Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0037868 PREDICTED: uncharacterized protein LOC100246114 [Vitis vinifera] Chr9 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G6980 LG-4 + View
Actinidia chinensis Actinidia10666 Lachesis_group28 + View
Actinidia chinensis Actinidia15147 Lachesis_group26 + View
Arabidopsis lyrata AL2G37080 scaffold_2 + View
Avicennia marina MSTRG.25311 ScioBoG_4119_HRSCAF_4138 - View
Avicennia marina MSTRG.24213 ScioBoG_4088_HRSCAF_4107 + View
Amaranthus hybridus Ah.05g167730 AmaHy_arrow1_Scaffold_5 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.0KPM2I PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED arahy.Tifrunner.gnm1.Arahy.15 + View
Arabidopsis thaliana AT1G76950 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein PRAF1%3B FUNCTIONS IN: chromatin binding%2C zinc ion binding%2C Ran GTPase binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation%2C RCC1 (InterPro:IPR000408)%2C Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591)%2C Zinc finger%2C FYVE-type (InterPro:IPR000306)%2C Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091)%2C Zinc finger%2C FYVE-related (InterPro:IPR017455)%2C Pleckstrin homology-type (InterPro:IPR011993)%2C Zinc finger%2C FYVE/PHD-type (InterPro:IPR011011)%3B BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G42140.1)%3B Has 21693 Blast hits to 8422 proteins in 452 species: Archae - 63%3B Bacteria - 2065%3B Metazoa - 9089%3B Fungi - 1093%3B Plants - 3056%3B Viruses - 5%3B Other Eukaryotes - 6322 (source: NCBI BLink). Chr1 + View
Amborella trichopoda ATR0772G069 AmTr_v1.0_scaffold00030 + View
Brassica carinata BcaC08g45498 ChrC08 - View
Brassica napus C06p51090 C06 + View
Brassica napus A07p42530 A07 + View
Brassica napus A07p28230 A07 - View
Brassica napus C06p31690 C06 - View
Brassica oleracea BolC6t40133H C6 + View
Brassica rapa BraA07t30464Z A07 - View
Brassica rapa BraA07t31777Z A07 + View
Beta vulgaris EL10Ac1g01509 PTHR22870//PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION // REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Chr1_EL10_PGA_scaffold3 - View
Cicer arietinum L. Ca_19927_v3 Ca_LG6_v3 + View
Corylus avellana Haze_17733 Similar to PRAF1: PH, RCC1 and FYVE domains-containing protein 1 (Arabidopsis thaliana OX%3D3702) 7 + View
Coffea canephora Cc10_g14090 Putative Probable E3 ubiquitin-protein ligase HERC1 chr10 + View
Citrus clementina Ciclev10000092m.g scaffold_5 - View
Ceratophyllum demersum CDE08G1678 6 - View
Ceratophyllum demersum CDE06G0887 4 + View
Carpinus fangiana Cfa018341 Cfa07 - View
Cardamine hirsuta CARHR070450 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain Chr2 + View
Carya illinoinensis CiPaw.16G014900 PTHR22870//PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION // REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Chr16 - View
Carya illinoinensis CiPaw.15G019100 PTHR22870//PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION // REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Chr15 - View
Citrullus lanatus ClCG08G006620 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain LENGTH=1103 CG_Chr08 + View
Cucumis melo MELO3C008391.2 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein chr03 - View
Carica papaya Cpa.g.sc49.39 supercontig_49 + View
Chenopodium quinoa AUR62013542 HERC1: Probable E3 ubiquitin-protein ligase HERC1 C_Quinoa_Scaffold_1611 - View
Chenopodium quinoa AUR62026740 HERC1: Probable E3 ubiquitin-protein ligase HERC1 C_Quinoa_Scaffold_2081 + View
Capsella rubella Carub.0002s2381 PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED scaffold_2 + View
Cucumis sativus L. CsaV3_6G029670 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain chr6 + View
Daucus carota DCAR_014423 hypothetical protein DCARv2_Chr4 + View
Davidia involucrata Dinv25840 GWHABJS00000011 - View
Davidia involucrata Dinv27055 GWHABJS00000014 - View
Davidia involucrata Dinv41102 GWHABJS00000002 - View
Durio zibethinus Duzib116G0852 NW_019167949.1 - View
Durio zibethinus Duzib041G0094 NW_019167826.1 - View
Durio zibethinus Duzib093G1935 NW_019167937.1 + View
Erigeron canadensis ECA246G1040 Conyza_canadensis_scaffold:8 + View
Eucalyptus grandis Eucgr.F02719 Chr06 + View
Erythranthe guttata Migut.N03217 scaffold_14 - View
Eutrema salsugineum Thhalv10018039m.g scaffold_9 - View
Fragaria x ananassa FAN24G1363 PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Fvb2-2 + View
