, putative CG_Chr08 + View
Citrullus lanatus ClCG05G020540 Transcription factor, putative CG_Chr05 + View
Citrullus lanatus ClCG10G010480 Transcription factor, putative CG_Chr10 - View
Cucumis melo MELO3C018516.2 transcription factor bHLH54 chr01 + View
Cucumis melo MELO3C016810.2 Transcription factor, putative chr07 - View
Cucumis melo MELO3C010811.2 Transcription factor, putative chr03 + View
Carica papaya Cpa.g.sc142.14 supercontig_142 + View
Cucumis sativus L. CsaV3_2G026190 Transcription factor chr2 - View
Cucumis sativus L. CsaV3_7G007860 transcription factor bHLH54 chr7 - View
Cucumis sativus L. CsaV3_4G034980 Transcription factor, putative chr4 + View
Daucus carota DCAR_009888 hypothetical protein DCARv2_Chr3 - View
Daucus carota DCAR_020074 hypothetical protein DCARv2_Chr6 + View
Daucus carota DCAR_021955 hypothetical protein DCARv2_Chr6 + View
Daucus carota DCAR_012813 hypothetical protein DCARv2_Chr4 - View
Davidia involucrata Dinv39231 GWHABJS00000011 - View
Davidia involucrata Dinv44965 GWHABJS00000002 - View
Davidia involucrata Dinv42233 GWHABJS00000002 - View
Durio zibethinus Duzib116G0426 NW_019167949.1 + View
Durio zibethinus Duzib248G1195 NW_019168048.1 - View
Durio zibethinus Duzib132G1119 NW_019167915.1 + View
Durio zibethinus Duzib041G0684 NW_019167826.1 + View
Erigeron canadensis ECA232G4460 Conyza_canadensis_scaffold:2 - View
Erigeron canadensis ECA236G3361 Conyza_canadensis_scaffold:3 - View
Erigeron canadensis ECA234G0498 Conyza_canadensis_scaffold:4 - View
Eucalyptus grandis Eucgr.G01234 Chr07 - View
Eucalyptus grandis Eucgr.F02259 Chr06 + View
Erythranthe guttata Migut.N02774 scaffold_14 + View
Erythranthe guttata Migut.B00443 scaffold_2 + View
Erythranthe guttata Migut.N01142 scaffold_14 - View
Erythranthe guttata Migut.C00492 scaffold_3 + View
Eutrema salsugineum Thhalv10009862m.g PTHR16223:SF9 - TRANSCRIPTION FACTOR BHLH139-RELATED scaffold_5 - View
Fragaria x ananassa FAN15G2741 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Fvb2-4 - View
Fragaria x ananassa FAN27G1860 PTHR16223:SF9 - TRANSCRIPTION FACTOR BHLH139-RELATED Fvb2-1 - View
Fragaria x ananassa FAN24G3192 PTHR16223:SF9 - TRANSCRIPTION FACTOR BHLH139-RELATED Fvb2-2 + View
Fragaria x ananassa FAN20G1671 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Fvb2-3 + View
Fragaria vesca FvH4_2g33230 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Fvb2 - View
Gossypium hirsutum Gohir.D02G204600 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED D02 - View
Gossypium hirsutum Gohir.A03G183000 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED A03 - View
Gossypium hirsutum Gohir.A05G209601 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED A05 - View
Gossypium hirsutum Gohir.D05G212400 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED D05 + View
Gossypium hirsutum Gohir.D06G020850 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED D06 + View
Gossypium hirsutum Gohir.A06G023750 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED A06 + View
Glycine max Glyma.04G045300 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Gm04 + View
Glycine max Glyma.17G236100 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Gm17 + View
Glycine max Glyma.14G088400 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Gm14 - View
Glycine max Glyma.06G045800 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Gm06 + View
Gossypium raimondii Gorai.010G025400 Chr10 + View
Gossypium raimondii Gorai.009G219100 Chr09 + View
