Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0029272 PREDICTED: photosystem II 22 kDa protein, chloroplastic [Vitis vinifera] Chr4 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G9330 LG-6 - View
Acer truncatum Atru.chr13.1462 chr13 - View
Actinidia chinensis Actinidia03469 Lachesis_group27 + View
Actinidia chinensis Actinidia29466 Lachesis_group7 + View
Arabidopsis lyrata AL1G52370 scaffold_1 + View
Amaranthus hybridus Ah.05g171100 Photosystem II 22 kDa protein, chloroplastic (CP22) AmaHy_arrow1_Scaffold_5 + View
Aquilegia oxysepala Aqoxy6G00218 CHR06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.L9FPHH K03542 - photosystem II 22kDa protein (psbS) arahy.Tifrunner.gnm1.Arahy.08 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.QP7RRL K03542 - photosystem II 22kDa protein (psbS) arahy.Tifrunner.gnm1.Arahy.17 + View
Arabidopsis thaliana AT1G44575 Chlorophyll A-B binding family protein Encoding PSII-S (CP22)%2C a ubiquitous pigment-binding protein associated with photosystem II (PSII) of higher plants. Involved in nonphotochemical quenching rather than in photosynthesis. Mutant has a normal violaxanthin cycle but has a limited capacity of quenching singlet excited chlorophylls and is tolerant to lipid peroxidation. NONPHOTOCHEMICAL QUENCHING 4 (NPQ4)%3B FUNCTIONS IN: chlorophyll binding%2C xanthophyll binding%3B INVOLVED IN: response to karrikin%2C nonphotochemical quenching%3B LOCATED IN: thylakoid%2C chloroplast thylakoid membrane%2C chloroplast%2C PSII associated light-harvesting complex II%2C membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B Has 242 Blast hits to 188 proteins in 60 species: Archae - 0%3B Bacteria - 31%3B Metazoa - 0%3B Fungi - 0%3B Plants - 197%3B Viruses - 0%3B Other Eukaryotes - 14 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaC08g42851 ChrC08 - View
Brassica napus A10p07510 A10 + View
Brassica oleracea BolC6t35202H C6 - View
Brassica rapa BraSC36t46054Z Brapa_scaffold_36 - View
Beta vulgaris EL10Ac1g01011 K03542 - photosystem II 22kDa protein (psbS) Chr1_EL10_PGA_scaffold3 - View
Cicer arietinum L. Ca_16558_v3 Ca_LG5_v3 - View
Corylus avellana Haze_00439 Similar to PSBS: Photosystem II 22 kDa protein, chloroplastic (Arabidopsis thaliana OX%3D3702) 1 + View
Coffea canephora Cc10_g11890 Photosystem II 22 kDa protein, chloroplastic chr10 - View
Citrus clementina Ciclev10002099m.g scaffold_5 - View
Ceratophyllum demersum CDE06G0290 4 - View
Carpinus fangiana Cfa016019 Cfa06 - View
Cardamine hirsuta CARHR035950 Photosystem II 22 kDa protein, chloroplast, putative Chr1 + View
Carya illinoinensis CiPaw.05G221300 K03542 - photosystem II 22kDa protein (psbS) Chr05 + View
Carya illinoinensis CiPaw.06G031000 K03542 - photosystem II 22kDa protein (psbS) Chr06 - View
Citrullus lanatus ClCG08G005640 Photosystem II 22 kDa protein CG_Chr08 - View
Cucumis melo MELO3C010608.2 Photosystem II 22 kDa family protein chr03 + View
Carica papaya Cpa.g.sc64.88 supercontig_64 - View
Chenopodium quinoa AUR62019079 PSBS: Photosystem II 22 kDa protein, chloroplastic C_Quinoa_Scaffold_3876 + View
Chenopodium quinoa AUR62014337 PSBS: Photosystem II 22 kDa protein, chloroplastic C_Quinoa_Scaffold_1566 + View
Capsella rubella Carub.0001s3521 K03542 - photosystem II 22kDa protein (psbS) scaffold_1 + View
Cucumis sativus L. CsaV3_6G034480 photosystem II 22 kDa protein, chloroplastic chr6 + View
Daucus carota DCAR_003551 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv07219 GWHABJS00000011 - View
Davidia involucrata Dinv27311 GWHABJS00000002 - View
Durio zibethinus Duzib116G0356 NW_019167949.1 - View
Eucalyptus grandis Eucgr.F03789 Chr06 - View
Erythranthe guttata Migut.C01123 scaffold_3 - View
Erythranthe guttata Migut.N03279 scaffold_14 - View
Eutrema salsugineum Thhalv10011718m.g K03542 - photosystem II 22kDa protein (psbS) scaffold_7 - View
Fragaria x ananassa FAN27G1910 K03542 - photosystem II 22kDa protein (psbS) Fvb2-1 - View
