Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0015824 hypothetical protein JCGZ_06309 [Jatropha curcas] Chr2 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G110 LG-4 - View
Acer truncatum Atru.chr1.3345 chr1 + View
Actinidia chinensis Actinidia24741 Lachesis_group9 - View
Actinidia chinensis Actinidia32725 Lachesis_group27 + View
Actinidia chinensis Actinidia21685 Lachesis_group1 - View
Avicennia marina MSTRG.22661 ScioBoG_3703_HRSCAF_3719 - View
Aquilegia oxysepala Aqoxy7G01582 CHR07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.A5WQDM PF12325//PF12329//PF14159 - TATA element modulatory factor 1 TATA binding (TMF_TATA_bd) // TATA element modulatory factor 1 DNA binding (TMF_DNA_bd) // CAAD domains of cyanobacterial aminoacyl-tRNA synthetase (CAAD) arahy.Tifrunner.gnm1.Arahy.09 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.M6JGC2 KOG4673 - Transcription factor TMF, TATA element modulatory factor arahy.Tifrunner.gnm1.Arahy.18 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SA7FDN PF12325 - TATA element modulatory factor 1 TATA binding (TMF_TATA_bd) arahy.Tifrunner.gnm1.Arahy.07 - View
Arabidopsis thaliana AT1G79830 golgin Putative 5 This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC5 co-localizes with Golgi markers%2C and this localization appears to be replicated using the C-terminal (139 aa) portion of the protein. The C-terminal portion of the protein can also specifically interact with two members of the Rab family of GTPases (RabH1b and RabH1c). golgin candidate 5 (GC5)%3B FUNCTIONS IN: protein binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: Golgi apparatus%2C nucleus%2C cytoplasm%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: TATA element modulatory factor 1 DNA binding (InterPro:IPR022092)%2C TATA element modulatory factor 1 TATA binding (InterPro:IPR022091)%3B Has 167116 Blast hits to 92088 proteins in 3687 species: Archae - 2004%3B Bacteria - 38214%3B Metazoa - 68462%3B Fungi - 14168%3B Plants - 9575%3B Viruses - 617%3B Other Eukaryotes - 34076 (source: NCBI BLink). golgin candidate 5 (GC5)%3B FUNCTIONS IN: protein binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: Golgi apparatus%2C cytoplasm%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: TATA element modulatory factor 1 DNA binding (InterPro:IPR022092)%2C TATA element modulatory factor 1 TATA binding (InterPro:IPR022091). Chr1 - View
Amborella trichopoda ATR0315G089 AmTr_v1.0_scaffold00109 + View
Beta vulgaris EL10Ac9g22035 KOG4673 - Transcription factor TMF, TATA element modulatory factor Chr9_EL10_PGA_scaffold8 + View
Capsicum annuum CAN.G1152.8 PGAv.1.6.scaffold1152 + View
Cannabis sativa CANSAT56G3073 NC_044371.1 - View
Cicer arietinum L. Ca_01133_v3 Ca_LG1_v3 + View
Corylus avellana Haze_16353 Similar to GC5: Golgin candidate 5 (Arabidopsis thaliana OX%3D3702) 11 - View
Coffea canephora Cc04_g03000 Golgin candidate 5 chr4 - View
Citrus clementina Ciclev10024803m.g scaffold_7 - View
Ceratophyllum demersum CDE02G1875 1 - View
Carya illinoinensis CiPaw.02G148500 PTHR13140:SF265 - PROTEIN HCP-2-RELATED Chr02 - View
Carya illinoinensis CiPaw.01G235400 KOG4673 - Transcription factor TMF, TATA element modulatory factor Chr01 - View
Corchorus olitorius COL.COLO4_30440 Sugar/inositol transporter AWUE01020729.1 + View
