Gene: PGR142G1722
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR142G1722
- Transcript Identifier PGR142G1722.02
- Gene Type Coding gene
- Location NC_045128.1 : 33903010-33904015 : positive
Gene Family Information
- ID HOM05D004187
- #Genes/#Species 169/82
- Phylogenetic origin
- ID ORTHO05D004890
- #Genes/#Species 168/82
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- pid XP_031378173.1
- name LOC116193568
- name XM_031522313.1
- id gene-LOC116193568
- uniprot A0A6P8CAQ8
Descriptions
- product protein RDM1-like, transcript variant X1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0044030 | IEA | GOA Database | regulation of DNA methylation | |
| GO:0044030 | IEA | InterPro | regulation of DNA methylation | |
| GO:0006306 | ISO | PLAZA Integrative Orthology | DNA methylation | AT3G22680 |
| GO:0070918 | ISO | PLAZA Integrative Orthology | production of small RNA involved in gene silencing by RNA | AT3G22680 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G22680 |
| GO:0043621 | ISO | PLAZA Integrative Orthology | protein self-association | AT3G22680 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IEA | InterPro | nucleus | |
| GO:0000419 | ISO | PLAZA Integrative Orthology | RNA polymerase V complex | AT3G22680 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.5.1.14.3 | Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.DNA methylation accessory complex (DDR).component RDM1 |