Gossypium raimondii Gorai.005G231900 Chr05 - View
Helianthus annuus HanXRQChr09g0266671 Putative myc-type, basic helix-loop-helix (bHLH) domain HanXRQChr09 + View
Hydrangea macrophylla Hma1.2p1_0819F.1_g223780 Hma1.2p1_0819F.1 - View
Lupinus albus Lalb_Chr23g0267471 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Lalb_Chr23 + View
Lupinus albus Lalb_Chr21g0308091 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Lalb_Chr21 - View
Lupinus albus Lalb_Chr14g0368261 PTHR16223:SF9 - TRANSCRIPTION FACTOR BHLH139-RELATED Lalb_Chr14 - View
Lupinus albus Lalb_Chr02g0145011 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Lalb_Chr02 - View
Lupinus albus Lalb_Chr06g0165161 PTHR16223:SF9 - TRANSCRIPTION FACTOR BHLH139-RELATED Lalb_Chr06 - View
Lotus japonicus Lj5g0028138 PTHR16223:SF9 - TRANSCRIPTION FACTOR BHLH139-RELATED chr5 - View
Lotus japonicus Lj5g0002934 PTHR16223:SF9 - TRANSCRIPTION FACTOR BHLH139-RELATED chr5 + View
Lonicera japonica Lj5A218T90 GWHAAZE00000005 + View
Lonicera japonica Lj4A70G35 GWHAAZE00000004 + View
Lactuca sativa Lsat_1_v5_gn_1_24280 PTHR16223:SF9 - TRANSCRIPTION FACTOR BHLH139-RELATED Lsat_1_v8_lg_1 + View
Lactuca sativa Lsat_1_v5_gn_7_85221 PTHR16223:SF9 - TRANSCRIPTION FACTOR BHLH139-RELATED Lsat_1_v8_lg_7 - View
Malus domestica MD05G1098800 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr05 + View
Malus domestica MD08G1086200 ROOT HAIR DEFECTIVE 6-LIKE 2 Chr08 - View
Malus domestica MD15G1071200 ROOT HAIR DEFECTIVE 6-LIKE 2 Chr15 - View
Manihot esculenta Manes.18G045600 Chromosome18 + View
Manihot esculenta Manes.05G181100 Chromosome05 + View
Medicago truncatula Medtr3g103030 transcription factor chr3 + View
Medicago truncatula Medtr1g106460 basic helix loop helix (BHLH) DNA-binding family protein chr1 - View
Medicago truncatula Medtr1g018090 helix loop helix DNA-binding domain protein chr1 - View
Oryza sativa ssp. japonica Os07g0588400 Root Hair Defective-Six Like (RSL) Class II family of transcription factor, Regulation of root hair development chr07 - View
Oryza sativa ssp. japonica Os03g0205300 Similar to Helix-loop-helix DNA-binding domain containing protein. chr03 - View
Petunia axillaris Peaxi162Scf00160g00419 Unknown protein Peaxi162Scf00160 + View
Petunia axillaris Peaxi162Scf00152g00426 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Peaxi162Scf00152 + View
Petunia axillaris Peaxi162Scf00016g02842 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Peaxi162Scf00016 + View
Petunia axillaris Peaxi162Scf00081g01616 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Peaxi162Scf00081 + View
Petunia axillaris Peaxi162Scf00003g02730 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Peaxi162Scf00003 + View
Punica granatum PGR031G0368 NC_045127.1 + View
Punica granatum PGR042G2588 NC_045130.1 - View
Prunus persica Prupe.1G424000 Pp01 - View
Populus trichocarpa Potri.014G017100 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Chr14 - View
Populus trichocarpa Potri.009G089000 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Chr09 - View
Populus trichocarpa Potri.002G119200 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Chr02 - View
Populus trichocarpa Potri.001G294300 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Chr01 + View
Phaseolus vulgaris Phvul.001G026800 PTHR16223:SF9 - TRANSCRIPTION FACTOR BHLH139-RELATED Chr01 - View
Phaseolus vulgaris Phvul.007G044900 PTHR16223:SF9 - TRANSCRIPTION FACTOR BHLH139-RELATED Chr07 + View
Quercus lobata QL12p037870 12 + View