Chenopodium quinoa AUR62011668 GC5: Golgin candidate 5 C_Quinoa_Scaffold_3333 + View
Chenopodium quinoa AUR62016491 GC5: Golgin candidate 5 C_Quinoa_Scaffold_3514 + View
Capsella rubella Carub.0002s2767 PF12325 - TATA element modulatory factor 1 TATA binding (TMF_TATA_bd) scaffold_2 + View
Daucus carota DCAR_016209 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv38016 GWHABJS00000006 + View
Davidia involucrata Dinv30477 GWHABJS00000019 + View
Durio zibethinus Duzib160G0549 NW_019168015.1 + View
Durio zibethinus Duzib235G1126 NW_019167982.1 + View
Erigeron canadensis ECA234G0658 Conyza_canadensis_scaffold:4 - View
Erigeron canadensis ECA247G0039 Conyza_canadensis_scaffold:7 + View
Erigeron canadensis ECA232G1585 Conyza_canadensis_scaffold:2 + View
Eucalyptus grandis Eucgr.F03041 Chr06 + View
Erythranthe guttata Migut.I00939 scaffold_9 - View
Erythranthe guttata Migut.D01015 scaffold_4 - View
Eutrema salsugineum Thhalv10018077m.g scaffold_9 + View
Fragaria x ananassa FAN14G2596 PTHR23503:SF19 - PLASTIDIC GLUCOSE TRANSPORTER 3-RELATED Fvb6-1 - View
Fragaria x ananassa FAN02G3342 PTHR23503:SF19 - PLASTIDIC GLUCOSE TRANSPORTER 3-RELATED Fvb6-4 - View
Fragaria x ananassa FAN05G3380 PTHR23503//PTHR23503:SF19 - FAMILY NOT NAMED // PLASTIDIC GLUCOSE TRANSPORTER 3-RELATED Fvb6-3 - View
Fragaria vesca FvH4_6g31822 KOG4673 - Transcription factor TMF, TATA element modulatory factor Fvb6 + View
Gossypium hirsutum Gohir.D05G131500 KOG4673 - Transcription factor TMF, TATA element modulatory factor D05 + View
Gossypium hirsutum Gohir.D10G069800 KOG4673 - Transcription factor TMF, TATA element modulatory factor D10 - View
Gossypium hirsutum Gohir.A05G132400 KOG4673 - Transcription factor TMF, TATA element modulatory factor A05 + View
Gossypium hirsutum Gohir.A10G081600 KOG4673 - Transcription factor TMF, TATA element modulatory factor A10 + View
Glycine max Glyma.15G016700 KOG4673 - Transcription factor TMF, TATA element modulatory factor Gm15 + View
Glycine max Glyma.13G356900 KOG4673 - Transcription factor TMF, TATA element modulatory factor Gm13 - View
Gossypium raimondii Gorai.009G135200 Chr09 + View
Gossypium raimondii Gorai.011G074100 Chr11 - View
Helianthus annuus HanXRQChr16g0500831 Putative TATA element modulatory factor 1 TATA binding HanXRQChr16 - View
Helianthus annuus HanXRQChr12g0360801 Putative TATA element modulatory factor 1 TATA binding; TATA element modulatory factor 1 DNA binding HanXRQChr12 + View
Helianthus annuus HanXRQChr10g0313461 Putative TATA element modulatory factor 1 TATA binding; TATA element modulatory factor 1 DNA binding HanXRQChr10 + View
Hydrangea macrophylla Hma1.2p1_1195F.1_g265855 Hma1.2p1_1195F.1 + View
Lupinus albus Lalb_Chr14g0373191 KOG4673 - Transcription factor TMF, TATA element modulatory factor Lalb_Chr14 - View
Lupinus albus Lalb_Chr04g0262811 KOG4673 - Transcription factor TMF, TATA element modulatory factor Lalb_Chr04 + View
Lupinus albus Lalb_Chr24g0395951 KOG4673 - Transcription factor TMF, TATA element modulatory factor Lalb_Chr24 + View
Lotus japonicus Lj3g0009081 PF01535//PF12325//PF12329//PF13041//PF14432 - PPR repeat (PPR) // TATA element modulatory factor 1 TATA binding (TMF_TATA_bd) // TATA element modulatory factor 1 DNA binding (TMF_DNA_bd) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) chr3 - View
