Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0029031 hypothetical protein CICLE_v10024925mg [Citrus clementina] Chr2 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G15030 LG-8 - View
Aethionema arabicum Aa31LG4G19310 LG-4 - View
Acer truncatum Atru.chr13.255 chr13 - View
Acer truncatum Atru.chr3.862 chr3 - View
Actinidia chinensis Actinidia17419 Lachesis_group11 - View
Actinidia chinensis Actinidia22952 Lachesis_group26 + View
Actinidia chinensis Actinidia17000 Lachesis_group28 - View
Arabidopsis lyrata AL5G31730 scaffold_5 - View
Arabidopsis lyrata AL3G50820 scaffold_3 + View
Avicennia marina MSTRG.2731 ScioBoG_102835_HRSCAF_103059 - View
Amaranthus hybridus Ah.03g149150 Vacuolar protein sorting-associated protein 35A (Protein ZIG SUPPRESSOR 3) (Vesicle protein sorting 35A) AmaHy_arrow1_Scaffold_3 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.FBLS0X K18468 - vacuolar protein sorting-associated protein 35 (VPS35) arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.2DB4EL K18468 - vacuolar protein sorting-associated protein 35 (VPS35) arahy.Tifrunner.gnm1.Arahy.05 + View
Arabidopsis thaliana AT1G75850 VPS35 homolog B VPS35 homolog B (VPS35B)%3B CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 35 (InterPro:IPR005378)%3B BEST Arabidopsis thaliana protein match is: VPS35 homolog A (TAIR:AT2G17790.1)%3B Has 618 Blast hits to 508 proteins in 209 species: Archae - 0%3B Bacteria - 1%3B Metazoa - 191%3B Fungi - 219%3B Plants - 72%3B Viruses - 0%3B Other Eukaryotes - 135 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT2G17790 vacuolar protein sorting-associated 35A-like protein Encodes a protein with similarity to yeast VPS35 which encodes a component of the retromer involved in retrograde endosomal transport. Mutants partially suppress the loss of VTI11 function in Arabidopsis and restores gravitropism in the double mutant. VPS35 homolog A (VPS35A)%3B CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 35 (InterPro:IPR005378)%3B BEST Arabidopsis thaliana protein match is: VPS35 homolog B (TAIR:AT1G75850.1)%3B Has 618 Blast hits to 509 proteins in 212 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 194%3B Fungi - 224%3B Plants - 73%3B Viruses - 0%3B Other Eukaryotes - 127 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT3G51310 VPS35 homolog C Homolog of yeast retromer subunit VPS35. Part of a retromer-like protein complex involved in endosome to lysosome protein transport. VPS35 homolog C (VPS35C)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: intracellular protein transport%2C endosome to lysosome transport%2C retrograde transport%2C endosome to Golgi%3B LOCATED IN: microsome%2C retromer complex%2C membrane%2C multivesicular body%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 35 (InterPro:IPR005378)%3B BEST Arabidopsis thaliana protein match is: VPS35 homolog A (TAIR:AT2G17790.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaC08g47009 ChrC08 + View
Brassica carinata BcaC08g47319 ChrC08 + View
Brassica carinata BcaB01g00530 ChrB01 + View
Brassica carinata BcaC06g36323 ChrC06 + View
Brassica napus C07p05380 C07 - View
Brassica napus A07p03160 A07 - View
Brassica napus C08p26590 C08 - View
Brassica napus A09p44360 A09 - View
Brassica napus C06p49820 C06 - View
Brassica oleracea BolC8t50272H C8 - View
Brassica oleracea BolC7t40939H C7 - View
Brassica rapa BraA07t28112Z A07 - View
