Gene: Solyc08g077880.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc08g077880.3
- Transcript Identifier Solyc08g077880.3.1
- Gene Type Coding gene
- Location SL4.0ch08 : 59897794-59899485 : negative
Gene Family Information
- ID HOM05D002840
- #Genes/#Species 244/99
- Phylogenetic origin
- ID ORTHO05D003088
- #Genes/#Species 245/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc08g077880.3.1
- uniprot A0A3Q7INJ8
- gene_id Solyc08g077880
Descriptions
- Description Chlorophyll A-B binding protein (AHRD V3.3 *** A0A200RAS0_9MAGN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:1904966 | ISO | PLAZA Integrative Orthology | positive regulation of vitamin E biosynthetic process | AT5G47110 |
| GO:1902326 | ISO | PLAZA Integrative Orthology | positive regulation of chlorophyll biosynthetic process | AT5G47110 |
| GO:1904964 | ISO | PLAZA Integrative Orthology | positive regulation of phytol biosynthetic process | AT5G47110 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042802 | ISO | PLAZA Integrative Orthology | identical protein binding | AT5G47110 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G47110 |
| GO:0043495 | ISO | PLAZA Integrative Orthology | protein-membrane adaptor activity | AT5G47110 |
| GO:0019899 | ISO | PLAZA Integrative Orthology | enzyme binding | AT5G47110 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009535 | IBA | GOA Database | chloroplast thylakoid membrane | |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G47110 |
| GO:0042651 | ISO | PLAZA Integrative Orthology | thylakoid membrane | AT5G47110 |
| GO:0009503 | ISO | PLAZA Integrative Orthology | thylakoid light-harvesting complex | AT5G47110 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
No InterPro domains detected for this gene.
| Mapman id | Description |
|---|---|
| 1.1.1.3.23 | Photosynthesis.photophosphorylation.photosystem II.assembly.LHCII-stabilizing factor (SEP3) |