Gene: Solyc06g076670.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc06g076670.3
  • Transcript Identifier Solyc06g076670.3.1
  • Gene Type Coding gene
  • Location SL4.0ch06 : 45293395-45295332 : positive

Gene Family Information

  • ID HOM05D001869
  • #Genes/#Species 352/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc06g076670.3.1
  • uniprot A0A3Q7H414
  • gene_id Solyc06g076670

Descriptions

  • Description RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *-* A0A1P8AVT0_ARATH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043484
ISO
PLAZA Integrative Orthologyregulation of RNA splicing AT1G07350
GO:0009644
ISO
PLAZA Integrative Orthologyresponse to high light intensity AT1G07350

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G07350

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
IPR000504 RNA recognition motif domain
Mapman id Description
35.1 not assigned.annotated