Rosa chinensis RcHm_v2.0_Chr6g0309431 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim07G0220900 chr07 - View
Striga asiatica SGA_v2.0_scaffold32G12999 scaffold32 - View
Salvia bowleyana SalBow7G2877 GWHASIU00000005 - View
Salvia bowleyana SalBow6G1303 GWHASIU00000002 + View
Salix brachista Sabra16G0184300 GWHAAZH00000016 - View
Salix brachista Sabra02G0093700 GWHAAZH00000002 - View
Salix brachista Sabra09G0068900 GWHAAZH00000009 - View
Salix brachista Sabra14G0010900 GWHAAZH00000014 - View
Simmondsia chinensis Sc26g0004170 GWHAASQ00000026 + View
Simmondsia chinensis Sc15g0005730 GWHAASQ00000015 - View
Simmondsia chinensis Sc02g0007840 GWHAASQ00000002 + View
Sechium edule Sed0016645 LG13 + View
Sechium edule Sed0003665 LG13 - View
Solanum lycopersicum Solyc04g077960.1 Transcription factor bHLH85 (AHRD V3.3 *** A0A1U8GC08_CAPAN) SL4.0ch04 - View
Solanum lycopersicum Solyc12g088380.1 Transcription factor bHLH84 (AHRD V3.3 *** A0A2G3B3S2_CAPCH) SL4.0ch12 + View
Schrenkiella parvula Sp1g23970 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED ch1-1 + View
Schrenkiella parvula Sp3g27940 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED ch3-5 - View
Schrenkiella parvula Sp2g07960 PTHR16223:SF9 - TRANSCRIPTION FACTOR BHLH139-RELATED ch2-4 + View
Solanum pennellii Sopen04g031550 basic helix-loop-helix (bHLH) DNA-binding superfamily protein | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription | LOCATED IN: nucleus | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: ROOT HAIR DEFECTIVE 6-LIKE 2 . Spenn-ch04 - View
Solanum pennellii Sopen01g049400 basic helix-loop-helix (bHLH) DNA-binding superfamily protein | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription | LOCATED IN: nucleus | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: ROOT HAIR DEFECTIVE 6-LIKE 2 . Spenn-ch01 - View
Solanum pennellii Sopen12g030360 RSL2 was expressed concurrently with RSL4 and its expression was controlled by RHD6 and RSL1. Required for root-hair growth. | ROOT HAIR DEFECTIVE 6-LIKE 2 (RSL2) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: root hair initiation, response to auxin stimulus, cell growth, regulation of transcription | LOCATED IN: nucleus | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein Spenn-ch12 + View
Solanum tuberosum PGSC0003DMG400011547 Helix-loop-helix DNA-binding domain containing protein ST4.03ch12 + View
Solanum tuberosum PGSC0003DMG400021526 Transcription factor ST4.03ch04 - View
Solanum tuberosum PGSC0003DMG400036714 Basic helix-loop-helix protein BHLH10 ST4.03ch01 - View
Selenicereus undatus Hund05308 Scaffold_19641 - View
Trochodendron aralioides TAR376G1226 group14 - View
Trochodendron aralioides TAR381G0838 group11 + View
Trochodendron aralioides TAR625G1505 group4 + View
Trochodendron aralioides TAR628G0902 group5 - View
Theobroma cacao Thecc.08G090100 Root hair defective 6-like 2 Chromosome_8 - View
Tarenaya hassleriana THA.LOC104825774 transcription factor bHLH139-like NW_010967605.1 + View
Trifolium pratense TPR.G3799 Tp57577_TGAC_v2_LG1 - View
Tripterygium wilfordii TWI12G0910 NC_052243.1 + View
Tripterygium wilfordii TWI56G0739 NC_052242.1 - View
Tripterygium wilfordii TWI59G0365 NC_052248.1 + View
Vigna mungo VMungo0647G1067 CM024073.1 - View
Vitis vinifera GSVIVG01037846001 chr3 + View
Vitis vinifera GSVIVG01009357001 chr18 - View
Zea mays Zm00001eb326150 Zm00001e035422 Transcription factor bHLH85 7 - View
Zea mays Zm00001eb400660 Zm00001e038765 Putative HLH DNA-binding domain superfamily protein 9 + View