Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0022930 unnamed protein product [Coffea canephora] Chr11 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr12.429 chr12 - View
Acer truncatum Atru.chr3.3927 chr3 + View
Actinidia chinensis Actinidia34410 Lachesis_group15 - View
Actinidia chinensis Actinidia07738 Lachesis_group3 + View
Actinidia chinensis Actinidia02949 Lachesis_group22 - View
Avicennia marina MSTRG.283 ScioBoG_102831_HRSCAF_103044 - View
Amaranthus hybridus Ah.16g102380 Factor of DNA methylation 1 (Protein IDN2 PARALOG 1) (Protein IDN2-LIKE 1) AmaHy_arrow1_Scaffold_16 + View
Amaranthus hybridus Ah.10g037200 Protein INVOLVED IN DE NOVO 2 (Protein RNA-DIRECTED DNA METHYLATION 12) AmaHy_arrow1_Scaffold_10 - View
Aquilegia oxysepala Aqoxy1G00930 CHR01 - View
Aquilegia oxysepala Aqoxy2G02158 CHR02 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.HS1Y4C PTHR21596//PTHR21596:SF3 - RIBONUCLEASE P SUBUNIT P38 // F16A14.2-RELATED arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.CV26RK PTHR21596//PTHR21596:SF23 - RIBONUCLEASE P SUBUNIT P38 // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.S7J6Q0 PTHR21596//PTHR21596:SF23 - RIBONUCLEASE P SUBUNIT P38 // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.08 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WME1RR PTHR21596//PTHR21596:SF3 - RIBONUCLEASE P SUBUNIT P38 // F16A14.2-RELATED arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.0692WS PTHR21596//PTHR21596:SF23 - RIBONUCLEASE P SUBUNIT P38 // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.18 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JGRE33 PTHR21596//PTHR21596:SF23 - RIBONUCLEASE P SUBUNIT P38 // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.13 + View
Amborella trichopoda ATR0559G223 AmTr_v1.0_scaffold00012 - View
Brassica napus C09p51800 C09 + View
Brassica napus A10p16590 A10 + View
Brassica oleracea BolC9t58041H C9 + View
Beta vulgaris EL10Ac2g04734 PTHR21596//PTHR21596:SF16 - RIBONUCLEASE P SUBUNIT P38 // SUBFAMILY NOT NAMED Chr2_EL10_PGA_scaffold6 - View
Beta vulgaris EL10Ac7g16028 PTHR21596//PTHR21596:SF23 - RIBONUCLEASE P SUBUNIT P38 // SUBFAMILY NOT NAMED Chr7_EL10_PGA_scaffold5 + View
Capsicum annuum CAN.G1013.30 PGAv.1.6.scaffold1013 + View
Capsicum annuum CAN.G394.60 PGAv.1.6.scaffold394 + View
Cicer arietinum L. Ca_05889_v3 Ca_LG2_v3 - View
Cicer arietinum L. Ca_01322_v3 Ca_LG1_v3 - View
Cicer arietinum L. Ca_08168_v3 Ca_LG3_v3 + View
Corylus avellana Haze_17080 Similar to IDN2: Protein INVOLVED IN DE NOVO 2 (Arabidopsis thaliana OX%3D3702) 11 + View
Corylus avellana Haze_24107 Similar to IDN2: Protein INVOLVED IN DE NOVO 2 (Arabidopsis thaliana OX%3D3702) 6 + View
Coffea canephora Cc02_g07680 Putative XH/XS domain-containing protein chr2 - View
Coffea canephora Cc01_g12950 Putative XH/XS domain-containing protein chr1 + View
Citrus clementina Ciclev10030937m.g scaffold_4 + View
Citrus clementina Ciclev10029911m.g scaffold_8 + View
Carpinus fangiana Cfa011512 Cfa04 + View
Carpinus fangiana Cfa001459 Cfa01 - View
