Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0032431 PREDICTED: uncharacterized protein LOC100267498 isoform X1 [Vitis vinifera] Chr11 - View
CSS0046081 PREDICTED: uncharacterized protein LOC104222108 isoform X3 [Nicotiana sylvestris] Chr3 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G15830 LG-5 - View
Acer truncatum Atru.chr2.75 chr2 + View
Actinidia chinensis Actinidia19777 Lachesis_group7 - View
Actinidia chinensis Actinidia21498 Lachesis_group16 + View
Actinidia chinensis Actinidia21053 Lachesis_group9 + View
Actinidia chinensis Actinidia24344 Lachesis_group24 + View
Actinidia chinensis Actinidia35557 Lachesis_group2 - View
Actinidia chinensis Actinidia32221 Lachesis_group19 + View
Arabidopsis lyrata AL3G16160 scaffold_3 + View
Avicennia marina MSTRG.27977 ScioBoG_94932_HRSCAF_95134 - View
Aquilegia oxysepala Aqoxy2G02961 CHR02 - View
Aquilegia oxysepala Aqoxy5G00748 CHR05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.9XGC9Z PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.AWF533 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.XS7LB4 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.19 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.5G7CV2 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.09 - View
Arabidopsis thaliana AT3G05545 RING/U-box superfamily protein RING/U-box superfamily protein%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%2C Zinc finger%2C PHD-type (InterPro:IPR001965)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G47700.1)%3B Has 1560 Blast hits to 1269 proteins in 195 species: Archae - 0%3B Bacteria - 91%3B Metazoa - 627%3B Fungi - 277%3B Plants - 288%3B Viruses - 4%3B Other Eukaryotes - 273 (source: NCBI BLink). Chr3 + View
Amborella trichopoda ATR0796G022 AmTr_v1.0_scaffold00045 + View
Brassica carinata BcaC09g47839 ChrC09 - View
Brassica carinata BcaC05g30112 ChrC05 - View
Brassica carinata BcaB04g21442 ChrB04 + View
Brassica carinata BcaB04g19258 ChrB04 - View
Brassica napus A03p34190 A03 + View
Brassica napus C03p41580 C03 + View
Brassica oleracea BolC3t16439H C3 + View
Brassica oleracea BolC5t34826H C5 - View
Brassica oleracea BolC1t05690H C1 - View
Brassica rapa BraA03t12593Z A03 + View
Brassica rapa BraA01t04476Z A01 + View
Beta vulgaris EL10Ac4g09908 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Chr4_EL10_PGA_scaffold1 - View
Cicer arietinum L. Ca_10133_v3 Ca_LG4_v3 + View
Cicer arietinum L. Ca_05796_v3 Ca_LG2_v3 - View
Corylus avellana Haze_04134 Similar to RFI2: E3 ubiquitin-protein ligase RFI2 (Arabidopsis thaliana OX%3D3702) 2 - View
Corylus avellana Haze_01189 Protein of unknown function 1 - View
Coffea canephora Cc02_g34200 Putative RING/U-box superfamily protein chr2 + View
Citrus clementina Ciclev10006312m.g scaffold_9 - View
Citrus clementina Ciclev10001227m.g scaffold_5 + View
Carpinus fangiana Cfa005924 Cfa02 - View
Carpinus fangiana Cfa006634 Cfa02 + View
Cardamine hirsuta CARHR079940 RING/U-box superfamily protein Chr3 + View
Carya illinoinensis CiPaw.08G161600 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Chr08 - View
Carya illinoinensis CiPaw.07G107800 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Chr07 + View
Carya illinoinensis CiPaw.07G022200 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Chr07 - View
Citrullus lanatus ClCG03G017310 RING/U-box superfamily protein LENGTH=425 CG_Chr03 + View
Corchorus olitorius COL.COLO4_10527 Sterol-regulatory element binding proteins intramembrane protease AWUE01014526.1 + View
Carica papaya Cpa.g.sc9.229 supercontig_9 + View
Carica papaya Cpa.g.sc327.4 supercontig_327 + View
Chenopodium quinoa AUR62000756 Protein of unknown function C_Quinoa_Scaffold_2088 - View
Chenopodium quinoa AUR62005212 Protein of unknown function C_Quinoa_Scaffold_3820 + View
