Gene: PGSC0003DMG400011547

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400011547
  • Transcript Identifier PGSC0003DMT400030165
  • Gene Type Coding gene
  • Location ST4.03ch12 : 56255714-56257164 : positive

Gene Family Information

  • ID HOM05D001118
  • #Genes/#Species 550/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37448152
  • id PGSC0003DMG400011547.v4.03
  • uniprot M1ATU1

Descriptions

  • Description Helix-loop-helix DNA-binding domain containing protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006357
IBA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT2G14760
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT4G33880
GO:0048766
ISO
PLAZA Integrative Orthologyroot hair initiation AT4G33880
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT4G33880

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000981
IBA
GOA DatabaseDNA-binding transcription factor activity, RNA polymerase II-specific
GO:0000978
IBA
GOA DatabaseRNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G14760
GO:0046983
ISO
PLAZA Homology (enrichment)protein dimerization activity HOM05D001118

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
No InterPro domains detected for this gene.
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)