Carya illinoinensis CiPaw.01G288600 PTHR21596:SF25 - TRANSCRIPTION REGULATOR-LIKE-RELATED Chr01 + View
Carya illinoinensis CiPaw.02G184800 PTHR21596//PTHR21596:SF25 - RIBONUCLEASE P SUBUNIT P38 // TRANSCRIPTION REGULATOR-LIKE-RELATED Chr02 + View
Carya illinoinensis CiPaw.13G093400 PTHR21596//PTHR21596:SF23 - RIBONUCLEASE P SUBUNIT P38 // SUBFAMILY NOT NAMED Chr13 - View
Citrullus lanatus ClCG03G001460 XH/XS domain-containing protein LENGTH=554 CG_Chr03 - View
Citrullus lanatus ClCG07G003400 XH/XS domain-containing family protein CG_Chr07 - View
Cucumis melo MELO3C020627.2 factor of DNA methylation 4 chr12 - View
Carica papaya Cpa.g.sc1.418 supercontig_1 + View
Carica papaya Cpa.g.sc81.135 supercontig_81 - View
Chenopodium quinoa AUR62039365 Protein of unknown function C_Quinoa_Scaffold_4317 - View
Chenopodium quinoa AUR62012099 IDN2: Protein INVOLVED IN DE NOVO 2 C_Quinoa_Scaffold_1995 + View
Chenopodium quinoa AUR62001777 FDM4: Factor of DNA methylation 4 C_Quinoa_Scaffold_2716 - View
Chenopodium quinoa AUR62009565 IDN2: Protein INVOLVED IN DE NOVO 2 C_Quinoa_Scaffold_2493 - View
Cucumis sativus L. CsaV3_5G008130 protein INVOLVED IN DE NOVO 2 chr5 - View
Daucus carota DCAR_011713 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv43139 GWHABJS00000085 - View
Davidia involucrata Dinv04172 GWHABJS00000007 + View
Davidia involucrata Dinv03039 GWHABJS00000004 + View
Davidia involucrata Dinv26027 GWHABJS00000009 - View
Durio zibethinus Duzib114G0908 NW_019167926.1 + View
Durio zibethinus Duzib150G0788 NW_019167882.1 + View
Erigeron canadensis ECA238G2608 Conyza_canadensis_scaffold:6 + View
Erigeron canadensis ECA232G4779 Conyza_canadensis_scaffold:2 - View
Erigeron canadensis ECA233G6242 Conyza_canadensis_scaffold:1 - View
Erigeron canadensis ECA236G0987 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.B02356 Chr02 - View
Eucalyptus grandis Eucgr.G02937 Chr07 + View
Fragaria x ananassa FAN25G3553 PTHR21596//PTHR21596:SF23 - RIBONUCLEASE P SUBUNIT P38 // SUBFAMILY NOT NAMED Fvb3-1 - View
Fragaria x ananassa FAN16G0592 PTHR21596//PTHR21596:SF23 - RIBONUCLEASE P SUBUNIT P38 // SUBFAMILY NOT NAMED Fvb3-3 + View
Fragaria x ananassa FAN06G1934 PTHR21596//PTHR21596:SF25 - RIBONUCLEASE P SUBUNIT P38 // TRANSCRIPTION REGULATOR-LIKE-RELATED Fvb7-2 + View
Fragaria x ananassa FAN01G1116 PTHR21596:SF25 - TRANSCRIPTION REGULATOR-LIKE-RELATED Fvb7-4 - View
Fragaria x ananassa FAN11G2032 PTHR21596//PTHR21596:SF23 - RIBONUCLEASE P SUBUNIT P38 // SUBFAMILY NOT NAMED Fvb3-4 - View
Fragaria x ananassa FAN01G2968 PTHR21596:SF25 - TRANSCRIPTION REGULATOR-LIKE-RELATED Fvb7-4 - View
Fragaria x ananassa FAN03G0173 PTHR21596//PTHR21596:SF25 - RIBONUCLEASE P SUBUNIT P38 // TRANSCRIPTION REGULATOR-LIKE-RELATED Fvb7-3 - View
Fragaria x ananassa FAN06G1487 PTHR21596//PTHR21596:SF25 - RIBONUCLEASE P SUBUNIT P38 // TRANSCRIPTION REGULATOR-LIKE-RELATED Fvb7-2 - View
Fragaria x ananassa FAN21G2387 KOG2910 - Uncharacterized conserved protein predicted to be involved in protein sorting Fvb3-2 + View
Fragaria vesca FvH4_7g22690 PTHR21596:SF25 - TRANSCRIPTION REGULATOR-LIKE-RELATED Fvb7 + View
Gossypium hirsutum Gohir.A05G349100 PTHR21596//PTHR21596:SF25 - RIBONUCLEASE P SUBUNIT P38 // TRANSCRIPTION REGULATOR-LIKE-RELATED A05 - View
Gossypium hirsutum Gohir.D10G230050 PTHR21596//PTHR21596:SF25 - RIBONUCLEASE P SUBUNIT P38 // TRANSCRIPTION REGULATOR-LIKE-RELATED D10 + View
Gossypium hirsutum Gohir.A10G220200 PTHR21596//PTHR21596:SF23//PTHR21596:SF3 - RIBONUCLEASE P SUBUNIT P38 // SUBFAMILY NOT NAMED // F16A14.2-RELATED A10 + View
Gossypium hirsutum Gohir.A13G227232 PTHR21596//PTHR21596:SF23 - RIBONUCLEASE P SUBUNIT P38 // SUBFAMILY NOT NAMED A13 - View
Gossypium hirsutum Gohir.D06G172350 PTHR21596//PTHR21596:SF25 - RIBONUCLEASE P SUBUNIT P38 // TRANSCRIPTION REGULATOR-LIKE-RELATED D06 - View
Gossypium hirsutum Gohir.A06G166800 PTHR21596//PTHR21596:SF25 - RIBONUCLEASE P SUBUNIT P38 // TRANSCRIPTION REGULATOR-LIKE-RELATED A06 - View
Gossypium hirsutum Gohir.D13G232600 PTHR21596//PTHR21596:SF23 - RIBONUCLEASE P SUBUNIT P38 // SUBFAMILY NOT NAMED D13 - View
Glycine max Glyma.11G219200 PTHR21596//PTHR21596:SF25 - RIBONUCLEASE P SUBUNIT P38 // TRANSCRIPTION REGULATOR-LIKE-RELATED Gm11 + View
Glycine max Glyma.14G068100 PTHR21596//PTHR21596:SF25 - RIBONUCLEASE P SUBUNIT P38 // TRANSCRIPTION REGULATOR-LIKE-RELATED Gm14 - View
Glycine max Glyma.18G038200 PTHR21596//PTHR21596:SF3 - RIBONUCLEASE P SUBUNIT P38 // F16A14.2-RELATED Gm18 - View
Glycine max Glyma.15G037800 PTHR21596//PTHR21596:SF23 - RIBONUCLEASE P SUBUNIT P38 // SUBFAMILY NOT NAMED Gm15 - View
Glycine max Glyma.02G248400 PTHR21596//PTHR21596:SF25 - RIBONUCLEASE P SUBUNIT P38 // TRANSCRIPTION REGULATOR-LIKE-RELATED Gm02 + View
Glycine max Glyma.13G336500 PTHR21596//PTHR21596:SF23 - RIBONUCLEASE P SUBUNIT P38 // SUBFAMILY NOT NAMED Gm13 + View
Gossypium raimondii Gorai.010G201300 Chr10 - View
Gossypium raimondii Gorai.011G262700 Chr11 + View
Gossypium raimondii Gorai.013G263400 Chr13 - View
Gossypium raimondii Gorai.012G071000 Chr12 + View
Helianthus annuus HanXRQChr08g0220791 Putative uncharacterised domain XH HanXRQChr08 + View
Helianthus annuus HanXRQChr07g0201371 Probable XH/XS domain-containing protein HanXRQChr07 + View
Helianthus annuus HanXRQChr05g0134911 Putative uncharacterised domain XH; XS domain; Zinc finger-XS domain HanXRQChr05 + View
Lupinus albus Lalb_Chr20g0116931 PTHR21596:SF25 - TRANSCRIPTION REGULATOR-LIKE-RELATED Lalb_Chr20 - View
Lupinus albus Lalb_Chr17g0346241 PTHR21596:SF25 - TRANSCRIPTION REGULATOR-LIKE-RELATED Lalb_Chr17 + View
Lotus japonicus LjContig00141g0012250 PTHR21596//PTHR21596:SF25 - RIBONUCLEASE P SUBUNIT P38 // TRANSCRIPTION REGULATOR-LIKE-RELATED Contig00141 - View
Lotus japonicus Lj6g0013516 PTHR21596:SF25 - TRANSCRIPTION REGULATOR-LIKE-RELATED chr6 - View
Lotus japonicus Lj3g0006322 PTHR21596//PTHR21596:SF23 - RIBONUCLEASE P SUBUNIT P38 // SUBFAMILY NOT NAMED chr3 - View
Lonicera japonica Lj1C151T9 GWHAAZE00000001 - View
Lonicera japonica Lj2A1063T75 GWHAAZE00000002 + View
Lonicera japonica Lj1C939T2 GWHAAZE00000001 + View
Lonicera japonica Lj8C83G18 GWHAAZE00000008 - View
Lactuca sativa Lsat_1_v5_gn_8_15361 Lsat_1_v8_lg_8 - View
Lactuca sativa Lsat_1_v5_gn_2_119300 Lsat_1_v8_lg_2 - View