Fragaria x ananassa FAN20G2528 K03542 - photosystem II 22kDa protein (psbS) Fvb2-3 - View
Fragaria x ananassa FAN15G1035 K03542 - photosystem II 22kDa protein (psbS) Fvb2-4 - View
Fragaria x ananassa FAN24G1660 K03542 - photosystem II 22kDa protein (psbS) Fvb2-2 + View
Fragaria vesca FvH4_2g26970 K03542 - photosystem II 22kDa protein (psbS) Fvb2 - View
Gossypium hirsutum Gohir.D05G237400 K03542 - photosystem II 22kDa protein (psbS) D05 - View
Gossypium hirsutum Gohir.A01G189100 K03542 - photosystem II 22kDa protein (psbS) A01 - View
Gossypium hirsutum Gohir.A05G235100 K03542 - photosystem II 22kDa protein (psbS) A05 - View
Gossypium hirsutum Gohir.D01G180400 K03542 - photosystem II 22kDa protein (psbS) D01 + View
Glycine max Glyma.06G113200 K03542 - photosystem II 22kDa protein (psbS) Gm06 - View
Glycine max Glyma.04G249700 K03542 - photosystem II 22kDa protein (psbS) Gm04 + View
Gossypium raimondii Gorai.002G222200 Chr02 - View
Gossypium raimondii Gorai.009G245800 Chr09 - View
Lupinus albus Lalb_Chr11g0065911 K03542 - photosystem II 22kDa protein (psbS) Lalb_Chr11 - View
Lotus japonicus Lj1g0002097 K03542 - photosystem II 22kDa protein (psbS) chr1 + View
Lonicera japonica Lj7A340T34 GWHAAZE00000007 - View
Malus domestica MD15G1348200 Chlorophyll A-B binding family protein Chr15 + View
Malus domestica MD08G1162600 Chlorophyll A-B binding family protein Chr08 + View
Manihot esculenta Manes.18G077312 Chromosome18 - View
Medicago truncatula Medtr3g088040 light-harvesting complex I chlorophyll A/B-binding protein chr3 - View
Nelumbo nucifera Nn5g28290 chr5 - View
Nicotiana tabacum Nitab4.5_0000322g0160 Chlorophyll a/b binding protein domain, Chlorophyll A-B binding protein Nitab4.5_0000322 + View
Petunia axillaris Peaxi162Scf00051g00910 Photosystem II 22 kDa protein, chloroplastic Peaxi162Scf00051 - View
Punica granatum PGR042G4000 NC_045130.1 + View
Prunus persica Prupe.1G497100 Pp01 + View
Papaver somniferum PSO170G3857 NC_039360.1 + View
Phaseolus vulgaris Phvul.009G125100 K03542 - photosystem II 22kDa protein (psbS) Chr09 - View
Quercus lobata QL09p034583 9 + View
Rosa chinensis RcHm_v2.0_Chr6g0295831 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim06G0103300 chr06 + View
Striga asiatica SGA_v2.0_scaffold25G11130 scaffold25 + View
Salix brachista Sabra02G0065500 GWHAAZH00000002 + View
Salix brachista Sabra05G0134400 GWHAAZH00000005 - View
Sechium edule Sed0008649 LG01 + View
Solanum lycopersicum Solyc06g060340.3 Photosystem II 22 kDa protein, chloroplastic (AHRD V3.3 *** A0A1U8GV91_CAPAN) SL4.0ch06 + View
Schrenkiella parvula Sp1g33560 K03542 - photosystem II 22kDa protein (psbS) ch1-2 + View
Solanum pennellii Sopen06g020470 Photosystem II 22 kDa protein, chloroplast precursor (CP22) - Nicotiana tabacum (Common tobacco), Encoding PSII-S (CP22), a ubiquitous pigment-binding protein associated with photosystem II (PSII) of higher plants. Involved in nonphotochemical quenching rather than in photosynthesis. Mutant has a normal violaxanthin cycle but has a limited capacity of quenching singlet excited chlorophylls and is tolerant to lipid peroxidation. | NONPHOTOCHEMICAL QUENCHING 4 (NPQ4) | FUNCTIONS IN: chlorophyll binding, xanthophyll binding | INVOLVED IN: response to karrikin, nonphotochemical quenching | LOCATED IN: chloroplast thylakoid membrane, chloroplast, PSII associated light-harvesting complex II, membrane | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 14 growth stages Spenn-ch06 + View
Solanum tuberosum PGSC0003DMG400017556 Photosystem II 22 kDa protein, chloroplastic ST4.03ch06 + View
Selenicereus undatus Hund26809 Scaffold_2055 + View
Trochodendron aralioides TAR376G0195 group14 - View
Trochodendron aralioides TAR628G0971 group5 + View
Theobroma cacao Thecc.08G125500 Chlorophyll A-B binding family protein Chromosome_8 - View
Tarenaya hassleriana THA.LOC104817350 photosystem II 22 kDa protein%2C chloroplastic NW_010960187.1 - View
Vitis vinifera GSVIVG01008866001 chr18 + View