Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
| Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|---|
| Aethionema arabicum | Aa31LG11G3180 | LG-11 | + | View | |
| Acer truncatum | Atru.chr1.430 | chr1 | - | View | |
| Actinidia chinensis | Actinidia03126 | Lachesis_group3 | + | View | |
| Actinidia chinensis | Actinidia25881 | Lachesis_group22 | - | View | |
| Actinidia chinensis | Actinidia34125 | Lachesis_group3 | + | View | |
| Actinidia chinensis | Actinidia31826 | Lachesis_group21 | + | View | |
| Arabidopsis lyrata | AL6G35160 | scaffold_6 | + | View | |
| Avicennia marina | MSTRG.27106 | ScioBoG_8578_HRSCAF_8617 | + | View | |
| Amaranthus hybridus | Ah.13g068620 | Cleavage and polyadenylation specificity factor subunit 2 (Cleavage and polyadenylation specificity factor 100 kDa subunit) (CPSF 100 kDa subunit) | AmaHy_arrow1_Scaffold_13 | - | View |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.D3UWCH | K09598 - signal peptide peptidase-like 3 [EC:3.4.23.-] (SPPL3) | arahy.Tifrunner.gnm1.Arahy.19 | + | View |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.UN08B9 | K09598 - signal peptide peptidase-like 3 [EC:3.4.23.-] (SPPL3) | arahy.Tifrunner.gnm1.Arahy.09 | - | View |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.JGS186 | K14402 - cleavage and polyadenylation specificity factor subunit 2 (CPSF2, CFT2) | arahy.Tifrunner.gnm1.Arahy.05 | - | View |
| Arabidopsis thaliana | AT5G23880 | cleavage and polyadenylation specificity factor 100 Encodes a protein similar to the 100kD subunit of cleavage and polyadenylation specificity factor (CPSF)%2C the factor responsible for the recognition of the AAUAAA motif during mRNA polyadenylation. The protein interacts with a portion of a nuclear poly(A) polymerase. It is likely to be a part of the mRNA 3'end formation apparatus. cleavage and polyadenylation specificity factor 100 (CPSF100)%3B FUNCTIONS IN: protein binding%2C DNA binding%3B INVOLVED IN: mRNA cleavage%2C mRNA polyadenylation%2C posttranscriptional gene silencing by RNA%2C embryo development ending in seed dormancy%3B LOCATED IN: mRNA cleavage and polyadenylation specificity factor complex%2C nucleus%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Beta-Casp domain (InterPro:IPR022712)%2C RNA-metabolising metallo-beta-lactamase (InterPro:IPR011108)%2C Beta-lactamase-like (InterPro:IPR001279)%3B BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 73-I (TAIR:AT1G61010.3)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). | Chr5 | + | View |
| Brassica napus | A06p34690 | A06 | + | View | |
| Brassica rapa | BraA06t26396Z | A06 | + | View | |
| Beta vulgaris | EL10Ac3g05612 | K14402 - cleavage and polyadenylation specificity factor subunit 2 (CPSF2, CFT2) | Chr3_EL10_PGA_scaffold7 | - | View |
| Cicer arietinum L. | Ca_10747_v3 | Ca_LG4_v3 | - | View | |
| Corylus avellana | Haze_13669 | Similar to CPSF100: Cleavage and polyadenylation specificity factor subunit 2 (Arabidopsis thaliana OX%3D3702) | 5 | - | View |
| Coffea canephora | Cc02_g02790 | Cleavage and polyadenylation specificity factor subunit 2 | chr2 | - | View |
| Citrus clementina | Ciclev10005207m.g | scaffold_9 | + | View | |
| Ceratophyllum demersum | CDE06G0059 | 4 | + | View | |