Magnolia biondii MBI14_g37192_MAGBIO AED:0.35 Chr14 + View
Magnolia biondii MBI05_g28389_MAGBIO AED:0.42 Chr05 + View
Malus domestica MD07G1200200 XH/XS domain-containing protein Chr07 + View
Malus domestica MD01G1135500 XH/XS domain-containing protein Chr01 + View
Manihot esculenta Manes.07G117100 Chromosome07 + View
Manihot esculenta Manes.02G132200 Chromosome02 - View
Medicago truncatula Medtr2g097000 XH/XS domain protein chr2 + View
Nelumbo nucifera Nn2g11127 chr2 + View
Olea europaea Oeu053900.1 chr20 - View
Olea europaea Oeu048234.1 chr12 - View
Oryza sativa ssp. japonica Os12g0572500 Region of unknown function XH domain containing protein. chr12 + View
Petunia axillaris Peaxi162Scf00658g00840 XH/XS domain-containing protein Peaxi162Scf00658 + View
Punica granatum PGR044G1583 NC_045134.1 + View
Punica granatum PGR142G1711 NC_045128.1 + View
Punica granatum PGR102G0388 NC_045129.1 + View
Prunus persica Prupe.2G236900 PTHR21596:SF25 - TRANSCRIPTION REGULATOR-LIKE-RELATED Pp02 + View
Prunus persica Prupe.6G075600 PTHR21596//PTHR21596:SF23 - RIBONUCLEASE P SUBUNIT P38 // SUBFAMILY NOT NAMED Pp06 - View
Pisum sativum Psat5g123840 XS domain chr5LG3 + View
Papaver somniferum PSO151G0187 NW_020650971.1 - View
Populus trichocarpa Potri.001G240666 PTHR21596//PTHR21596:SF23 - RIBONUCLEASE P SUBUNIT P38 // SUBFAMILY NOT NAMED Chr01 + View
Populus trichocarpa Potri.010G202700 PTHR21596//PTHR21596:SF25 - RIBONUCLEASE P SUBUNIT P38 // TRANSCRIPTION REGULATOR-LIKE-RELATED Chr10 - View
Phaseolus vulgaris Phvul.L005943 PTHR21596//PTHR21596:SF23 - RIBONUCLEASE P SUBUNIT P38 // SUBFAMILY NOT NAMED scaffold_15 + View
Phaseolus vulgaris Phvul.001G232400 Chr01 + View
Quercus lobata QL08p059586 8 - View
Quercus lobata QL01p031634 1 - View
Rosa chinensis RcHm_v2.0_Chr1g0367771 RcHm_v2.0_Chr1 + View
Rhododendron simsii Rhsim01G0228300 chr01 + View
Rhododendron simsii Rhsim09G0166600 chr09 + View
Rhododendron simsii Rhsim13G0081900 chr13 - View
Rhododendron simsii Rhsim03G0129700 chr03 - View
Striga asiatica SGA_v2.0_scaffold221G42664 scaffold221 - View
Salvia bowleyana SalBow6G6895 GWHASIU00000002 - View
Salix brachista Sabra08G0041400 GWHAAZH00000008 + View
Salix brachista Sabra16G0145500 GWHAAZH00000016 + View
Simmondsia chinensis Sc10g0001670 GWHAASQ00000010 + View
Simmondsia chinensis Sc21g0005840 GWHAASQ00000021 + View
Sechium edule Sed0022378 LG07 - View
Sechium edule Sed0028116 LG04 - View
Sechium edule Sed0024690 LG13 + View
Solanum lycopersicum Solyc06g005550.3 XH/XS domain protein (AHRD V3.3 *** A0A2K3NHW6_TRIPR) SL4.0ch06 + View
Solanum lycopersicum Solyc06g076200.2 XH/XS domain protein (AHRD V3.3 *** A0A2K3NYB8_TRIPR) SL4.0ch06 + View
Solanum lycopersicum Solyc05g054420.4 XH/XS domain protein (AHRD V3.3 *** A0A2K3NYB8_TRIPR) SL4.0ch05 - View
