Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0034976 PREDICTED: protein RDM1 [Vitis vinifera] Chr5 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr4.2392 chr4 - View
Actinidia chinensis Actinidia40129 Lachesis_group22 - View
Arabidopsis lyrata AL3G36980 scaffold_3 + View
Avicennia marina MSTRG.4047 ScioBoG_102837_HRSCAF_103074 + View
Aquilegia oxysepala Aqoxy2G03437 CHR02 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Q6C7EF PTHR36366//PTHR36366:SF1 - FAMILY NOT NAMED // PROTEIN RDM1 arahy.Tifrunner.gnm1.Arahy.05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.8FXP11 PTHR36366//PTHR36366:SF1 - FAMILY NOT NAMED // PROTEIN RDM1 arahy.Tifrunner.gnm1.Arahy.15 + View
Arabidopsis thaliana AT3G22680 RNA-DIRECTED DNA METHYLATION 1 Encodes RNA-DIRECTED DNA METHYLATION 1 (RDM1)%2C forming a complex with DMS3 (AT3G49250) and DRD1 (AT2G16390). This complex is termed DDR. The DDR complex is required for polymerase V transcripts and RNA-directed DNA methylation. RNA-DIRECTED DNA METHYLATION 1 (RDM1)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1950 (InterPro:IPR015270)%3B Has 26 Blast hits to 26 proteins in 8 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 26%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr3 + View
Amborella trichopoda ATR0665G390 AmTr_v1.0_scaffold00002 - View
Brassica carinata BcaC01g03429 ChrC01 - View
Brassica carinata BcaC05g28028 ChrC05 - View
Brassica carinata BcaB06g26379 ChrB06 + View
Brassica napus A03p42920 A03 + View
Brassica napus A05p26020 A05 - View
Brassica napus C05p40440 C05 - View
Brassica napus C03p52670 C03 + View
Brassica oleracea BolC3t17535H C3 + View
Brassica oleracea BolC5t32785H C5 - View
Brassica rapa BraA03t13436Z A03 + View
Brassica rapa BraA05t21487Z A05 - View
Capsicum annuum CAN.G1402.3 PGAv.1.6.scaffold1402 + View
Cannabis sativa CANSAT78G1519 NC_044376.1 + View
Cicer arietinum L. Ca_24412_v3 Ca_LG8_v3 - View
Corylus avellana Haze_11210 Similar to RDM1: Protein RDM1 (Arabidopsis thaliana OX%3D3702) 9 + View
Citrus clementina Ciclev10005993m.g scaffold_9 + View
Ceratophyllum demersum CDE07G0031 5 - View
Carpinus fangiana Cfa008463 Cfa03 - View
Cardamine hirsuta CARHR098560 RNA-DIRECTED DNA METHYLATION 1 Chr3 + View
Carya illinoinensis CiPaw.02G122700 PTHR36366:SF1 - PROTEIN RDM1 Chr02 - View
Citrullus lanatus ClCG05G004990 RNA-DIRECTED DNA METHYLATION 1 LENGTH=163 CG_Chr05 - View
Cucumis melo MELO3C006513.2 protein RDM1 chr06 - View
Corchorus olitorius COL.COLO4_21526 Protein RDM1 AWUE01017684.1 + View
Capsella rubella Carub.0003s2284 PTHR36366//PTHR36366:SF1 - FAMILY NOT NAMED // PROTEIN RDM1 scaffold_3 + View
Cucumis sativus L. CsaV3_3G013040 protein RDM1 chr3 - View
Durio zibethinus Duzib212G0360 NW_019168026.1 - View
Eucalyptus grandis Eucgr.H03428 Chr08 - View
Erythranthe guttata Migut.G00365 scaffold_7 + View
Eutrema salsugineum Thhalv10021679m.g PTHR36366:SF1 - PROTEIN RDM1 scaffold_13 - View
Fragaria x ananassa FAN12G2319 PTHR36366:SF1 - PROTEIN RDM1 Fvb4-3 - View
Fragaria x ananassa FAN22G0369 PTHR36366:SF1 - PROTEIN RDM1 Fvb4-1 + View
Fragaria vesca FvH4_4g00760 PTHR36366:SF1 - PROTEIN RDM1 Fvb4 + View
Glycine max Glyma.01G235900 PTHR36366//PTHR36366:SF1 - FAMILY NOT NAMED // PROTEIN RDM1 Gm01 + View
