Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr6.1792 chr6 + View
Actinidia chinensis Actinidia10875 Lachesis_group14 + View
Actinidia chinensis Actinidia25934 Lachesis_group22 + View
Actinidia chinensis Actinidia31479 Lachesis_group20 - View
Arabidopsis lyrata AL8G11270 scaffold_8 - View
Amaranthus hybridus Ah.07g199630 AmaHy_arrow1_Scaffold_7 + View
Aquilegia oxysepala Aqoxy3G02619 CHR03 + View
Brassica carinata BcaB07g30801 ChrB07 - View
Brassica carinata BcaC04g21663 ChrC04 - View
Brassica napus A09p22740 A09 + View
Brassica napus C09p29210 C09 + View
Brassica napus C02p48200 C02 + View
Brassica oleracea BolC9t55781H C9 + View
Brassica rapa BraA09t37877Z A09 + View
Beta vulgaris EL10Ac5g12207 K14326 - regulator of nonsense transcripts 1 (UPF1, RENT1) Chr5_EL10_PGA_scaffold2 + View
Capsicum annuum CAN.G845.27 PGAv.1.6.scaffold845 - View
Capsicum annuum CAN.G572.54 PGAv.1.6.scaffold572 + View
Corylus avellana Haze_08316 Similar to UPF1: Regulator of nonsense transcripts 1 homolog (Arabidopsis thaliana OX%3D3702) 4 + View
Coffea canephora Cc08_g01700 Regulator of nonsense transcripts 1 homolog chr8 - View
Carpinus fangiana Cfa012367 Cfa05 - View
Cardamine hirsuta CARHR174460 Regulator of nonsense transcripts-like protein Chr6 - View
Carya illinoinensis CiPaw.11G086500 K14326 - regulator of nonsense transcripts 1 (UPF1, RENT1) Chr11 - View
Carya illinoinensis CiPaw.12G059100 K14326 - regulator of nonsense transcripts 1 (UPF1, RENT1) Chr12 - View
Citrullus lanatus ClCG10G001940 Regulator of nonsense transcripts-like protein CG_Chr10 + View
Cucumis melo MELO3C013879.2 Regulator of nonsense transcripts 1-like protein chr06 + View
Chenopodium quinoa AUR62018790 UPF1: Regulator of nonsense transcripts 1 homolog C_Quinoa_Scaffold_1817 + View
Chenopodium quinoa AUR62007211 UPF1: Regulator of nonsense transcripts 1 homolog C_Quinoa_Scaffold_1971 - View
Cucumis sativus L. CsaV3_3G002080 regulator of nonsense transcripts 1 homolog chr3 + View
Daucus carota DCAR_008304 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv25173 GWHABJS00000017 - View
Davidia involucrata Dinv28904 GWHABJS00000003 - View
Durio zibethinus Duzib205G1433 NW_019168381.1 + View
Erigeron canadensis ECA233G4074 Conyza_canadensis_scaffold:1 - View
Eucalyptus grandis Eucgr.E00323 Chr05 + View
Fragaria x ananassa FAN04G1896 K14326 - regulator of nonsense transcripts 1 (UPF1, RENT1) Fvb5-4 - View
Fragaria x ananassa FAN08G2510 K14326 - regulator of nonsense transcripts 1 (UPF1, RENT1) Fvb5-3 - View
Fragaria vesca FvH4_5g20920 K14326 - regulator of nonsense transcripts 1 (UPF1, RENT1) Fvb5 - View
Gossypium hirsutum Gohir.A09G197800 PF09416//PF13086//PF13087 - RNA helicase (UPF2 interacting domain) (UPF1_Zn_bind) // AAA domain (AAA_11) // AAA domain (AAA_12) A09 - View
Gossypium hirsutum Gohir.D03G169400 K14326 - regulator of nonsense transcripts 1 (UPF1, RENT1) D03 - View
Gossypium hirsutum Gohir.A08G160500 K14326 - regulator of nonsense transcripts 1 (UPF1, RENT1) A08 + View
Gossypium hirsutum Gohir.A03G003000 K14326 - regulator of nonsense transcripts 1 (UPF1, RENT1) A03 + View
Gossypium hirsutum Gohir.D09G192400 K14326 - regulator of nonsense transcripts 1 (UPF1, RENT1) D09 - View
Gossypium hirsutum Gohir.D08G180800 K14326 - regulator of nonsense transcripts 1 (UPF1, RENT1) D08 + View
Glycine max Glyma.01G202600 K14326 - regulator of nonsense transcripts 1 (UPF1, RENT1) Gm01 + View
Gossypium raimondii Gorai.004G189700 Chr04 + View
Gossypium raimondii Gorai.006G215300 Chr06 - View