Lonicera japonica Lj5C57T13 GWHAAZE00000005 - View
Lonicera japonica Lj9C509G5 GWHAAZE00000009 + View
Lactuca sativa Lsat_1_v5_gn_5_130960 KOG4673 - Transcription factor TMF, TATA element modulatory factor Lsat_1_v8_lg_5 + View
Lactuca sativa Lsat_1_v5_gn_4_102580 Lsat_1_v8_lg_4 + View
Lactuca sativa Lsat_1_v5_gn_1_35300 Lsat_1_v8_lg_1 + View
Malus domestica MD09G1208900 golgin candidate 5 Chr09 + View
Malus domestica MD17G1190500 golgin candidate 5 Chr17 + View
Manihot esculenta Manes.11G037600 Chromosome11 - View
Medicago truncatula Medtr2g101700 coiled-coil vesicle tethering protein, putative chr2 - View
Nelumbo nucifera Nn3g18099 chr3 + View
Nicotiana tabacum Nitab4.5_0000351g0100 TATA element modulatory factor 1 TATA binding, TATA element modulatory factor 1 DNA binding Nitab4.5_0000351 - View
Olea europaea Oeu024073.1 chr2 - View
Petunia axillaris Peaxi162Scf00207g01030 golgin candidate 5 Peaxi162Scf00207 + View
Punica granatum PGR102G1144 NC_045129.1 + View
Prunus persica Prupe.3G066400 Pp03 - View
Pisum sativum Psat5g297520 TATA element modulatory factor 1 TATA binding chr5LG3 + View
Populus trichocarpa Potri.003G052100 KOG4673 - Transcription factor TMF, TATA element modulatory factor Chr03 - View
Populus trichocarpa Potri.001G185050 KOG4673 - Transcription factor TMF, TATA element modulatory factor Chr01 + View
Phaseolus vulgaris Phvul.005G169100 KOG4673 - Transcription factor TMF, TATA element modulatory factor Chr05 + View
Quercus lobata QL05p021582 5 - View
Rosa chinensis RcHm_v2.0_Chr2g0139071 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim08G0223900 chr08 + View
Striga asiatica SGA_v2.0_scaffold4G02009 scaffold4 + View
Striga asiatica SGA_v2.0_scaffold68G22978 scaffold68 - View
Salvia bowleyana SalBow7G4780 GWHASIU00000005 + View
Salix brachista Sabra01G0155200 GWHAAZH00000001 - View
Salix brachista Sabra03G0027000 GWHAAZH00000003 + View
Sapria himalayana SHI10997 scaffold13_12996478 + View
Solanum lycopersicum Solyc06g066610.4 Golgin candidate 5 (AHRD V3.3 *** A0A2G2WLI4_CAPBA) SL4.0ch06 - View
Schrenkiella parvula Sp5g35930 PF12329 - TATA element modulatory factor 1 DNA binding (TMF_DNA_bd) ch5-7 + View
Solanum pennellii Sopen06g024880 This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC5 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (139 aa) portion of the protein. The C-terminal portion of the protein can also specifically interact with two members of the Rab family of GTPases (RabH1b and RabH1c). | golgin candidate 5 (GC5) | FUNCTIONS IN: protein binding | INVOLVED IN: biological_process unknown | LOCATED IN: Golgi apparatus, cytoplasm | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: TATA element modulatory factor 1 DNA binding , TATA element modulatory factor 1 TATA binding . Spenn-ch06 - View
Selenicereus undatus Hund06634 Scaffold_33676 + View
Selenicereus undatus Hund00648 Scaffold_33678 - View
Trochodendron aralioides TAR383G0706 group10 + View
Trochodendron aralioides TAR626G0208 group3 - View
Theobroma cacao Thecc.06G092900 Golgin candidate 5 Chromosome_6 + View
Tripterygium wilfordii TWI12G1038 NC_052243.1 + View
Tripterygium wilfordii TWI18G0852 NC_052241.1 - View
Vaccinium macrocarpon vmacro18884 Similar to GC5: Golgin candidate 5 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1080G0951 CM024079.1 + View