Gene: Lalb_Chr17g0339481
General Information
Structural Information
- Species Lupinus albus
- Gene Identifier Lalb_Chr17g0339481
- Transcript Identifier Lalb_Chr17g0339481
- Gene Type Coding gene
- Location Lalb_Chr17 : 8669902-8682104 : negative
Gene Family Information
- ID HOM05D000104
- #Genes/#Species 3097/100
- Phylogenetic origin
- ID ORTHO05D004024
- #Genes/#Species 194/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id Lalb_Chr17g0339481.v1
- pacid 44550839
- uniprot A0A6A4P5B6
Descriptions
- Description KOG0387 - Transcription-coupled repair protein CSB/RAD26 (contains SNF2 family DNA-dependent ATPase domain)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0040029 | IEA | GOA Database | regulation of gene expression, epigenetic | |
| GO:0040029 | IEA | InterPro | regulation of gene expression, epigenetic | |
| GO:0043044 | IEA | GOA Database | ATP-dependent chromatin remodeling | |
| GO:0043044 | IEA | InterPro | ATP-dependent chromatin remodeling | |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0004386 | IEA | GOA Database | helicase activity | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0070615 | IEA | GOA Database | nucleosome-dependent ATPase activity | |
| GO:0070615 | IEA | InterPro | nucleosome-dependent ATPase activity | |
| GO:0008094 | IEA | GOA Database | ATPase, acting on DNA | |
| GO:0008094 | IEA | InterPro | ATPase, acting on DNA | |
| GO:0005515 | IEA | InterPro | protein binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR031056 | BRAHMA (BRM) ATPase |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR001487 | Bromodomain |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR038718 | SNF2-like, N-terminal domain superfamily |
| IPR036427 | Bromodomain-like superfamily |
| IPR001650 | Helicase, C-terminal |
| IPR000330 | SNF2, N-terminal |
| Mapman id | Description |
|---|---|
| 12.4.1.1.1 | Chromatin organisation.nucleosome remodeling.SWI/SNF chromatin remodeling complexes.core modules.ATPase component SYD/BRM/MINU |