Hydrangea macrophylla Hma1.2p1_0414F.1_g147610 Hma1.2p1_0414F.1 - View
Lupinus albus Lalb_Chr16g0379271 K14326 - regulator of nonsense transcripts 1 (UPF1, RENT1) Lalb_Chr16 + View
Lonicera japonica Lj8C288T9 GWHAAZE00000008 - View
Lonicera japonica Lj2C248G9 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_6_89421 K14326 - regulator of nonsense transcripts 1 (UPF1, RENT1) Lsat_1_v8_lg_6 + View
Lactuca sativa Lsat_1_v5_gn_6_68181 K14326 - regulator of nonsense transcripts 1 (UPF1, RENT1) Lsat_1_v8_lg_6 - View
Magnolia biondii MBI04_g03344_MAGBIO AED:0.08 Chr04 + View
Malus domestica MD06G1042600 RNA helicase Chr06 + View
Malus domestica MD16G1268400 RNA helicase Chr16 + View
Medicago truncatula Medtr5g013820 regulator of nonsense transcripts protein chr5 - View
Nelumbo nucifera Nn6g33690 chr6 + View
Petunia axillaris Peaxi162Scf00084g00613 Regulator of nonsense transcripts 1 homolog Peaxi162Scf00084 - View
Petunia axillaris Peaxi162Scf00102g00730 Regulator of nonsense transcripts 1 homolog Peaxi162Scf00102 + View
Punica granatum PGR031G3985 NC_045127.1 - View
Pisum sativum Psat2g175000 RNA helicase (UPF2 interacting domain) chr2LG1 + View
Papaver somniferum PSO782G3028 NC_039365.1 + View
Populus trichocarpa Potri.003G086400 K14326 - regulator of nonsense transcripts 1 (UPF1, RENT1) Chr03 - View
Populus trichocarpa Potri.001G148100 K14326 - regulator of nonsense transcripts 1 (UPF1, RENT1) Chr01 + View
Phaseolus vulgaris Phvul.002G003300 K14326 - regulator of nonsense transcripts 1 (UPF1, RENT1) Chr02 - View
Quercus lobata QL12p007494 12 + View
Rosa chinensis RcHm_v2.0_Chr3g0481211 RcHm_v2.0_Chr3 + View
Rhododendron simsii Rhsim07G0121100 chr07 - View
Rhododendron simsii Rhsim11G0009100 chr11 - View
Salix brachista Sabra03G0056200 GWHAAZH00000003 - View
Salix brachista Sabra01G0116400 GWHAAZH00000001 + View
Simmondsia chinensis Sc01g0007820 GWHAASQ00000001 - View
Sechium edule Sed0018558 LG07 - View
Solanum lycopersicum Solyc08g077420.3 Regulator of nonsense transcripts 1-like protein (AHRD V3.3 *** A0A2G3AF80_CAPAN) SL4.0ch08 + View
Solanum pennellii Sopen08g026010 Required for nonsense-mediated mRNA decay. Involved in RNA interference. lba1 mutants has reduced sugar-induced expression of Atb- amylase, is hypersensitive to glucose and abscisic acid and resistant to mannose, and shows early flowering, short day-sensitive growth, and seed germination phenotypes. | LOW-LEVEL BETA-AMYLASE 1 (LBA1) | FUNCTIONS IN: in 6 functions | INVOLVED IN: sugar mediated signaling pathway, RNA interference, nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, response to sucrose stimulus | LOCATED IN: plasma membrane | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit , Helicase, superfamily 1/2, ATP-binding domain , RNA helicase UPF1, UPF2-interacting domain | BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative Spenn-ch08 + View
Solanum tuberosum PGSC0003DMG400001863 Nonsense-mediated mRNA decay protein ST4.03ch08 + View
Selenicereus undatus Hund11293 Scaffold_10417 + View
Trochodendron aralioides TAR375G0650 group15 + View
Theobroma cacao Thecc.03G235600 Regulator of nonsense transcripts 1 Chromosome_3 + View
Tripterygium wilfordii TWI15G0852 NC_052247.1 - View
Vaccinium macrocarpon vmacro14146 Similar to UPF1: Regulator of nonsense transcripts 1 homolog (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro00364 Similar to UPF1: Regulator of nonsense transcripts 1 homolog (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G0424 CM024074.1 - View