Capsella rubella Carub.0003s0484 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED scaffold_3 + View
Daucus carota DCAR_003361 hypothetical protein DCARv2_Chr1 + View
Daucus carota DCAR_002825 hypothetical protein DCARv2_Chr1 + View
Daucus carota DCAR_022143 hypothetical protein DCARv2_Chr6 + View
Davidia involucrata Dinv33049 GWHABJS00000010 + View
Davidia involucrata Dinv44371 GWHABJS00000014 + View
Davidia involucrata Dinv30819 GWHABJS00000002 + View
Davidia involucrata Dinv40334 GWHABJS00000005 + View
Durio zibethinus Duzib128G0926 NW_019168481.1 - View
Durio zibethinus Duzib133G0338 NW_019167938.1 - View
Durio zibethinus Duzib138G0033 NW_019167893.1 - View
Durio zibethinus Duzib211G0185 NW_019168049.1 - View
Durio zibethinus Duzib177G1061 NW_019168004.1 + View
Erigeron canadensis ECA236G3557 Conyza_canadensis_scaffold:3 - View
Erigeron canadensis ECA236G0210 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.B01912 Chr02 - View
Erythranthe guttata Migut.N02088 scaffold_14 + View
Eutrema salsugineum Thhalv10020788m.g PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED scaffold_13 - View
Fragaria x ananassa FAN09G2669 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Fvb6-2 - View
Fragaria x ananassa FAN02G3011 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Fvb6-4 + View
Fragaria x ananassa FAN14G1734 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Fvb6-1 - View
Fragaria x ananassa FAN05G1277 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Fvb6-3 - View
Fragaria vesca FvH4_6g06620 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Fvb6 + View
Gossypium hirsutum Gohir.D11G278200 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED D11 + View
Gossypium hirsutum Gohir.A13G109800 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED A13 + View
Gossypium hirsutum Gohir.D13G112400 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED D13 + View
Gossypium hirsutum Gohir.A11G268300 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED A11 + View
Glycine max Glyma.20G236700 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Gm20 + View
Glycine max Glyma.03G235100 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Gm03 - View
Glycine max Glyma.10G151500 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Gm10 - View
Glycine max Glyma.19G232800 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Gm19 - View
Gossypium raimondii Gorai.007G300400 Chr07 + View
Gossypium raimondii Gorai.013G205600 Chr13 + View
Gossypium raimondii Gorai.013G126200 Chr13 + View
Lupinus albus Lalb_Chr18g0045791 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr18 + View
Lupinus albus Lalb_Chr02g0148101 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr02 - View
Lupinus albus Lalb_Chr15g0077401 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr15 + View
Lupinus albus Lalb_Chr21g0310571 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr21 - View
Lupinus albus Lalb_Chr06g0167721 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr06 + View
Lotus japonicus Lj1g0010414 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED chr1 + View
Lotus japonicus Lj5g0002371 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED chr5 - View
Lonicera japonica Lj5A389T59 GWHAAZE00000005 - View
Lonicera japonica Lj1A26T29 GWHAAZE00000001 - View
Lonicera japonica Lj9C146G5 GWHAAZE00000009 + View
Lactuca sativa Lsat_1_v5_gn_7_72040 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Lsat_1_v8_lg_7 + View
Magnolia biondii MBI19_g13195_MAGBIO AED:0.12 Chr19 - View
Malus domestica MD12G1212400 RING/U-box superfamily protein Chr12 - View
Malus domestica MD16G1167800 RING/U-box superfamily protein Chr16 + View
Malus domestica MD13G1167400 RING/U-box superfamily protein Chr13 - View
Malus domestica MD04G1199600 RING/U-box superfamily protein Chr04 - View
Manihot esculenta Manes.08G117000 Chromosome08 - View
