Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0009472 PREDICTED: COBRA-like protein 4 [Vitis vinifera] Chr2 + View
CSS0034060 PREDICTED: protein COBRA-like [Sesamum indicum] Chr2 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G3820 LG-2 - View
Aethionema arabicum Aa31LG5G12740 LG-5 - View
Aethionema arabicum Aa31LG11G13960 LG-11 - View
Acer truncatum Atru.chr8.529 chr8 + View
Actinidia chinensis Actinidia17597 Lachesis_group21 + View
Actinidia chinensis Actinidia18071 Lachesis_group11 + View
Actinidia chinensis Actinidia04808 Lachesis_group1 - View
Actinidia chinensis Actinidia36263 Lachesis_group4 + View
Actinidia chinensis Actinidia26261 Lachesis_group3 + View
Arabidopsis lyrata AL3G11460 scaffold_3 - View
Avicennia marina MSTRG.15439 ScioBoG_19538_HRSCAF_19626 + View
Avicennia marina MSTRG.3369 ScioBoG_102836_HRSCAF_103072 + View
Avicennia marina MSTRG.23865 ScioBoG_3895_HRSCAF_3912 - View
Avicennia marina MSTRG.2981 ScioBoG_102835_HRSCAF_103059 + View
Aquilegia oxysepala Aqoxy3G00511 CHR03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.HB635G PF04833 - COBRA-like protein (COBRA) arahy.Tifrunner.gnm1.Arahy.14 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.XMS8ZM PF04833 - COBRA-like protein (COBRA) arahy.Tifrunner.gnm1.Arahy.01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.FK15VW PF04833 - COBRA-like protein (COBRA) arahy.Tifrunner.gnm1.Arahy.20 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.B798EQ PF04833 - COBRA-like protein (COBRA) arahy.Tifrunner.gnm1.Arahy.04 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.LA1S8R PF04833 - COBRA-like protein (COBRA) arahy.Tifrunner.gnm1.Arahy.10 + View
Arabidopsis thaliana AT3G29810 COBRA-like protein 2 precursor COBRA-like protein 2 precursor (COBL2)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: anchored to plasma membrane%2C anchored to membrane%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored%2C plant (InterPro:IPR006918)%2C COBRA-like (InterPro:IPR017391)%3B BEST Arabidopsis thaliana protein match is: COBRA-like protein 1 precursor (TAIR:AT3G02210.1)%3B Has 381 Blast hits to 370 proteins in 30 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 381%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT5G15630 COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family Encodes a member of the COBRA family%2C similar to phytochelatin synthetase. Involved in secondary cell wall biosynthesis. Mutants make smaller plants with reduced levels of cellulose and cell wall sugars. IRREGULAR XYLEM 6 (IRX6)%3B INVOLVED IN: secondary cell wall biogenesis%3B LOCATED IN: plasma membrane%2C anchored to membrane%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored%2C plant (InterPro:IPR006918)%2C COBRA-like (InterPro:IPR017391)%3B BEST Arabidopsis thaliana protein match is: COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family (TAIR:AT5G60920.1)%3B Has 379 Blast hits to 368 proteins in 30 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 379%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr5 + View
Amborella trichopoda ATR0827G036 AmTr_v1.0_scaffold00047 + View
Brassica carinata BcaB01g05036 ChrB01 - View
Brassica carinata BcaC03g17601 ChrC03 + View
Brassica carinata BcaC05g30333 ChrC05 - View
Brassica carinata BcaC06g30855 ChrC06 - View
Brassica napus A02p36870 A02 + View
Brassica napus A02p03130 A02 + View
Brassica napus C09p61480 C09 - View
Brassica napus C02p07850 C02 + View