| Cardamine hirsuta | CARHR189680 | Cleavage and polyadenylation specificity factor subunit 2 | Chr6 | - | View |
| Carya illinoinensis | CiPaw.04G072000 | K09598 - signal peptide peptidase-like 3 [EC:3.4.23.-] (SPPL3) | Chr04 | + | View |
| Carya illinoinensis | CiPaw.03G108000 | PTHR12174:SF22 - SIGNAL PEPTIDE PEPTIDASE-LIKE 3 | Chr03 | + | View |
| Citrullus lanatus | ClCG05G008130 | Signal peptide peptidase family protein | CG_Chr05 | + | View |
| Cucumis melo | MELO3C006918.2 | Signal peptide peptidase-like protein | chr06 | + | View |
| Carica papaya | Cpa.g.sc107.68 | supercontig_107 | + | View | |
| Chenopodium quinoa | AUR62015961 | CPSF100: Cleavage and polyadenylation specificity factor subunit 2 | C_Quinoa_Scaffold_3256 | - | View |
| Chenopodium quinoa | AUR62021167 | CPSF100: Cleavage and polyadenylation specificity factor subunit 2 | C_Quinoa_Scaffold_1783 | - | View |
| Capsella rubella | Carub.0006s2160 | K14402 - cleavage and polyadenylation specificity factor subunit 2 (CPSF2, CFT2) | scaffold_6 | + | View |
| Cucumis sativus L. | CsaV3_3G017210 | Signal peptide peptidase-like 3 | chr3 | + | View |
| Daucus carota | DCAR_010298 | hypothetical protein | DCARv2_Chr3 | - | View |
| Davidia involucrata | Dinv28421 | GWHABJS00000004 | - | View | |
| Durio zibethinus | Duzib205G0735 | NW_019168381.1 | + | View | |
| Durio zibethinus | Duzib068G1421 | NW_019167838.1 | - | View | |
| Durio zibethinus | Duzib084G0847 | NW_019167827.1 | - | View | |
| Erigeron canadensis | ECA238G4262 | Conyza_canadensis_scaffold:6 | + | View | |
| Erigeron canadensis | ECA232G4342 | Conyza_canadensis_scaffold:2 | - | View | |
| Eucalyptus grandis | Eucgr.K00275 | Chr11 | + | View | |
| Eucalyptus grandis | Eucgr.A02776 | Chr01 | - | View | |
| Erythranthe guttata | Migut.F01110 | scaffold_6 | + | View | |
| Eutrema salsugineum | Thhalv10003707m.g | K14402 - cleavage and polyadenylation specificity factor subunit 2 (CPSF2, CFT2) | scaffold_6 | + | View |
| Fragaria x ananassa | FAN03G0857 | K14402 - cleavage and polyadenylation specificity factor subunit 2 (CPSF2, CFT2) | Fvb7-3 | - | View |
| Fragaria x ananassa | FAN03G1172 | PF00753//PF07521//PF10996//PF13299 - Metallo-beta-lactamase superfamily (Lactamase_B) // RNA-metabolising metallo-beta-lactamase (RMMBL) // Beta-Casp domain (Beta-Casp) // Cleavage and polyadenylation factor 2 C-terminal (CPSF100_C) | Fvb7-3 | - | View |
| Fragaria x ananassa | FAN10G0118 | K14402 - cleavage and polyadenylation specificity factor subunit 2 (CPSF2, CFT2) | Fvb7-1 | + | View |
| Fragaria x ananassa | FAN06G4426 | K14402 - cleavage and polyadenylation specificity factor subunit 2 (CPSF2, CFT2) | Fvb7-2 | + | View |
| Fragaria x ananassa | FAN10G0587 | K09598 - signal peptide peptidase-like 3 [EC:3.4.23.-] (SPPL3) | Fvb7-1 | + | View |
| Fragaria x ananassa | FAN01G0872 | K14402 - cleavage and polyadenylation specificity factor subunit 2 (CPSF2, CFT2) | Fvb7-4 | - | View |
| Fragaria x ananassa | FAN06G3579 | K14402 - cleavage and polyadenylation specificity factor subunit 2 (CPSF2, CFT2) | Fvb7-2 | + | View |
| Fragaria vesca | FvH4_7g29650 | K09598 - signal peptide peptidase-like 3 [EC:3.4.23.-] (SPPL3) | Fvb7 | + | View |
| Gossypium hirsutum | Gohir.D12G258000 | K14402 - cleavage and polyadenylation specificity factor subunit 2 (CPSF2, CFT2) | D12 | - | View |
