Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G6660 LG-1 - View
Acer truncatum Atru.chr3.4063 chr3 + View
Actinidia chinensis Actinidia25138 Lachesis_group20 - View
Avicennia marina MSTRG.12673 ScioBoG_17730_HRSCAF_17811 - View
Aquilegia oxysepala Aqoxy1G00718 CHR01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.N1Z85G K12897 - transformer-2 protein (TRA2) arahy.Tifrunner.gnm1.Arahy.01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.P2CA5S K12897 - transformer-2 protein (TRA2) arahy.Tifrunner.gnm1.Arahy.11 - View
Arabidopsis thaliana AT1G07350 RNA-binding (RRM/RBD/RNP motifs) family protein Encodes a serine/arginine rich-like protein%2C SR45a. Involved in the regulation of stress-responsive alternative splicing. RNA-binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: RNA splicing%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G35785.1)%3B Has 998067 Blast hits to 992400 proteins in 35925 species: Archae - 21556%3B Bacteria - 596698%3B Metazoa - 207042%3B Fungi - 24534%3B Plants - 55970%3B Viruses - 68919%3B Other Eukaryotes - 23348 (source: NCBI BLink). Chr1 - View
Amborella trichopoda ATR0618G030 AmTr_v1.0_scaffold00029 + View
Brassica napus C05p05410 C05 - View
Brassica rapa BraA10t42856Z A10 - View
Beta vulgaris EL10Ac7g16110 PTHR15241//PTHR15241:SF4 - TRANSFORMER-2-RELATED // TRANSFORMER-SR RIBONUCLEOPROTEIN-RELATED Chr7_EL10_PGA_scaffold5 + View
Cannabis sativa CANSAT54G0180 NC_044375.1 + View
Cicer arietinum L. Ca_14898_v3 Ca_LG5_v3 + View
Corylus avellana Haze_24242 Similar to SR45A: Serine/arginine-rich splicing factor SR45a (Arabidopsis thaliana OX%3D3702) 6 + View
Coffea canephora Cc01_g13750 Predicted protein chr1 + View
Citrus clementina Ciclev10028652m.g scaffold_8 + View
Ceratophyllum demersum CDE04G0440 2 + View
Ceratophyllum demersum CDE07G1184 5 - View
Carpinus fangiana Cfa011636 Cfa04 + View
Cardamine hirsuta CARHR007060 Unknown protein Chr1 - View
Carya illinoinensis CiPaw.13G082600 PTHR15241//PTHR15241:SF4 - TRANSFORMER-2-RELATED // TRANSFORMER-SR RIBONUCLEOPROTEIN-RELATED Chr13 - View
Citrullus lanatus ClCG03G000990 RNA binding protein, putative CG_Chr03 + View
Cucumis melo MELO3C020575.2 serine/arginine-rich splicing factor SR45a-like chr12 + View
Chenopodium quinoa AUR62001700 SR45A: Serine/arginine-rich splicing factor SR45a C_Quinoa_Scaffold_2716 - View
Chenopodium quinoa AUR62020082 SR45A: Serine/arginine-rich splicing factor SR45a C_Quinoa_Scaffold_2465 + View
Capsella rubella Carub.0001s0665 PTHR15241//PTHR15241:SF4 - TRANSFORMER-2-RELATED // TRANSFORMER-SR RIBONUCLEOPROTEIN-RELATED scaffold_1 - View
Cucumis sativus L. CsaV3_1G035950 serine/arginine-rich splicing factor SR45a-like chr1 - View
Daucus carota DCAR_007401 hypothetical protein DCARv2_Chr2 - View
Davidia involucrata Dinv14471 GWHABJS00000007 + View
Davidia involucrata Dinv28601 GWHABJS00000010 + View
Durio zibethinus Duzib150G1457 NW_019167882.1 + View
Durio zibethinus Duzib168G2287 NW_019168159.1 + View
Erigeron canadensis ECA247G3397 Conyza_canadensis_scaffold:7 - View
Eucalyptus grandis Eucgr.J01947 Chr10 - View
Fragaria x ananassa FAN11G3835 PTHR15241:SF4 - TRANSFORMER-SR RIBONUCLEOPROTEIN-RELATED Fvb3-4 - View
Fragaria x ananassa FAN21G3912 PTHR15241//PTHR15241:SF4 - TRANSFORMER-2-RELATED // TRANSFORMER-SR RIBONUCLEOPROTEIN-RELATED Fvb3-2 - View
Fragaria x ananassa FAN25G2956 PTHR15241:SF4 - TRANSFORMER-SR RIBONUCLEOPROTEIN-RELATED Fvb3-1 - View
Fragaria x ananassa FAN16G1327 KOG0107//KOG4207 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted splicing factor, SR protein superfamily Fvb3-3 + View
Fragaria vesca FvH4_3g37890 PTHR15241//PTHR15241:SF4 - TRANSFORMER-2-RELATED // TRANSFORMER-SR RIBONUCLEOPROTEIN-RELATED Fvb3 + View
