Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
| Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|---|
| Aethionema arabicum | Aa31LG1G27420 | LG-1 | + | View | |
| Acer truncatum | Atru.chr5.516 | chr5 | + | View | |
| Actinidia chinensis | Actinidia20892 | Lachesis_group6 | - | View | |
| Arabidopsis lyrata | AL4G45240 | scaffold_4 | + | View | |
| Avicennia marina | MSTRG.17279 | ScioBoG_19743_HRSCAF_19834 | + | View | |
| Avicennia marina | MSTRG.20843 | ScioBoG_26180_HRSCAF_26306 | + | View | |
| Amaranthus hybridus | Ah.05g180470 | ATP-dependent helicase BRM (EC 3.6.4.12) (Protein BRAHMA) (AtBRM) (Protein CHROMATIN REMODELING 2) (AtCHR2) | AmaHy_arrow1_Scaffold_5 | - | View |
| Aquilegia oxysepala | Aqoxy7G00269 | CHR07 | - | View | |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.K947VD | K11647 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-] (SMARCA2_4) | arahy.Tifrunner.gnm1.Arahy.04 | + | View |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.8BN0DB | K11647 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-] (SMARCA2_4) | arahy.Tifrunner.gnm1.Arahy.12 | + | View |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.03HQ0D | K11647 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-] (SMARCA2_4) | arahy.Tifrunner.gnm1.Arahy.14 | + | View |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.AXD4AC | K11647 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-] (SMARCA2_4) | arahy.Tifrunner.gnm1.Arahy.02 | + | View |
| Arabidopsis thaliana | AT2G46020 | transcription regulatory protein SNF2 Encodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C%2C also with AtSWI3B%2C but not with AtSWI3A or AtSWI3D. BRAHMA (BRM)%3B FUNCTIONS IN: helicase activity%2C transcription regulator activity%2C DNA binding%2C ATP binding%3B INVOLVED IN: ATP-dependent chromatin remodeling%2C organ boundary specification between lateral organs and the meristem%2C regulation of gene expression%2C epigenetic%3B LOCATED IN: cytosol%2C nucleus%2C chromatin remodeling complex%3B EXPRESSED IN: 31 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine%2C QLQ (InterPro:IPR014978)%2C DEAD-like helicase%2C N-terminal (InterPro:IPR014001)%2C DNA/RNA helicase%2C C-terminal (InterPro:IPR001650)%2C Helicase%2C superfamily 1/2%2C ATP-binding domain (InterPro:IPR014021)%2C Bromodomain (InterPro:IPR001487)%2C SNF2-related (InterPro:IPR000330)%3B BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G28290.3)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). | Chr2 | + | View |
| Brassica napus | C04p72040 | C04 | + | View | |
| Brassica napus | A04p34220 | A04 | + | View | |
| Brassica oleracea | BolC4t28700H | C4 | + | View | |
| Brassica rapa | BraA04t18883Z | A04 | + | View | |
| Beta vulgaris | EL10Ac1g00397 | PTHR10799:SF577 - PROTEIN TAF-3, ISOFORM A | Chr1_EL10_PGA_scaffold3 | - | View |
| Capsicum annuum | CAN.G78.94 | PGAv.1.6.scaffold78 | + | View | |
| Cannabis sativa | CANSAT56G1829 | NC_044371.1 | - | View | |
| Cicer arietinum L. | Ca_10932_v3 | Ca_LG4_v3 | - | View | |
| Cicer arietinum L. | Ca_07936_v3 | Ca_LG3_v3 | + | View | |
| Cicer arietinum L. | Ca_23613_v3 | Ca_LG7_v3 | - | View | |
| Corylus avellana | Haze_15527 | Similar to BRM: ATP-dependent helicase BRM (Arabidopsis thaliana OX%3D3702) | 11 | + | View |
| Coffea canephora | Cc02_g38210 | ATP-dependent helicase BRM | chr2 | + | View |
