Gene: Solyc04g077960.1

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g077960.1
  • Transcript Identifier Solyc04g077960.1.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 60805595-60807035 : negative

Gene Family Information

  • ID HOM05D001118
  • #Genes/#Species 550/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g077960.1.1
  • uniprot K4BUN3
  • gene_id Solyc04g077960

Descriptions

  • Description Transcription factor bHLH85 (AHRD V3.3 *** A0A1U8GC08_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006357
IBA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT1G27740
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT2G14760
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT1G27740
GO:0048766
ISO
PLAZA Integrative Orthologyroot hair initiation AT1G27740
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT1G27740

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
IEA
GOA Databaseprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0000981
IBA
GOA DatabaseDNA-binding transcription factor activity, RNA polymerase II-specific
GO:0000978
IBA
GOA DatabaseRNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT1G27740
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G14760

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036638 Helix-loop-helix DNA-binding domain superfamily
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)