Gossypium hirsutum Gohir.A03G048500 PTHR15241//PTHR15241:SF4 - TRANSFORMER-2-RELATED // TRANSFORMER-SR RIBONUCLEOPROTEIN-RELATED A03 + View
Gossypium hirsutum Gohir.D03G118600 PTHR15241//PTHR15241:SF4 - TRANSFORMER-2-RELATED // TRANSFORMER-SR RIBONUCLEOPROTEIN-RELATED D03 - View
Gossypium hirsutum Gohir.A13G225300 K12897 - transformer-2 protein (TRA2) A13 - View
Glycine max Glyma.18G067300 PTHR15241//PTHR15241:SF4 - TRANSFORMER-2-RELATED // TRANSFORMER-SR RIBONUCLEOPROTEIN-RELATED Gm18 - View
Gossypium raimondii Gorai.003G125000 Chr03 - View
Hydrangea macrophylla Hma1.2p1_0543F.1_g175240 Hma1.2p1_0543F.1 - View
Lupinus albus Lalb_Chr18g0050621 PTHR15241:SF4 - TRANSFORMER-SR RIBONUCLEOPROTEIN-RELATED Lalb_Chr18 + View
Lotus japonicus Lj6g0027218 PTHR15241//PTHR15241:SF4 - TRANSFORMER-2-RELATED // TRANSFORMER-SR RIBONUCLEOPROTEIN-RELATED chr6 - View
Lonicera japonica Lj1A143T42 GWHAAZE00000001 - View
Lactuca sativa Lsat_1_v5_gn_9_25580 Lsat_1_v8_lg_9 + View
Magnolia biondii MBI14_g32941_MAGBIO AED:0.14 Chr14 + View
Malus domestica MD11G1082300 Chr11 - View
Medicago truncatula Medtr3g462330 RNA-binding (RRM/RBD/RNP motif) family protein chr3 + View
Nelumbo nucifera Nn2g13604 chr2 + View
Nelumbo nucifera Nn2g11359 chr2 + View
Nicotiana tabacum Nitab4.5_0000744g0140 Unknown Nitab4.5_0000744 + View
Olea europaea Oeu035012.2 chr13 + View
Olea europaea Oeu045513.2 chr20 - View
Oryza sativa ssp. japonica Os03g0265600 Similar to Transformer-2-like protein. chr03 - View
Petunia axillaris Peaxi162Scf01058g00156 RNA-binding (RRM/RBD/RNP motifs) family protein Peaxi162Scf01058 - View
Punica granatum PGR119G0392 NC_045132.1 + View
Prunus persica Prupe.6G062700 Pp06 - View
Pisum sativum Psat5g162440 RNA recognition motif. (a.k.a. RRM + RBD + or RNP domain) chr5LG3 - View
Papaver somniferum PSO339G6126 NC_039366.1 - View
Papaver somniferum PSO384G4580 NC_039368.1 - View
Populus trichocarpa Potri.009G041700 KOG0149//KOG4207 - Predicted RNA-binding protein SEB4 (RRM superfamily) // Predicted splicing factor, SR protein superfamily Chr09 + View
Populus trichocarpa Potri.001G248100 PTHR15241//PTHR15241:SF4 - TRANSFORMER-2-RELATED // TRANSFORMER-SR RIBONUCLEOPROTEIN-RELATED Chr01 + View
Phaseolus vulgaris Phvul.006G064000 PTHR15241:SF4 - TRANSFORMER-SR RIBONUCLEOPROTEIN-RELATED Chr06 + View
Quercus lobata QL01p027260 1 - View
Rosa chinensis RcHm_v2.0_Chr5g0068121 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim13G0073700 chr13 - View
Salix brachista Sabra16G0150600 GWHAAZH00000016 + View
Simmondsia chinensis Sc21g0006160 GWHAASQ00000021 + View
Solanum lycopersicum Solyc06g076670.3 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *-* A0A1P8AVT0_ARATH) SL4.0ch06 + View
Schrenkiella parvula Sp1g06100 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) ch1-1 - View
Solanum pennellii Sopen06g033060 RNA-binding (RRM/RBD/RNP motifs) family protein | FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding | INVOLVED IN: RNA splicing | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein Spenn-ch06 + View
Solanum tuberosum PGSC0003DMG400030345 FUS-interacting serine-arginine-rich protein 1 ST4.03ch06 + View
Trochodendron aralioides TAR636G0776 group1 - View
Trochodendron aralioides TAR623G1169 group7 + View
Theobroma cacao Thecc.09G307200 RNA-binding family protein Chromosome_9 - View
Tarenaya hassleriana THA.LOC104800717 serine/arginine-rich splicing factor SR45a isoform X1 NW_010969548.1 + View
Trifolium pratense TPR.G30107 Tp57577_TGAC_v2_scaf_485 - View
Tripterygium wilfordii TWI79G1245 NC_052238.1 - View
Vaccinium macrocarpon vmacro02997 Similar to SR45A: Serine/arginine-rich splicing factor SR45a (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0540G0786 CM024075.1 - View
Vitis vinifera GSVIVG01024805001 chr6 + View