| Citrus clementina | Ciclev10018438m.g | scaffold_3 | - | View | |
| Carpinus fangiana | Cfa003903 | Cfa01 | - | View | |
| Cardamine hirsuta | CARHR141280 | DNA helicase | Chr4 | + | View |
| Carya illinoinensis | CiPaw.01G063200 | PTHR10799:SF577 - PROTEIN TAF-3, ISOFORM A | Chr01 | + | View |
| Carya illinoinensis | CiPaw.02G032300 | PTHR10799:SF577 - PROTEIN TAF-3, ISOFORM A | Chr02 | + | View |
| Citrullus lanatus | ClCG05G001450 | DNA helicase, putative | CG_Chr05 | - | View |
| Cucumis melo | MELO3C006101.2 | ATP-dependent helicase BRM | chr06 | - | View |
| Corchorus olitorius | COL.COLO4_12729 | ATP-dependent helicase BRM-like protein | AWUE01014941.1 | + | View |
| Carica papaya | Cpa.g.sc11.23 | supercontig_11 | + | View | |
| Chenopodium quinoa | AUR62022585 | BRM: ATP-dependent helicase BRM | C_Quinoa_Scaffold_1870 | + | View |
| Chenopodium quinoa | AUR62004379 | BRM: ATP-dependent helicase BRM | C_Quinoa_Scaffold_4250 | + | View |
| Capsella rubella | Carub.0004s2871 | PTHR10799//PTHR10799:SF577 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // PROTEIN TAF-3, ISOFORM A | scaffold_4 | + | View |
| Cucumis sativus L. | CsaV3_3G008840 | ATP-dependent helicase BRM | chr3 | - | View |
| Daucus carota | DCAR_025198 | hypothetical protein | DCARv2_Chr7 | + | View |
| Davidia involucrata | Dinv43832 | GWHABJS00000016 | + | View | |
| Davidia involucrata | Dinv32495 | GWHABJS00000020 | + | View | |
| Durio zibethinus | Duzib138G0831 | NW_019167893.1 | + | View | |
| Erigeron canadensis | ECA234G0162 | Conyza_canadensis_scaffold:4 | + | View | |
| Erigeron canadensis | ECA236G4125 | Conyza_canadensis_scaffold:3 | + | View | |
| Eucalyptus grandis | Eucgr.D02305 | Chr04 | + | View | |
| Erythranthe guttata | Migut.B01772 | scaffold_2 | + | View | |
| Eutrema salsugineum | Thhalv10001280m.g | PTHR10799:SF577 - PROTEIN TAF-3, ISOFORM A | scaffold_22 | + | View |
| Fragaria x ananassa | FAN06G0929 | K11647 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-] (SMARCA2_4) | Fvb7-2 | + | View |
| Fragaria x ananassa | FAN01G0653 | K11647 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-] (SMARCA2_4) | Fvb7-4 | - | View |
| Fragaria x ananassa | FAN10G0475 | K11647 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-] (SMARCA2_4) | Fvb7-1 | + | View |
| Fragaria x ananassa | FAN03G1309 | K11647 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-] (SMARCA2_4) | Fvb7-3 | - | View |
| Fragaria x ananassa | FAN06G2979 | K11647 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-] (SMARCA2_4) | Fvb7-2 | + | View |
| Fragaria x ananassa | FAN10G3702 | K11647 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-] (SMARCA2_4) | Fvb7-1 | + | View |
| Fragaria vesca | FvH4_7g14720 | PTHR10799//PTHR10799:SF577 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // PROTEIN TAF-3, ISOFORM A | Fvb7 | + | View |
| Gossypium hirsutum | Gohir.A07G141800 | K11647 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-] (SMARCA2_4) | A07 | - | View |
| Gossypium hirsutum | Gohir.A12G108600 | K11647 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-] (SMARCA2_4) | A12 | - | View |
| Gossypium hirsutum | Gohir.D07G147500 | K11647 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-] (SMARCA2_4) | D07 | + | View |
| Gossypium hirsutum | Gohir.A11G090000 | K11647 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-] (SMARCA2_4) | A11 | + | View |
| Gossypium hirsutum | Gohir.D11G094400 | K11647 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-] (SMARCA2_4) | D11 | + | View |
| Glycine max | Glyma.09G257900 | K11647 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-] (SMARCA2_4) | Gm09 | - | View |
| Glycine max | Glyma.18G234700 | K11647 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-] (SMARCA2_4) | Gm18 | + | View |
| Glycine max | Glyma.16G035100 | K11647 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-] (SMARCA2_4) | Gm16 | - | View |
| Gossypium raimondii | Gorai.007G100800 | Chr07 | + | View | |
| Gossypium raimondii | Gorai.001G168700 | Chr01 | + | View | |
| Gossypium raimondii | Gorai.008G121100 | Chr08 | - | View | |
| Helianthus annuus | HanXRQChr04g0121221 | Putative SNF2-related, N-terminal domain; Bromodomain; Helicase, C-terminal; Glutamine-Leucine-Glutamine, QLQ; P-loop containing nucleoside triphosphate hydrolase; BRAHMA (BRM) ATPase | HanXRQChr04 | + | View |
| Lupinus albus | Lalb_Chr10g0096851 | K11647 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-] (SMARCA2_4) | Lalb_Chr10 | - | View |
| Lupinus albus | Lalb_Chr17g0339481 | KOG0387 - Transcription-coupled repair protein CSB/RAD26 (contains SNF2 family DNA-dependent ATPase domain) | Lalb_Chr17 | - | View |
| Lotus japonicus | Lj1g0023113 | PTHR10799//PTHR10799:SF577 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // PROTEIN TAF-3, ISOFORM A | chr1 | - | View |
| Lotus japonicus | Lj3g0005670 | PTHR10799//PTHR10799:SF577 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // PROTEIN TAF-3, ISOFORM A | chr3 | - | View |
| Lonicera japonica | Lj7C510T14 | GWHAAZE00000007 | - | View | |
| Lactuca sativa | Lsat_1_v5_gn_7_4220 | PTHR10799:SF577 - PROTEIN TAF-3, ISOFORM A | Lsat_1_v8_lg_7 | - | View |
| Lactuca sativa | Lsat_1_v5_gn_4_35861 | Lsat_1_v8_lg_4 | - | View | |
| Magnolia biondii | MBI17_g33790_MAGBIO | AED:0.10 | Chr17 | - | View |
| Malus domestica | MD01G1206100 | transcription regulatory protein SNF2 | Chr01 | + | View |
| Malus domestica | MD01G1065800 | transcription regulatory protein SNF2 | Chr01 | + | View |
| Malus domestica | MD07G1134800 | transcription regulatory protein SNF2 | Chr07 | - | View |
| Manihot esculenta | Manes.05G032800 | Chromosome05 | - | View | |
| Manihot esculenta | Manes.01G255300 | Chromosome01 | - | View | |
| Medicago truncatula | Medtr8g030550 | ATP-dependent helicase BRM | chr8 | - | View |
| Nelumbo nucifera | Nn6g33365 | chr6 | - | View | |
| Nelumbo nucifera | Nn1g01574 | chr1 | + | View | |
| Nicotiana tabacum | Nitab4.5_0000583g0220 | Helicase, superfamily 1/2, ATP-binding domain, Helicase, C-terminal, P-loop containing nucleoside triphosphate hydrolase, SNF2-related, Bromodomain | Nitab4.5_0000583 | + | View |
| Petunia axillaris | Peaxi162Scf00020g00814 | ATP-dependent helicase BRM | Peaxi162Scf00020 | + | View |
| Punica granatum | PGR031G3697 | NC_045127.1 | - | View | |
| Prunus persica | Prupe.2G172900 | PTHR10799:SF577 - PROTEIN TAF-3, ISOFORM A | Pp02 | + | View |
| Pisum sativum | Psat3g107600 | SNF2 family N-terminal domain | chr3LG5 | - | View |
| Populus trichocarpa | Potri.014G086500 | PTHR10799//PTHR10799:SF577 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // PROTEIN TAF-3, ISOFORM A | Chr14 | + | View |
| Populus trichocarpa | Potri.002G160900 | PTHR10799//PTHR10799:SF577 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // PROTEIN TAF-3, ISOFORM A | Chr02 | + | View |