Brassica napus A05p45090 A05 - View
Brassica napus A06p39810 A06 - View
Brassica napus C02p55920 C02 + View
Brassica oleracea BolC2t11650H C2 + View
Brassica oleracea BolC5t35099H C5 + View
Brassica rapa BraA06t26896Z A06 - View
Brassica rapa BraA05t23152Z A05 + View
Brassica rapa BraA02t08679Z A02 + View
Beta vulgaris EL10Ac2g04452 PTHR31673//PTHR31673:SF2 - FAMILY NOT NAMED // COBRA-LIKE PROTEIN 4 Chr2_EL10_PGA_scaffold6 + View
Capsicum annuum CAN.G497.83 PGAv.1.6.scaffold497 + View
Cannabis sativa CANSAT64G0169 NC_044379.1 + View
Corylus avellana Haze_14395 Similar to BC1LP1: COBRA-like protein 7 (Oryza sativa subsp. japonica OX%3D39947) 5 + View
Citrus clementina Ciclev10021527m.g scaffold_3 + View
Carpinus fangiana Cfa007681 Cfa03 + View
Cardamine hirsuta CARHR076180 Protein COBRA, putative Chr3 - View
Cardamine hirsuta CARHR153200 Protein COBRA, putative Chr5 + View
Cardamine hirsuta CARHR197690 COBRA-like protein Chr6 - View
Carya illinoinensis CiPaw.03G084500 PTHR31673//PTHR31673:SF2 - FAMILY NOT NAMED // COBRA-LIKE PROTEIN 4 Chr03 + View
Citrullus lanatus ClCG07G015950 COBRA-like protein CG_Chr07 + View
Citrullus lanatus ClCG06G015510 COBRA-like protein CG_Chr06 + View
Cucumis melo MELO3C002046.2 COBRA-like protein 4 chr12 + View
Cucumis melo MELO3C017243.2 COBRA-like protein 4 chr02 + View
Cucumis melo MELO3C026307.2 protein COBRA-like chr07 + View
Carica papaya Cpa.g.sc14.204 supercontig_14 + View
Chenopodium quinoa AUR62023171 COBL4: COBRA-like protein 4 C_Quinoa_Scaffold_1189 + View
Chenopodium quinoa AUR62009493 Protein of unknown function C_Quinoa_Scaffold_3674 + View
Capsella rubella Carub.0006s1378 PTHR31673//PTHR31673:SF2 - FAMILY NOT NAMED // COBRA-LIKE PROTEIN 4 scaffold_6 + View
Capsella rubella Carub.0003s0133 PF04833 - COBRA-like protein (COBRA) scaffold_3 - View
Capsella rubella Carub.0005s0835 PF04833 - COBRA-like protein (COBRA) scaffold_5 + View
Cucumis sativus L. CsaV3_1G006180 COBRA-like protein chr1 - View
Cucumis sativus L. CsaV3_4G010170 COBRA-like protein chr4 + View
Daucus carota DCAR_025446 hypothetical protein DCARv2_Chr7 + View
Davidia involucrata Dinv33853 GWHABJS00000014 + View
Davidia involucrata Dinv34917 GWHABJS00000012 + View
Durio zibethinus Duzib138G1682 NW_019167893.1 + View
Durio zibethinus Duzib211G0487 NW_019168049.1 + View
Erigeron canadensis ECA232G2665 Conyza_canadensis_scaffold:2 + View
Erigeron canadensis ECA238G1822 Conyza_canadensis_scaffold:6 - View
Eucalyptus grandis Eucgr.J01392 Chr10 + View
Erythranthe guttata Migut.H00599 scaffold_8 + View
Eutrema salsugineum Thhalv10004232m.g PF04833 - COBRA-like protein (COBRA) scaffold_6 - View
Eutrema salsugineum Thhalv10020716m.g PF04833 - COBRA-like protein (COBRA) scaffold_13 + View
Eutrema salsugineum Thhalv10013604m.g PTHR31673:SF2 - COBRA-LIKE PROTEIN 4 scaffold_2 + View
Fragaria x ananassa FAN02G0367 PF04833 - COBRA-like protein (COBRA) Fvb6-4 - View
Fragaria x ananassa FAN09G3481 PF04833 - COBRA-like protein (COBRA) Fvb6-2 + View
Fragaria x ananassa FAN14G0201 PF04833 - COBRA-like protein (COBRA) Fvb6-1 + View
Fragaria x ananassa FAN05G3812 PF04833 - COBRA-like protein (COBRA) Fvb6-3 + View
Fragaria x ananassa FAN18G0024 PTHR31673:SF2 - COBRA-LIKE PROTEIN 4 Fvb5-1 + View
Fragaria vesca FvH4_6g46460 PF04833 - COBRA-like protein (COBRA) Fvb6 + View
Fragaria vesca FvH4_5g13531 PF04833 - COBRA-like protein (COBRA) Fvb5 + View