Glycine max Glyma.11G007300 PTHR36366//PTHR36366:SF1 - FAMILY NOT NAMED // PROTEIN RDM1 Gm11 - View
Lupinus albus Lalb_Chr16g0376451 PTHR36366:SF1 - PROTEIN RDM1 Lalb_Chr16 - View
Lupinus albus Lalb_Chr05g0211101 PTHR36366//PTHR36366:SF1 - FAMILY NOT NAMED // PROTEIN RDM1 Lalb_Chr05 - View
Lotus japonicus LjContig00408g0013113 PTHR36366//PTHR36366:SF1 - FAMILY NOT NAMED // PROTEIN RDM1 Contig00408 - View
Lonicera japonica Lj3A731T58 GWHAAZE00000003 - View
Malus domestica MD16G1197500 RNA-DIRECTED DNA METHYLATION 1 Chr16 + View
Manihot esculenta Manes.03G175300 Chromosome03 - View
Manihot esculenta Manes.15G031200 Chromosome15 + View
Medicago truncatula Medtr5g006580 DNA polymerase delta, subunit 4 chr5 - View
Nelumbo nucifera Nn1g02390 chr1 + View
Nicotiana tabacum Nitab4.5_0000085g0360 Protein RDM1 Nitab4.5_0000085 - View
Petunia axillaris Peaxi162Scf00092g00016 RNA-DIRECTED DNA METHYLATION 1 Peaxi162Scf00092 - View
Punica granatum PGR142G1722 NC_045128.1 + View
Prunus persica Prupe.1G018500 PTHR36366:SF1 - PROTEIN RDM1 Pp01 + View
Pisum sativum Psat2g190440 Domain of unknown function(DUF1950) chr2LG1 + View
Papaver somniferum PSO210G5857 NC_039359.1 + View
Papaver somniferum PSO170G4884 NC_039360.1 + View
Populus trichocarpa Potri.010G083751 PTHR36366//PTHR36366:SF1 - FAMILY NOT NAMED // PROTEIN RDM1 Chr10 - View
Populus trichocarpa Potri.008G155800 PTHR36366//PTHR36366:SF1 - FAMILY NOT NAMED // PROTEIN RDM1 Chr08 + View
Phaseolus vulgaris Phvul.002G043400 PTHR36366:SF1 - PROTEIN RDM1 Chr02 + View
Quercus lobata QL06p001566 6 - View
Rhododendron simsii Rhsim02G0027200 chr02 + View
Rhododendron simsii Rhsim04G0199500 chr04 - View
Striga asiatica SGA_v2.0_scaffold191G40487 scaffold191 - View
Salvia bowleyana SalBow2G0844 GWHASIU00000007 - View
Salix brachista Sabra10G0059200 GWHAAZH00000010 + View
Salix brachista Sabra08G0118600 GWHAAZH00000008 + View
Simmondsia chinensis Sc19g0004030 GWHAASQ00000019 - View
Sechium edule Sed0012407 LG12 + View
Sechium edule Sed0024336 LG02 + View
Solanum lycopersicum Solyc09g082420.1 protein RDM1-like (AHRD V3.3 *-* A0A1U7VRZ0_NICSY) SL4.0ch09 - View
Schrenkiella parvula Sp3g20440 PTHR36366:SF1 - PROTEIN RDM1 ch3-1 + View
Solanum pennellii Sopen09g031290 Encodes RNA-DIRECTED DNA METHYLATION 1 (RDM1), forming a complex with DMS3 (AT3G49250) and DRD1 (AT2G16390). This complex is termed DDR. The DDR complex is required for polymerase V transcripts and RNA-directed DNA methylation. | RNA-DIRECTED DNA METHYLATION 1 (RDM1) | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1950 Spenn-ch09 - View
Solanum tuberosum PGSC0003DMG400032269 Protein RDM1 ST4.03ch09 + View
Trochodendron aralioides TAR362G0393 group17 + View
Trochodendron aralioides TAR633G0827 group2 - View
Tarenaya hassleriana THA.LOC104803042 protein RDM1-like isoform X1 NW_010970490.1 + View
Tarenaya hassleriana THA.LOC104808564 protein RDM1 NW_010964923.1 + View
Trifolium pratense TPR.G37887 Tp57577_TGAC_v2_LG2 + View
Tripterygium wilfordii TWI73G1209 NC_052232.1 - View
Vaccinium macrocarpon vmacro15360 Similar to RDM1: Protein RDM1 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01018017001 chr5 + View