Gene: PGR042G0534
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR042G0534
- Transcript Identifier PGR042G0534.01
- Gene Type Coding gene
- Location NC_045130.1 : 1549648-1551234 : negative
Gene Family Information
- ID HOM05D002840
- #Genes/#Species 244/99
- Phylogenetic origin
- ID ORTHO05D003088
- #Genes/#Species 245/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pid XP_031391369.1
- name LOC116203657
- name XM_031535509.1
- id gene-LOC116203657
- uniprot A0A218XTG2
Descriptions
- product light-harvesting complex-like protein 3 isotype 2, chloroplastic
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:1904966 | ISO | PLAZA Integrative Orthology | positive regulation of vitamin E biosynthetic process | AT4G17600 |
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT4G17600 |
| GO:1902326 | ISO | PLAZA Integrative Orthology | positive regulation of chlorophyll biosynthetic process | AT4G17600 |
| GO:1904964 | ISO | PLAZA Integrative Orthology | positive regulation of phytol biosynthetic process | AT4G17600 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042802 | ISO | PLAZA Integrative Orthology | identical protein binding | AT4G17600 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G17600 |
| GO:0043495 | ISO | PLAZA Integrative Orthology | protein-membrane adaptor activity | AT4G17600 |
| GO:0019899 | ISO | PLAZA Integrative Orthology | enzyme binding | AT4G17600 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT4G17600 |
| GO:0042651 | ISO | PLAZA Integrative Orthology | thylakoid membrane | AT4G17600 |
| GO:0009503 | ISO | PLAZA Integrative Orthology | thylakoid light-harvesting complex | AT4G17600 |
| GO:0009535 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid membrane | AT4G17600 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR023329 | Chlorophyll a/b binding domain superfamily |
| Mapman id | Description |
|---|---|
| 1.1.1.3.23 | Photosynthesis.photophosphorylation.photosystem II.assembly.LHCII-stabilizing factor (SEP3) |