Gossypium hirsutum Gohir.A07G180900 PTHR31673:SF3 - COBRA-LIKE EXTRACELLULAR GLYCOSYL-PHOSPHATIDYL INOSITOL-ANCHORED FAMILY PROTEIN-RELATED A07 - View
Gossypium hirsutum Gohir.D11G165400 PF04833 - COBRA-like protein (COBRA) D11 + View
Gossypium hirsutum Gohir.A11G159360 PF04833 - COBRA-like protein (COBRA) A11 + View
Glycine max Glyma.08G249700 PF04833 - COBRA-like protein (COBRA) Gm08 + View
Glycine max Glyma.19G033500 PF04833 - COBRA-like protein (COBRA) Gm19 + View
Glycine max Glyma.13G053200 PTHR31673//PTHR31673:SF2 - FAMILY NOT NAMED // COBRA-LIKE PROTEIN 4 Gm13 + View
Glycine max Glyma.18G271900 PTHR31673:SF3 - COBRA-LIKE EXTRACELLULAR GLYCOSYL-PHOSPHATIDYL INOSITOL-ANCHORED FAMILY PROTEIN-RELATED Gm18 + View
Glycine max Glyma.04G160000 PF04833 - COBRA-like protein (COBRA) Gm04 + View
Gossypium raimondii Gorai.007G176300 Chr07 + View
Hydrangea macrophylla Hma1.2p1_2026F.1_g311570 Hma1.2p1_2026F.1 + View
Lupinus albus Lalb_Chr21g0318181 PF04833 - COBRA-like protein (COBRA) Lalb_Chr21 + View
Lupinus albus Lalb_Chr02g0158691 PF04833 - COBRA-like protein (COBRA) Lalb_Chr02 + View
Lupinus albus Lalb_Chr10g0092781 PTHR31673//PTHR31673:SF3 - FAMILY NOT NAMED // COBRA-LIKE EXTRACELLULAR GLYCOSYL-PHOSPHATIDYL INOSITOL-ANCHORED FAMILY PROTEIN-RELATED Lalb_Chr10 - View
Lupinus albus Lalb_Chr17g0336841 PTHR31673//PTHR31673:SF2 - FAMILY NOT NAMED // COBRA-LIKE PROTEIN 4 Lalb_Chr17 + View
Lotus japonicus Lj1g0011062 PTHR31673:SF2 - COBRA-LIKE PROTEIN 4 chr1 + View
Lonicera japonica Lj5A135T37 GWHAAZE00000005 - View
Lonicera japonica Lj4A121G74 GWHAAZE00000004 + View
Lactuca sativa Lsat_1_v5_gn_2_89561 Lsat_1_v8_lg_2 - View
Lactuca sativa Lsat_1_v5_gn_1_14620 Lsat_1_v8_lg_1 - View
Lactuca sativa Lsat_1_v5_gn_4_173220 PF04833 - COBRA-like protein (COBRA) Lsat_1_v8_lg_4 + View
Magnolia biondii MBI16_g03091_MAGBIO AED:0.07 Chr16 + View
Malus domestica MD17G1064200 COBRA-like protein 1 precursor Chr17 + View
Malus domestica MD09G1072800 COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family Chr09 + View
Manihot esculenta Manes.14G087750 Chromosome14 + View
Manihot esculenta Manes.06G082300 Chromosome06 + View
Manihot esculenta Manes.02G058100 Chromosome02 + View
Medicago truncatula Medtr6g015865 COBRA-like protein 2 precursor chr6 - View
Nelumbo nucifera Nn4g23485 chr4 + View
Olea europaea Oeu007075.1 scaffold126 + View
Olea europaea Oeu004421.1 chr7 - View
Oryza sativa ssp. japonica Os03g0754500 Similar to COBRA-like protein 3. chr03 - View
Petunia axillaris Peaxi162Scf00166g00335 COBRA-like protein 4 Peaxi162Scf00166 + View
Punica granatum PGR042G1836 NC_045130.1 + View
Punica granatum PGR083G0818 NC_045133.1 + View
Prunus persica Prupe.5G207800 PF04833 - COBRA-like protein (COBRA) Pp05 + View
Prunus persica Prupe.3G250300 PTHR31673:SF2 - COBRA-LIKE PROTEIN 4 Pp03 + View
Pisum sativum Psat1g065960 COBRA-like protein chr1LG6 - View
Pisum sativum Psat3g204320 COBRA-like protein chr3LG5 + View
Papaver somniferum PSO017G2673 NC_039362.1 + View
Papaver somniferum PSO478G3838 NC_039361.1 + View
Populus trichocarpa Potri.017G098600 PTHR31673:SF3 - COBRA-LIKE EXTRACELLULAR GLYCOSYL-PHOSPHATIDYL INOSITOL-ANCHORED FAMILY PROTEIN-RELATED Chr17 + View
Populus trichocarpa Potri.004G117100 PTHR31673:SF3 - COBRA-LIKE EXTRACELLULAR GLYCOSYL-PHOSPHATIDYL INOSITOL-ANCHORED FAMILY PROTEIN-RELATED Chr04 + View
Phaseolus vulgaris Phvul.004G041300 PF04833 - COBRA-like protein (COBRA) Chr04 + View
Phaseolus vulgaris Phvul.008G029000 PTHR31673:SF2 - COBRA-LIKE PROTEIN 4 Chr08 + View