Fragaria x ananassa FAN20G0720 PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Fvb2-3 + View
Gossypium hirsutum Gohir.A02G065500 PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED A02 + View
Gossypium hirsutum Gohir.D05G243700 PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED D05 - View
Gossypium hirsutum Gohir.D02G071300 PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED D02 + View
Gossypium hirsutum Gohir.A05G242300 PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED A05 - View
Glycine max Glyma.20G165400 PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Gm20 + View
Glycine max Glyma.10G226900 PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Gm10 - View
Gossypium raimondii Gorai.005G080500 Chr05 + View
Gossypium raimondii Gorai.009G253000 Chr09 - View
Helianthus annuus HanXRQChr05g0161691 Probable regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain HanXRQChr05 + View
Lupinus albus Lalb_Chr03g0035171 PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Lalb_Chr03 + View
Lotus japonicus Lj5g0008955 PTHR22870//PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION // REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED chr5 + View
Lonicera japonica Lj4C694G10 GWHAAZE00000004 - View
Lonicera japonica Lj7C368T11 GWHAAZE00000007 - View
Lactuca sativa Lsat_1_v5_gn_6_98720 Lsat_1_v8_lg_6 - View
Lactuca sativa Lsat_1_v5_gn_1_8600 PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Lsat_1_v8_lg_1 + View
Malus domestica MD10G1021300 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain Chr10 + View
Malus domestica MD07G1038100 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain Chr07 - View
Malus domestica MD05G1020200 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain Chr05 + View
Manihot esculenta Manes.18G089900 Chromosome18 - View
Manihot esculenta Manes.02G177100 Chromosome02 - View
Medicago truncatula Medtr1g099220 chromosome condensation regulator RCC1 repeat protein chr1 - View
Nelumbo nucifera Nn5g28683 chr5 - View
Olea europaea Oeu046023.1 chr14 + View
Oryza sativa ssp. japonica Os04g0686200 Similar to Chromosome condensation regulator protein (Fragment). chr04 - View
Petunia axillaris Peaxi162Scf00263g01019 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain Peaxi162Scf00263 - View
Punica granatum PGR042G2487 NC_045130.1 + View
Prunus persica Prupe.8G024300 PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Pp08 + View
Populus trichocarpa Potri.002G070300 PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Chr02 + View
Populus trichocarpa Potri.005G190000 PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Chr05 - View
Phaseolus vulgaris Phvul.007G078300 PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Chr07 + View
Quercus lobata QL02p024570 CM012294 - View
Salix brachista Sabra02G0054900 GWHAAZH00000002 + View
Salix brachista Sabra05G0145100 GWHAAZH00000005 - View
Simmondsia chinensis Sc02g0004290 GWHAASQ00000002 + View
Sechium edule Sed0027237 LG03 + View
Sechium edule Sed0009439 LG11 + View
Solanum lycopersicum Solyc04g071040.4 Regulator of chromosome condensation (RCC1) family protein (AHRD V3.3 *** A0A1P8B4Z7_ARATH) SL4.0ch04 - View
Schrenkiella parvula Sp5g32070 PTHR22870//PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION // REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED ch5-7 + View
Solanum pennellii Sopen04g026980 PRAF1 | FUNCTIONS IN: chromatin binding, zinc ion binding, Ran GTPase binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation, RCC1 , Disease resistance/zinc finger/chromosome condensation-like region , Zinc finger, FYVE-type , Regulator of chromosome condensation/beta-lactamase-inhibitor protein II , Zinc finger, FYVE-related , Pleckstrin homology-type , Zinc finger, FYVE/PHD-type | BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain Spenn-ch04 - View
Solanum tuberosum PGSC0003DMG400000792 Ran GTPase binding protein ST4.03ch04 - View
Selenicereus undatus Hund17418 Scaffold_33675 - View
Selenicereus undatus Hund26713 Scaffold_2055 + View
Trochodendron aralioides TAR625G1001 group4 - View
Theobroma cacao Thecc.08G147600 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain Chromosome_8 - View
Tarenaya hassleriana THA.LOC104806852 uncharacterized protein LOC104806852 isoform X1 NW_010962392.1 - View
Vigna mungo VMungo0720G0229 CM024071.1 - View
Vitis vinifera GSVIVG01001675001 chr18 - View