Brassica rapa BraA09t39896Z A09 - View
Beta vulgaris EL10Ac1g02159 K18468 - vacuolar protein sorting-associated protein 35 (VPS35) Chr1_EL10_PGA_scaffold3 + View
Beta vulgaris EL10Ac6g15520 K18468 - vacuolar protein sorting-associated protein 35 (VPS35) Chr6_EL10_PGA_scaffold0 + View
Capsicum annuum CAN.G1274.34 PGAv.1.6.scaffold1274 - View
Capsicum annuum CAN.G354.47 PGAv.1.6.scaffold354 - View
Cicer arietinum L. Ca_24923_v3 Ca_LG8_v3 - View
Corylus avellana Haze_03729 Similar to VPS35B: Vacuolar protein sorting-associated protein 35B (Arabidopsis thaliana OX%3D3702) 2 + View
Corylus avellana Haze_22665 Similar to VPS35B: Vacuolar protein sorting-associated protein 35B (Arabidopsis thaliana OX%3D3702) 3 + View
Coffea canephora Cc10_g01430 Vacuolar protein sorting-associated protein 35B chr10 + View
Coffea canephora Cc07_g11090 Vacuolar protein sorting-associated protein 35B chr7 - View
Citrus clementina Ciclev10024925m.g scaffold_7 + View
Citrus clementina Ciclev10000335m.g scaffold_5 + View
Carpinus fangiana Cfa013979 Cfa05 + View
Carpinus fangiana Cfa007003 Cfa02 - View
Cardamine hirsuta CARHR160890 Vacuolar protein sorting 35 Chr5 - View
Cardamine hirsuta CARHR108210 Vacuolar sorting protein, putative Chr3 + View
Carya illinoinensis CiPaw.07G061300 K18468 - vacuolar protein sorting-associated protein 35 (VPS35) Chr07 - View
Carya illinoinensis CiPaw.08G067600 K18468 - vacuolar protein sorting-associated protein 35 (VPS35) Chr08 + View
Citrullus lanatus ClCG10G000570 Vacuolar protein sorting-associated protein 35 CG_Chr10 + View
Cucumis melo MELO3C013753.2 Vacuolar protein sorting-associated protein 35 chr06 + View
Corchorus olitorius COL.COLO4_22465 Vacuolar protein sorting-associated protein 35 AWUE01017971.1 - View
Carica papaya Cpa.g.sc26.302 supercontig_26 + View
Carica papaya Cpa.g.sc6.289 supercontig_6 - View
Chenopodium quinoa AUR62003335 VPS35B: Vacuolar protein sorting-associated protein 35B C_Quinoa_Scaffold_1000 + View
Chenopodium quinoa AUR62029503 VPS35A: Vacuolar protein sorting-associated protein 35A C_Quinoa_Scaffold_3036 - View
Capsella rubella Carub.0003s3194 K18468 - vacuolar protein sorting-associated protein 35 (VPS35) scaffold_3 + View
Capsella rubella Carub.0005s1768 K18468 - vacuolar protein sorting-associated protein 35 (VPS35) scaffold_5 - View
Cucumis sativus L. CsaV3_3G000650 Vacuolar protein sorting-associated protein 35 chr3 + View
Daucus carota DCAR_011606 hypothetical protein DCARv2_Chr3 - View
Daucus carota DCAR_009497 hypothetical protein DCARv2_Chr3 - View
Davidia involucrata Dinv40119 GWHABJS00000014 + View
Davidia involucrata Dinv33654 GWHABJS00000012 + View
Davidia involucrata Dinv31868 GWHABJS00000002 + View
Durio zibethinus Duzib116G0321 NW_019167949.1 + View
Durio zibethinus Duzib147G1566 NW_019168470.1 - View
Durio zibethinus Duzib093G0283 NW_019167937.1 - View
Erigeron canadensis ECA246G2517 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.I02329 Chr09 + View
Erythranthe guttata Migut.H02181 scaffold_8 - View
Erythranthe guttata Migut.C00861 scaffold_3 - View
Eutrema salsugineum Thhalv10022565m.g K18468 - vacuolar protein sorting-associated protein 35 (VPS35) scaffold_11 - View
Eutrema salsugineum Thhalv10010136m.g K18468 - vacuolar protein sorting-associated protein 35 (VPS35) scaffold_16 + View
Fragaria x ananassa FAN26G1734 K18468 - vacuolar protein sorting-associated protein 35 (VPS35) Fvb1-2 + View