Quercus lobata QL02p066275 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr2g0165011 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim08G0076100 chr08 + View
Rhododendron simsii Rhsim10G0055500 chr10 + View
Striga asiatica SGA_v2.0_scaffold148G36430 scaffold148 + View
Striga asiatica SGA_v2.0_scaffold52G19116 scaffold52 + View
Salvia bowleyana SalBow1G4851 GWHASIU00000001 + View
Salix brachista Sabra04G0070500 GWHAAZH00000004 + View
Salix brachista Sabra17G0085000 GWHAAZH00000017 + View
Simmondsia chinensis Sc11g0008740 GWHAASQ00000011 + View
Sechium edule Sed0012059 LG06 + View
Solanum lycopersicum Solyc03g070440.4 COBRA-like protein (AHRD V3.3 *** K4BHH3_SOLLC) SL4.0ch03 + View
Solanum lycopersicum Solyc02g089120.4 COBRA-like protein (AHRD V3.3 *** K4BC66_SOLLC) SL4.0ch02 + View
Solanum lycopersicum Solyc03g114880.3 COBRA-like protein (AHRD V3.3 *** A0A2G3A1W9_CAPAN) SL4.0ch03 + View
Solanum lycopersicum Solyc02g065765.1 COBRA-like protein (AHRD V3.3 *** K4B708_SOLLC) SL4.0ch02 - View
Schrenkiella parvula Sp3g01280 PF04833 - COBRA-like protein (COBRA) ch3-1 - View
Schrenkiella parvula Sp2g18070 PF04833 - COBRA-like protein (COBRA) ch2-4 + View
Schrenkiella parvula Sp6g28480 PTHR31673:SF2 - COBRA-LIKE PROTEIN 4 ch6-6 - View
Solanum pennellii Sopen03g033960 Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions. | COBRA (COB) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: response to salt stress, multidimensional cell growth, cellulose microfibril organization | LOCATED IN: in 6 components | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant , COBRA-like | BEST Arabidopsis thaliana protein match is: COBRA-like protein 1 precursor Spenn-ch03 + View
Solanum pennellii Sopen02g033910 Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions. | COBRA (COB) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: response to salt stress, multidimensional cell growth, cellulose microfibril organization | LOCATED IN: in 6 components | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant , COBRA-like | BEST Arabidopsis thaliana protein match is: COBRA-like protein 1 precursor Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400001027 Phytochelatin synthetase ST4.03ch03 + View
Solanum tuberosum PGSC0003DMG400026565 Protein COBRA ST4.03ch02 - View
Solanum tuberosum PGSC0003DMG400024530 Protein COBRA ST4.03ch03 + View
Solanum tuberosum PGSC0003DMG400001465 Protein COBRA ST4.03ch02 + View
Trochodendron aralioides TAR622G1167 group8 - View
Trochodendron aralioides TAR371G0859 group13 - View
Trochodendron aralioides TAR629G1899 group0 + View
Tarenaya hassleriana THA.LOC104820989 COBRA-like protein 4 NW_010966372.1 - View
Tarenaya hassleriana THA.LOC104802979 COBRA-like protein 1 NW_010970490.1 - View
Tarenaya hassleriana THA.LOC104805521 COBRA-like protein 2 NW_010961290.1 + View
Tripterygium wilfordii TWI32G0175 NC_052254.1 + View
Tripterygium wilfordii TWI60G0587 NC_052246.1 + View
Vaccinium macrocarpon vmacro18136 Similar to BC1L6: COBRA-like protein 1 (Oryza sativa subsp. japonica OX%3D39947) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0464G0462 CM024077.1 + View
Vigna mungo VMungo1383G0644 CM024070.1 + View
Vitis vinifera GSVIVG01008130001 chr17 + View
Vitis vinifera GSVIVG01036565001 chr14 + View
Zea mays Zm00001eb326990 Zm00001e035504 Brittle stalk-2-like protein 6 Protein COBRA 7 + View
Zea mays Zm00001eb393070 Zm00001e038043 Brittle stalk-2 brittle stalk2 9 + View