| Phaseolus vulgaris | Phvul.010G100100 | K11647 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-] (SMARCA2_4) | Chr10 | + | View |
| Phaseolus vulgaris | Phvul.008G061000 | K11647 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-] (SMARCA2_4) | Chr08 | - | View |
| Quercus lobata | QL04p053980 | 4 | + | View | |
| Rosa chinensis | RcHm_v2.0_Chr1g0356661 | RcHm_v2.0_Chr1 | + | View | |
| Rhododendron simsii | Rhsim07G0013500 | chr07 | - | View | |
| Striga asiatica | SGA_v2.0_scaffold4G02298 | scaffold4 | - | View | |
| Salvia bowleyana | SalBow3G2941 | GWHASIU00000006 | - | View | |
| Salix brachista | Sabra14G0062700 | GWHAAZH00000014 | + | View | |
| Salix brachista | Sabra02G0127900 | GWHAAZH00000002 | + | View | |
| Simmondsia chinensis | Sc01g0003500 | GWHAASQ00000001 | + | View | |
| Sechium edule | Sed0000619 | LG02 | - | View | |
| Sechium edule | Sed0026227 | LG12 | + | View | |
| Sapria himalayana | SHI13459 | scaffold16_12220143 | + | View | |
| Solanum lycopersicum | Solyc01g094800.4 | ATP-dependent helicase BRM (AHRD V3.3 *** A0A2G2YXU8_CAPAN) | SL4.0ch01 | + | View |
| Schrenkiella parvula | Sp4g28080 | PTHR10799//PTHR10799:SF577 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // PROTEIN TAF-3, ISOFORM A | ch4-6 | + | View |
| Solanum pennellii | Sopen01g038570 | Encodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C, also with AtSWI3B, but not with AtSWI3A or AtSWI3D. | BRAHMA (BRM) | FUNCTIONS IN: helicase activity, transcription regulator activity, DNA binding, ATP binding | INVOLVED IN: ATP-dependent chromatin remodeling, organ boundary specification between lateral organs and the meristem, regulation of gene expression, epigenetic | LOCATED IN: cytosol, nucleus, chromatin remodeling complex | EXPRESSED IN: 31 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal , DNA/RNA helicase, C-terminal , Helicase, superfamily 1/2, ATP-binding domain , Bromodomain , SNF2-related | BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein | Spenn-ch01 | + | View |
| Solanum tuberosum | PGSC0003DMG401000051 | ATBRM/CHR2 | ST4.03ch01 | + | View |
| Selenicereus undatus | Hund16655 | Scaffold_33675 | + | View | |
| Trochodendron aralioides | TAR374G1169 | group12 | + | View | |
| Trochodendron aralioides | TAR375G0536 | group15 | + | View | |
| Theobroma cacao | Thecc.01G357200 | Chromatin remodeling complex subunit | Chromosome_1 | - | View |
| Tarenaya hassleriana | THA.LOC104803063 | ATP-dependent helicase BRM | NW_010970490.1 | + | View |
| Trifolium pratense | TPR.G37713 | Tp57577_TGAC_v2_LG6 | - | View | |
| Trifolium pratense | TPR.G16549 | Tp57577_TGAC_v2_scaf_265 | + | View | |
| Tripterygium wilfordii | TWI14G1411 | NC_052249.1 | + | View | |
| Tripterygium wilfordii | TWI23G0799 | NC_052239.1 | + | View | |
| Vaccinium macrocarpon | vmacro13264 | Similar to BRM: ATP-dependent helicase BRM (Arabidopsis thaliana OX%3D3702) | chr7_Vaccinium_macrocarpon_Stevens_v1 | - | View |
| Vaccinium macrocarpon | vmacro20931 | Similar to BRM: ATP-dependent helicase BRM (Arabidopsis thaliana OX%3D3702) | chr10_Vaccinium_macrocarpon_Stevens_v1 | + | View |
| Vigna mungo | VMungo1383G0951 | CM024070.1 | - | View | |
| Vigna mungo | VMungo0331G0955 | CM024078.1 | - | View | |
| Vitis vinifera | GSVIVG01026952001 | chr15 | - | View |