Fragaria x ananassa FAN23G0707 K18468 - vacuolar protein sorting-associated protein 35 (VPS35) Fvb1-3 + View
Fragaria x ananassa FAN19G2887 K18468 - vacuolar protein sorting-associated protein 35 (VPS35) Fvb1-4 + View
Fragaria x ananassa FAN15G1281 K18468 - vacuolar protein sorting-associated protein 35 (VPS35) Fvb2-4 - View
Fragaria x ananassa FAN28G0319 PTHR11099:SF1 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 35A-RELATED Fvb1-1 - View
Fragaria x ananassa FAN20G2109 K18468 - vacuolar protein sorting-associated protein 35 (VPS35) Fvb2-3 - View
Fragaria vesca FvH4_1g11410 K18468 - vacuolar protein sorting-associated protein 35 (VPS35) Fvb1 + View
Fragaria vesca FvH4_2g38180 K18468 - vacuolar protein sorting-associated protein 35 (VPS35) Fvb2 + View
Gossypium hirsutum Gohir.A01G110300 PTHR11099//PTHR11099:SF1 - VACUOLAR SORTING PROTEIN 35 // VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 35A-RELATED A01 + View
Gossypium hirsutum Gohir.D05G187900 K18468 - vacuolar protein sorting-associated protein 35 (VPS35) D05 + View
Gossypium hirsutum Gohir.A05G185100 K18468 - vacuolar protein sorting-associated protein 35 (VPS35) A05 + View
Gossypium hirsutum Gohir.D01G096900 K18468 - vacuolar protein sorting-associated protein 35 (VPS35) D01 + View
Glycine max Glyma.01G164100 K18468 - vacuolar protein sorting-associated protein 35 (VPS35) Gm01 + View
Gossypium raimondii Gorai.002G122600 Chr02 + View
Gossypium raimondii Gorai.007G049400 Chr07 + View
Gossypium raimondii Gorai.009G193200 Chr09 + View
Helianthus annuus HanXRQChr15g0483861 Probable VPS35 homolog A HanXRQChr15 + View
Lupinus albus Lalb_Chr05g0212241 K18468 - vacuolar protein sorting-associated protein 35 (VPS35) Lalb_Chr05 + View
Lupinus albus Lalb_Chr09g0321591 K18468 - vacuolar protein sorting-associated protein 35 (VPS35) Lalb_Chr09 + View
Lotus japonicus Lj2g0024960 K18468 - vacuolar protein sorting-associated protein 35 (VPS35) chr2 - View
Lonicera japonica Lj4A222T55 GWHAAZE00000004 - View
Lonicera japonica Lj4A21G61 GWHAAZE00000004 - View
Lactuca sativa Lsat_1_v5_gn_3_72040 Lsat_1_v8_lg_3 + View
Malus domestica MD15G1242400 VPS35 homolog A Chr15 + View
Malus domestica MD15G1010200 VPS35 homolog B Chr15 + View
Malus domestica MD02G1126400 VPS35 homolog A Chr02 - View
Manihot esculenta Manes.01G148800 Chromosome01 - View
Manihot esculenta Manes.18G011700 Chromosome18 + View
Manihot esculenta Manes.02G107500 Chromosome02 - View
Medicago truncatula Medtr5g022610 vacuolar protein sorting-associated 35A-like protein chr5 - View
Nelumbo nucifera Nn5g30778 chr5 - View
Nelumbo nucifera Nn6g31995 chr6 + View
Nicotiana tabacum Nitab4.5_0001892g0120 Vacuolar protein sorting-associated protein 35 Nitab4.5_0001892 - View
Nicotiana tabacum Nitab4.5_0001685g0070 Vacuolar protein sorting-associated protein 35, Armadillo-type fold Nitab4.5_0001685 + View
Olea europaea Oeu048474.1 chr10 + View
Petunia axillaris Peaxi162Scf00635g00716 Vacuolar protein sorting-associated protein 35 Peaxi162Scf00635 - View
Punica granatum PGR119G0571 NC_045132.1 + View
Prunus persica Prupe.1G362700 K18468 - vacuolar protein sorting-associated protein 35 (VPS35) Pp01 + View
Prunus persica Prupe.7G171800 Pp07 - View
Pisum sativum Psat2g153040 Vacuolar protein sorting-associated protein 35 chr2LG1 + View
Papaver somniferum PSO541G0184 NC_039363.1 - View
Papaver somniferum PSO675G7018 NC_039358.1 - View