| Gossypium hirsutum | Gohir.A12G256700 | K14402 - cleavage and polyadenylation specificity factor subunit 2 (CPSF2, CFT2) | A12 | - | View |
| Gossypium hirsutum | Gohir.D11G009800 | PTHR12174//PTHR12174:SF22 - SIGNAL PEPTIDE PEPTIDASE // SIGNAL PEPTIDE PEPTIDASE-LIKE 3 | D11 | + | View |
| Glycine max | Glyma.10G234200 | K09598 - signal peptide peptidase-like 3 [EC:3.4.23.-] (SPPL3) | Gm10 | - | View |
| Glycine max | Glyma.20G160100 | K09598 - signal peptide peptidase-like 3 [EC:3.4.23.-] (SPPL3) | Gm20 | + | View |
| Glycine max | Glyma.09G136900 | K14402 - cleavage and polyadenylation specificity factor subunit 2 (CPSF2, CFT2) | Gm09 | + | View |
| Glycine max | Glyma.16G182300 | K14402 - cleavage and polyadenylation specificity factor subunit 2 (CPSF2, CFT2) | Gm16 | + | View |
| Gossypium raimondii | Gorai.007G011300 | Chr07 | + | View | |
| Gossypium raimondii | Gorai.008G276300 | Chr08 | - | View | |
| Hydrangea macrophylla | Hma1.2p1_1604F.1_g293320 | Hma1.2p1_1604F.1 | - | View | |
| Lupinus albus | Lalb_Chr03g0034671 | K14402 - cleavage and polyadenylation specificity factor subunit 2 (CPSF2, CFT2) | Lalb_Chr03 | - | View |
| Lupinus albus | Lalb_Chr02g0141101 | K09598 - signal peptide peptidase-like 3 [EC:3.4.23.-] (SPPL3) | Lalb_Chr02 | + | View |
| Lupinus albus | Lalb_Chr21g0305081 | K09598 - signal peptide peptidase-like 3 [EC:3.4.23.-] (SPPL3) | Lalb_Chr21 | + | View |
| Lotus japonicus | Lj2g0019958 | K14402 - cleavage and polyadenylation specificity factor subunit 2 (CPSF2, CFT2) | chr2 | - | View |
| Lotus japonicus | Lj5g0012518 | K09598 - signal peptide peptidase-like 3 [EC:3.4.23.-] (SPPL3) | chr5 | + | View |
| Lonicera japonica | Lj1C1000G16 | GWHAAZE00000001 | + | View | |
| Lactuca sativa | Lsat_1_v5_gn_2_132660 | Lsat_1_v8_lg_2 | - | View | |
| Lactuca sativa | Lsat_1_v5_gn_9_55320 | K09598 - signal peptide peptidase-like 3 [EC:3.4.23.-] (SPPL3) | Lsat_1_v8_lg_9 | - | View |
| Magnolia biondii | MBI18_g21568_MAGBIO | AED:0.00 | Chr18 | - | View |
| Malus domestica | MD07G1272800 | SIGNAL PEPTIDE PEPTIDASE-LIKE 1 | Chr07 | + | View |
| Malus domestica | MD01G1203500 | SIGNAL PEPTIDE PEPTIDASE-LIKE 1 | Chr01 | + | View |
| Manihot esculenta | Manes.06G149100 | Chromosome06 | + | View | |
| Medicago truncatula | Medtr1g100980 | signal peptide peptidase-like protein | chr1 | - | View |
| Nelumbo nucifera | Nn6g33443 | chr6 | + | View | |
| Nicotiana tabacum | Nitab4.5_0000084g0010 | Presenilin/signal peptide peptidase, Peptidase A22B, signal peptide peptidase | Nitab4.5_0000084 | + | View |
| Olea europaea | Oeu028430.1 | chr12 | + | View | |
| Olea europaea | Oeu061650.1 | chr1 | - | View | |
| Petunia axillaris | Peaxi162Scf00444g00532 | Cleavage and polyadenylation specificity factor subunit 2 | Peaxi162Scf00444 | - | View |
| Punica granatum | PGR042G1227 | NC_045130.1 | - | View | |
| Punica granatum | PGR142G0288 | NC_045128.1 | - | View | |
| Prunus persica | Prupe.2G296100 | Pp02 | + | View | |
| Pisum sativum | Psat6g198120 | Signal peptide peptidase | chr6LG2 | + | View |
| Populus trichocarpa | Potri.015G145600 | K09598 - signal peptide peptidase-like 3 [EC:3.4.23.-] (SPPL3) | Chr15 | + | View |
| Populus trichocarpa | Potri.012G142400 | K09598 - signal peptide peptidase-like 3 [EC:3.4.23.-] (SPPL3) | Chr12 | + | View |