Manihot esculenta Manes.03G196300 Chromosome03 + View
Manihot esculenta Manes.09G170900 Chromosome09 + View
Medicago truncatula Medtr1g083390 DNA-binding protein, putative chr1 + View
Medicago truncatula Medtr7g112740 DNA-binding protein, putative chr7 + View
Nelumbo nucifera Nn3g21468 chr3 + View
Nelumbo nucifera Nn4g25807 chr4 - View
Olea europaea Oeu010920.1 chr15 + View
Olea europaea Oeu043342.1 chr3 + View
Petunia axillaris Peaxi162Scf00071g00544 RING/U-box superfamily protein Peaxi162Scf00071 - View
Petunia axillaris Peaxi162Scf00037g01221 RING/U-box superfamily protein Peaxi162Scf00037 + View
Punica granatum PGR004G2206 NC_045131.1 - View
Punica granatum PGR031G0021 NC_045127.1 - View
Punica granatum PGR083G1363 NC_045133.1 - View
Prunus persica Prupe.6G320100 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Pp06 - View
Papaver somniferum PSO210G5200 NC_039359.1 + View
Papaver somniferum PSO832G2288 NC_039367.1 - View
Populus trichocarpa Potri.013G015600 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Chr13 - View
Populus trichocarpa Potri.005G024700 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Chr05 - View
Phaseolus vulgaris Phvul.006G089200 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Chr06 - View
Phaseolus vulgaris Phvul.007G197300 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Chr07 + View
Quercus lobata QL03p020135 3 - View
Quercus lobata QL06p009106 6 + View
Rosa chinensis RcHm_v2.0_Chr3g0455821 RcHm_v2.0_Chr3 + View
Rhododendron simsii Rhsim01G0284400 chr01 + View
Rhododendron simsii Rhsim05G0138600 chr05 - View
Rhododendron simsii Rhsim13G0010900 chr13 - View
Striga asiatica SGA_v2.0_scaffold81G26096 scaffold81 + View
Salix brachista Sabra13G0013700 GWHAAZH00000013 - View
Salix brachista Sabra13G0017800 GWHAAZH00000013 - View
Salix brachista Sabra05G0030100 GWHAAZH00000005 - View
Simmondsia chinensis Sc16g0008800 GWHAASQ00000016 - View
Solanum lycopersicum Solyc01g099790.3 RING/U-box superfamily protein (AHRD V3.3 *-* A0A0U9HU46_KLENI) SL4.0ch01 + View
Schrenkiella parvula Sp3g04390 PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED ch3-1 + View
Solanum pennellii Sopen01g043310 RING/U-box superfamily protein | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type , Zinc finger, PHD-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG400024717 DNA binding protein ST4.03ch01 + View
Selenicereus undatus Hund21714 Scaffold_33680 + View
Selenicereus undatus Hund07102 Scaffold_33676 + View
Trochodendron aralioides TAR636G1732 group1 - View
Trochodendron aralioides TAR362G0861 group17 - View
Trochodendron aralioides TAR633G2461 group2 + View
Trochodendron aralioides TAR365G1043 group16 - View
Theobroma cacao Thecc.05G313600 RING/U-box superfamily protein Chromosome_5 + View
Theobroma cacao Thecc.01G299000 DNA binding protein Chromosome_1 + View
Theobroma cacao Thecc.04G285900 Uncharacterized protein Chromosome_4 + View
Tarenaya hassleriana THA.LOC104802795 uncharacterized protein LOC104802795 NW_010970490.1 - View
Tarenaya hassleriana THA.LOC104805890 uncharacterized protein LOC104805890 NW_010961290.1 + View
Tarenaya hassleriana THA.LOC104818723 uncharacterized protein LOC104818723 NW_010966177.1 + View
Tarenaya hassleriana THA.LOC104821725 uncharacterized protein LOC104821725 isoform X1 NW_010966542.1 + View
Trifolium pratense TPR.G33183 Tp57577_TGAC_v2_LG6 - View
Tripterygium wilfordii TWI56G0125 NC_052242.1 - View
Tripterygium wilfordii TWI36G1062 NC_052237.1 - View
Utricularia gibba unitig_0.g2317 unitig_0 + View
Vaccinium macrocarpon vmacro19742 Protein of unknown function chr5_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro02456 Similar to RFI2: E3 ubiquitin-protein ligase RFI2 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0540G0393 CM024075.1 + View
Vitis vinifera GSVIVG01031134001 chr14 + View