Populus trichocarpa Potri.002G019400 K18468 - vacuolar protein sorting-associated protein 35 (VPS35) Chr02 + View
Populus trichocarpa Potri.005G242100 K18468 - vacuolar protein sorting-associated protein 35 (VPS35) Chr05 - View
Populus trichocarpa Potri.007G061520 PTHR11099//PTHR11099:SF1 - VACUOLAR SORTING PROTEIN 35 // VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 35A-RELATED Chr07 - View
Populus trichocarpa Potri.005G110600 K18468 - vacuolar protein sorting-associated protein 35 (VPS35) Chr05 + View
Phaseolus vulgaris Phvul.002G106500 K18468 - vacuolar protein sorting-associated protein 35 (VPS35) Chr02 + View
Quercus lobata QL02p012192 CM012294 + View
Quercus lobata QL06p051112 6 - View
Rosa chinensis RcHm_v2.0_Chr2g0098981 RcHm_v2.0_Chr2 + View
Rosa chinensis RcHm_v2.0_Chr6g0303301 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim10G0209100 chr10 + View
Salvia bowleyana SalBow7G0293 GWHASIU00000005 + View
Salvia bowleyana SalBow3G3911 GWHASIU00000006 + View
Salix brachista Sabra05G0187400 GWHAAZH00000005 - View
Salix brachista Sabra02G0015700 GWHAAZH00000002 + View
Salix brachista Sabra05G0090700 GWHAAZH00000005 + View
Simmondsia chinensis Sc03g0003680 GWHAASQ00000003 + View
Simmondsia chinensis Sc02g0008620 GWHAASQ00000002 + View
Sechium edule Sed0026499 LG04 - View
Sapria himalayana SHI08540 scaffold7_18583372 - View
Solanum lycopersicum Solyc03g033400.4 Vacuolar protein sorting-associated protein 35 (AHRD V3.3 *** A0A2G3CKZ4_CAPCH) SL4.0ch03 + View
Solanum lycopersicum Solyc02g083560.3 Vacuolar protein sorting-associated protein 35 (AHRD V3.3 *** A0A2G2XG54_CAPBA) SL4.0ch02 + View
Schrenkiella parvula Sp5g10920 K18468 - vacuolar protein sorting-associated protein 35 (VPS35) ch5-1 + View
Schrenkiella parvula Sp3g31200 K18468 - vacuolar protein sorting-associated protein 35 (VPS35) ch3-6 + View
Solanum pennellii Sopen02g028340 VPS35 homolog B (VPS35B) | CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 35 | BEST Arabidopsis thaliana protein match is: VPS35 homolog A Spenn-ch02 + View
Solanum pennellii Sopen03g006170 VPS35 homolog B (VPS35B) | CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 35 | BEST Arabidopsis thaliana protein match is: VPS35 homolog A Spenn-ch03 + View
Solanum tuberosum PGSC0003DMG400003648 Vacuolar sorting protein ST4.03ch02 + View
Solanum tuberosum PGSC0003DMG400022528 Vacuolar sorting protein ST4.03ch03 + View
Selenicereus undatus Hund16505 Scaffold_33677 - View
Trochodendron aralioides TAR625G0873 group4 + View
Trochodendron aralioides TAR381G1329 group11 + View
Theobroma cacao Thecc.08G047700 VPS35 B Chromosome_8 - View
Theobroma cacao Thecc.01G014300 VPS35 A Chromosome_1 + View
Tarenaya hassleriana THA.LOC104804271 vacuolar protein sorting-associated protein 35A NW_010971389.1 - View
Tarenaya hassleriana THA.LOC104813783 vacuolar protein sorting-associated protein 35B NW_010965373.1 + View
Trifolium pratense TPR.G10523 Tp57577_TGAC_v2_LG3 - View
Tripterygium wilfordii TWI73G0268 NC_052232.1 - View
Tripterygium wilfordii TWI09G1520 NC_052245.1 + View
Tripterygium wilfordii TWI56G0516 NC_052242.1 - View
Vaccinium macrocarpon vmacro22195 Similar to VPS35B: Vacuolar protein sorting-associated protein 35B (Arabidopsis thaliana OX%3D3702) scaffold00312_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G0913 CM024074.1 - View
Vitis vinifera GSVIVG01018728001 chr4 - View
Vitis vinifera GSVIVG01009948001 chr18 - View