| Phaseolus vulgaris | Phvul.007G071800 | K09598 - signal peptide peptidase-like 3 [EC:3.4.23.-] (SPPL3) | Chr07 | + | View |
| Phaseolus vulgaris | Phvul.004G114000 | K14402 - cleavage and polyadenylation specificity factor subunit 2 (CPSF2, CFT2) | Chr04 | + | View |
| Quercus lobata | QL09p013756 | 9 | + | View | |
| Rosa chinensis | RcHm_v2.0_Chr1g0377661 | RcHm_v2.0_Chr1 | + | View | |
| Rhododendron simsii | Rhsim09G0198600 | chr09 | + | View | |
| Rhododendron simsii | Rhsim03G0187300 | chr03 | + | View | |
| Salvia bowleyana | SalBow2G0905 | GWHASIU00000007 | + | View | |
| Salix brachista | Sabra12G0107100 | GWHAAZH00000012 | + | View | |
| Simmondsia chinensis | Sc13g0008810 | GWHAASQ00000013 | + | View | |
| Sechium edule | Sed0012622 | LG13 | + | View | |
| Sechium edule | Sed0009742 | LG07 | - | View | |
| Solanum lycopersicum | Solyc03g025540.3 | Cleavage and polyadenylation specificity factor subunit 2 (AHRD V3.3 *** A0A1U8FZM0_CAPAN) | SL4.0ch03 | - | View |
| Schrenkiella parvula | Sp2g23400 | K14402 - cleavage and polyadenylation specificity factor subunit 2 (CPSF2, CFT2) | ch2-4 | - | View |
| Solanum pennellii | Sopen03g004380 | Encodes a protein similar to the 100kD subunit of cleavage and polyadenylation specificity factor (CPSF), the factor responsible for the recognition of the AAUAAA motif during mRNA polyadenylation. The protein interacts with a portion of a nuclear poly(A) polymerase. It is likely to be a part of the mRNA 3end formation apparatus. | cleavage and polyadenylation specificity factor 100 (CPSF100) | FUNCTIONS IN: protein binding, DNA binding | INVOLVED IN: mRNA cleavage, mRNA polyadenylation, posttranscriptional gene silencing by RNA, embryo development ending in seed dormancy | LOCATED IN: mRNA cleavage and polyadenylation specificity factor complex, nucleus | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Beta-Casp domain , RNA-metabolising metallo-beta-lactamase , Beta-lactamase-like | BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 73-I | Spenn-ch03 | - | View |
| Solanum tuberosum | PGSC0003DMG400015784 | D-alanyl-D-alanine endopeptidase | ST4.03ch03 | + | View |
| Selenicereus undatus | Hund04760 | Scaffold_19641 | + | View | |
| Trochodendron aralioides | TAR375G0726 | group15 | + | View | |
| Theobroma cacao | Thecc.03G179000 | Cleavage and polyadenylation specificity factor 100-like protein | Chromosome_3 | - | View |
| Tarenaya hassleriana | THA.LOC104821393 | cleavage and polyadenylation specificity factor subunit 2 isoform X2 | NW_010966459.1 | - | View |
| Tripterygium wilfordii | TWI14G1085 | NC_052249.1 | + | View | |
| Tripterygium wilfordii | TWI23G1271 | NC_052239.1 | - | View | |
| Vaccinium macrocarpon | vmacro06665 | Similar to CPSF100: Cleavage and polyadenylation specificity factor subunit 2 (Arabidopsis thaliana OX%3D3702) | chr2_Vaccinium_macrocarpon_Stevens_v1 | - | View |
| Vaccinium macrocarpon | vmacro09831 | Similar to SPPL1: Signal peptide peptidase-like 1 (Arabidopsis thaliana OX%3D3702) | chr8_Vaccinium_macrocarpon_Stevens_v1 | - | View |
| Vigna mungo | VMungo0464G0478 | CM024077.1 | + | View | |
| Vigna mungo | VMungo0720G1061 | CM024071.1 | - | View | |
| Vitis vinifera | GSVIVG01028920001 | chr16 | + | View |