Gene: Sopen06g033060
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen06g033060
- Transcript Identifier Sopen06g033060.3
- Gene Type Coding gene
- Location Spenn-ch06 : 58603539-58605484 : positive
Gene Family Information
- ID HOM05D001869
- #Genes/#Species 352/96
- Phylogenetic origin
- ID ORTHO05D002013
- #Genes/#Species 326/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen06g033060.3
Descriptions
- Description RNA-binding (RRM/RBD/RNP motifs) family protein | FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding | INVOLVED IN: RNA splicing | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043484 | ISO | PLAZA Integrative Orthology | regulation of RNA splicing | AT1G07350 |
| GO:0009644 | ISO | PLAZA Integrative Orthology | response to high light intensity | AT1G07350 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G07350 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |