Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr9.1211 chr9 - View
Actinidia chinensis Actinidia10865 Lachesis_group14 - View
Actinidia chinensis Actinidia31493 Lachesis_group20 + View
Arabidopsis lyrata AL7G37000 scaffold_7 - View
Arabidopsis lyrata AL8G10970 scaffold_8 + View
Avicennia marina MSTRG.1952 ScioBoG_102834_HRSCAF_103055 + View
Amaranthus hybridus Ah.12g054000 Light-harvesting complex-like protein 3 isotype 1, chloroplastic (LHC-like protein 3 isoform 1) AmaHy_arrow1_Scaffold_12 - View
Aquilegia oxysepala Aqoxy3G02655 CHR03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.BV80JU PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ALKQ9T PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Z0I5FU PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.11 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.YIXS33 PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.01 - View
Arabidopsis thaliana AT4G17600 Chlorophyll A-B binding family protein Encodes Lil3:1 (light-harvesting-like) protein. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus. A generic LHC motif is present in Lil3:1. LIL3:1%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: chloroplast thylakoid membrane%2C chloroplast%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: Chlorophyll A-B binding family protein (TAIR:AT5G47110.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 + View
Arabidopsis thaliana AT5G47110 Chlorophyll A-B binding family protein Chlorophyll A-B binding family protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: photosynthesis%2C light harvesting%3B LOCATED IN: chloroplast thylakoid membrane%2C chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: Chlorophyll A-B binding family protein (TAIR:AT4G17600.1)%3B Has 86 Blast hits to 86 proteins in 29 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 0%3B Fungi - 0%3B Plants - 79%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink). Chr5 - View
Amborella trichopoda ATR0665G546 AmTr_v1.0_scaffold00002 + View
Brassica carinata BcaC04g21645 ChrC04 + View
Brassica carinata BcaC06g31415 ChrC06 + View
Brassica napus A02p30860 A02 - View
Brassica napus C07p30810 C07 - View
Brassica napus C02p48420 C02 - View
Brassica napus A09p22860 A09 - View
Brassica oleracea BolC2t10872H C2 - View
Brassica oleracea BolC7t43622H C7 - View
Brassica rapa BraA09t37888Z A09 - View
Brassica rapa BraA02t08099Z A02 - View
Beta vulgaris EL10Ac5g12275 PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED Chr5_EL10_PGA_scaffold2 - View
Capsicum annuum CAN.G845.20 PGAv.1.6.scaffold845 + View
Cannabis sativa CANSAT56G0024 NC_044371.1 + View
Cicer arietinum L. Ca_22013_v3 Ca_LG7_v3 + View
Coffea canephora Cc08_g11360 Chlorophyll A-B binding family protein chr8 - View
Citrus clementina Ciclev10021868m.g scaffold_3 - View
Ceratophyllum demersum CDE04G2971 2 - View
Ceratophyllum demersum CDE11G0936 9 + View
Carpinus fangiana Cfa012324 Cfa05 + View
Carpinus fangiana Cfa013605 Cfa05 - View
Cardamine hirsuta CARHR224320 Lil3 protein Chr7 + View
Cardamine hirsuta CARHR174280 Lil3 protein Chr6 + View
Carya illinoinensis CiPaw.11G072900 PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED Chr11 - View
Citrullus lanatus ClCG10G002240 Lil3 family protein CG_Chr10 - View
Cucumis melo MELO3C013899.2 Lil3 family protein chr06 - View
Chenopodium quinoa AUR62007164 Protein of unknown function C_Quinoa_Scaffold_1971 + View
Chenopodium quinoa AUR62018842 Protein of unknown function C_Quinoa_Scaffold_1817 - View
Capsella rubella Carub.0008s0064 PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED scaffold_8 + View
Cucumis sativus L. CsaV3_3G002280 Protein lingerer like chr3 - View
Daucus carota DCAR_005585 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv25133 GWHABJS00000017 + View
Davidia involucrata Dinv28875 GWHABJS00000003 + View
Durio zibethinus Duzib068G0843 NW_019167838.1 - View
Durio zibethinus Duzib205G0050 NW_019168381.1 - View
Erigeron canadensis ECA233G4390 Conyza_canadensis_scaffold:1 + View
Erigeron canadensis ECA240G0003 Conyza_canadensis_scaffold:5 + View
Eucalyptus grandis Eucgr.E00355 Chr05 - View
Eutrema salsugineum Thhalv10000997m.g PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED scaffold_20 - View
Fragaria x ananassa FAN08G3190 PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED Fvb5-3 - View
Fragaria x ananassa FAN13G2006 PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED Fvb5-2 + View
Fragaria x ananassa FAN04G2804 PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED Fvb5-4 + View
Fragaria x ananassa FAN18G0247 PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED Fvb5-1 + View
Fragaria vesca FvH4_5g20330 PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED Fvb5 + View
Gossypium hirsutum Gohir.A08G163300 PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED A08 - View
Gossypium hirsutum Gohir.D12G215500 PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED D12 - View
Gossypium hirsutum Gohir.A12G213000 PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED A12 - View
Gossypium hirsutum Gohir.D08G183100 PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED D08 - View
Glycine max Glyma.17G147900 PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED Gm17 + View
Glycine max Glyma.05G066100 PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED Gm05 + View
Glycine max Glyma.01G204700 PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED Gm01 - View
Gossypium raimondii Gorai.008G231100 Chr08 - View
Gossypium raimondii Gorai.004G192200 Chr04 - View
Helianthus annuus HanXRQChr03g0089741 Probable chlorophyll A-B binding family protein HanXRQChr03 - View
Helianthus annuus HanXRQChr13g0418271 Putative chlorophyll a/b binding protein domain HanXRQChr13 + View
Lupinus albus Lalb_Chr16g0386441 PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED Lalb_Chr16 - View
Lupinus albus Lalb_Chr05g0220921 PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED Lalb_Chr05 - View
Lotus japonicus Lj4g0023884 PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED chr4 + View
Lonicera japonica Lj8A276T43 GWHAAZE00000008 + View
Lactuca sativa Lsat_1_v5_gn_6_95120 PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED Lsat_1_v8_lg_6 + View
Magnolia biondii MBI04_g13853_MAGBIO AED:0.04 Chr04 + View
Malus domestica MD04G1055800 Chlorophyll A-B binding family protein Chr04 - View
Malus domestica MD06G1047300 Chlorophyll A-B binding family protein Chr06 - View
Manihot esculenta Manes.02G045000 Chromosome02 + View
Manihot esculenta Manes.01G088500 Chromosome01 + View
Medicago truncatula Medtr4g099330 light harvesting-like protein chr4 - View
Nelumbo nucifera Nn1g00765 chr1 - View
Nelumbo nucifera Nn6g33762 chr6 + View
Nicotiana tabacum Nitab4.5_0006594g0060 Chlorophyll a/b binding protein domain Nitab4.5_0006594 + View
Nicotiana tabacum Nitab4.5_0000185g0170 Unknown Nitab4.5_0000185 + View
Olea europaea Oeu040672.1 scaffold372 + View
Petunia axillaris Peaxi162Scf00102g00088 Chlorophyll A-B binding family protein Peaxi162Scf00102 - View
Punica granatum PGR042G0534 NC_045130.1 - View
Prunus persica Prupe.2G269900 PTHR14154//PTHR14154:SF13 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED Pp02 + View
Pisum sativum Psat4g075640 Unknown gene chr4LG4 + View
Papaver somniferum PSO063G1214 NC_039364.1 + View
Populus trichocarpa Potri.001G151300 PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED Chr01 - View
Populus trichocarpa Potri.003G083500 PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED Chr03 + View
Phaseolus vulgaris Phvul.003G225000 PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED Chr03 + View
Quercus lobata QL12p008813 12 - View
Rosa chinensis RcHm_v2.0_Chr7g0205511 RcHm_v2.0_Chr7 + View
Rhododendron simsii Rhsim07G0119300 chr07 + View
Salvia bowleyana SalBow3G4192 GWHASIU00000006 - View
Salix brachista Sabra03G0054100 GWHAAZH00000003 + View
Salix brachista Sabra01G0121200 GWHAAZH00000001 - View
Simmondsia chinensis Sc01g0008000 GWHAASQ00000001 - View
Sechium edule Sed0007170 LG04 - View
Solanum lycopersicum Solyc08g007180.3 Chlorophyll A-B binding protein (AHRD V3.3 *** A0A200RAS0_9MAGN) SL4.0ch08 - View
Solanum lycopersicum Solyc08g077880.3 Chlorophyll A-B binding protein (AHRD V3.3 *** A0A200RAS0_9MAGN) SL4.0ch08 - View
Schrenkiella parvula Sp2g11920 PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED ch2-4 - View
Solanum pennellii Sopen08g026390 Chlorophyll A-B binding family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: photosynthesis, light harvesting | LOCATED IN: chloroplast thylakoid membrane, chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | BEST Arabidopsis thaliana protein match is: Chlorophyll A-B binding family protein Spenn-ch08 - View
Solanum pennellii Sopen08g003130 Encodes Lil3:1 (light-harvesting-like) protein. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus. A generic LHC motif is present in Lil3:1. | LIL3:1 | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription | LOCATED IN: chloroplast thylakoid membrane, chloroplast | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | BEST Arabidopsis thaliana protein match is: Chlorophyll A-B binding family protein Spenn-ch08 - View
Solanum tuberosum PGSC0003DMG400020492 Light harvesting 3 ST4.03ch08 + View
Solanum tuberosum PGSC0003DMG400026245 Transcription factor ST4.03ch08 - View
Selenicereus undatus Hund11318 Scaffold_10417 - View
Trochodendron aralioides TAR636G1068 group1 + View
Trochodendron aralioides TAR375G0308 group15 + View
Theobroma cacao Thecc.03G240800 Light harvesting-like protein 3 Chromosome_3 - View
Tripterygium wilfordii TWI60G0531 NC_052246.1 - View
Tripterygium wilfordii TWI15G0197 NC_052247.1 + View
Vaccinium macrocarpon vmacro14123 Similar to LIL3.1: Light-harvesting complex-like protein 3 isotype 1, chloroplastic (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0251G3117 CM024069.1 + View