Solanum pennellii Sopen06g001520 Encodes IDN2 (INVOLVED IN DE NOVO 2), a double-stranded RNA-binding protein involved in de novo methylation and small interfering RNA (siRNA)-mediated maintenance methylation. IND2 is a component of the RNA-directed DNA methylation pathway. | INVOLVED IN DE NOVO 2 (IDN2) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: response to cadmium ion, chromatin silencing, DNA methylation | LOCATED IN: cellular_component unknown | EXPRESSED IN: root | CONTAINS InterPro DOMAIN/s: Domain of unknown function XS , Domain of unknown function XH , Domain of unknown function, putative Zinc finger, XS/XH | BEST Arabidopsis thaliana protein match is: XH/XS domain-containing protein Spenn-ch06 + View
Solanum pennellii Sopen05g032910 Encodes IDN2 (INVOLVED IN DE NOVO 2), a double-stranded RNA-binding protein involved in de novo methylation and small interfering RNA (siRNA)-mediated maintenance methylation. IND2 is a component of the RNA-directed DNA methylation pathway. | INVOLVED IN DE NOVO 2 (IDN2) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: response to cadmium ion, chromatin silencing, DNA methylation | LOCATED IN: cellular_component unknown | EXPRESSED IN: root | CONTAINS InterPro DOMAIN/s: Domain of unknown function XS , Domain of unknown function XH , Domain of unknown function, putative Zinc finger, XS/XH | BEST Arabidopsis thaliana protein match is: XH/XS domain-containing protein Spenn-ch05 - View
Solanum pennellii Sopen06g032600 XH/XS domain-containing protein | CONTAINS InterPro DOMAIN/s: Domain of unknown function XS , Domain of unknown function XH , Domain of unknown function, putative Zinc finger, XS/XH | BEST Arabidopsis thaliana protein match is: XH/XS domain-containing protein Spenn-ch06 + View
Solanum tuberosum PGSC0003DMG400023431 XH/XS domain-containing protein ST4.03ch05 - View
Solanum tuberosum PGSC0003DMG400004408 XH/XS domain-containing protein ST4.03ch06 - View
Solanum tuberosum PGSC0003DMG400030322 XH/XS domain-containing protein ST4.03ch06 + View
Selenicereus undatus Hund18902 Scaffold_33675 - View
Selenicereus undatus Hund04950 Scaffold_19641 - View
Selenicereus undatus Hund13771 Scaffold_33679 + View
Trochodendron aralioides TAR369G0248 group18 - View
Trochodendron aralioides TAR623G0860 group7 + View
Theobroma cacao Thecc.09G320400 XH/XS domain-containing protein Chromosome_9 - View
Theobroma cacao Thecc.10G040300 XH/XS domain-containing protein Chromosome_10 - View
Tarenaya hassleriana THA.LOC104799341 protein INVOLVED IN DE NOVO 2-like NW_010968505.1 + View
Trifolium pratense TPR.G34311 Tp57577_TGAC_v2_LG7 + View
Trifolium pratense TPR.G3474 Tp57577_TGAC_v2_LG4 - View
Tripterygium wilfordii TWI15G1090 NC_052247.1 + View
Tripterygium wilfordii TWI63G1559 NC_052240.1 + View
Tripterygium wilfordii TWI75G1439 NC_052253.1 - View
Vaccinium macrocarpon vmacro03066 Similar to IDN2: Protein INVOLVED IN DE NOVO 2 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro07180 Similar to FDM1: Factor of DNA methylation 1 (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro14513 Similar to FDM4: Factor of DNA methylation 4 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0647G2364 CM024073.1 + View
Vigna mungo VMungo1080G1193 CM024079.1 - View
Vigna mungo VMungo1383G2212 CM024070.1 + View
Vitis vinifera GSVIVG01016528001 chr13 + View
Vitis vinifera GSVIVG01024947001 chr6 + View