Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0042749 PREDICTED: cullin-1-like isoform X1 [Nicotiana tomentosiformis] Chr6 + View
CSS0026292 PREDICTED: cullin-1-like [Nicotiana sylvestris] Chr13 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G2200 LG-5 + View
Acer truncatum Atru.chr5.1233 chr5 + View
Acer truncatum Atru.chr4.2808 chr4 - View
Actinidia chinensis Actinidia00672 Lachesis_group19 + View
Actinidia chinensis Actinidia21064 Lachesis_group9 - View
Actinidia chinensis Actinidia24845 Lachesis_group15 - View
Actinidia chinensis Actinidia00038 Lachesis_group10 + View
Arabidopsis lyrata AL6G50470 scaffold_6 - View
Arabidopsis lyrata AL1G12430 scaffold_1 + View
Amaranthus hybridus Ah.06g189500 AmaHy_arrow1_Scaffold_6 - View
Aquilegia oxysepala Aqoxy5G00654 CHR05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.A70C4S KOG2166 - Cullins arahy.Tifrunner.gnm1.Arahy.02 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.A4TJW4 K03347 - cullin 1 (CUL1, CDC53) arahy.Tifrunner.gnm1.Arahy.04 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.XAP853 KOG2166 - Cullins arahy.Tifrunner.gnm1.Arahy.12 - View
Arabidopsis thaliana AT4G02570 cullin 1 Encodes a cullin that is a component of SCF ubiquitin ligase complexes involved in mediating responses to auxin and jasmonic acid. Homozygous auxin-resistant mutants arrest growth soon after germination%2C lacking a root and hypocotyl. Heterozygotes display a variety of phenotypes consistent with impaired auxin response. cullin 1 (CUL1)%3B CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991)%2C Cullin protein%2C neddylation domain (InterPro:IPR019559)%2C Cullin homology (InterPro:IPR016158)%2C Cullin%2C N-terminal (InterPro:IPR001373)%2C Cullin%2C conserved site (InterPro:IPR016157)%2C Cullin repeat-like-containing domain (InterPro:IPR016159)%3B BEST Arabidopsis thaliana protein match is: cullin 2 (TAIR:AT1G02980.1)%3B Has 2243 Blast hits to 2199 proteins in 231 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 958%3B Fungi - 500%3B Plants - 373%3B Viruses - 0%3B Other Eukaryotes - 412 (source: NCBI BLink). cullin 1 (CUL1)%3B CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991)%2C Cullin homology (InterPro:IPR016158)%2C Cullin protein%2C neddylation domain (InterPro:IPR019559)%2C Cullin%2C conserved site (InterPro:IPR016157)%2C Cullin%2C N-terminal (InterPro:IPR001373)%2C Cullin repeat-like-containing domain (InterPro:IPR016159)%3B BEST Arabidopsis thaliana protein match is: cullin 2 (TAIR:AT1G02980.1). Chr4 + View
Arabidopsis thaliana AT1G02980 cullin 2 encodes an Arabidopsis cullin cullin 2 (CUL2)%3B FUNCTIONS IN: ubiquitin protein ligase binding%3B INVOLVED IN: cell cycle%2C ubiquitin-dependent protein catabolic process%3B LOCATED IN: SCF ubiquitin ligase complex%2C chloroplast envelope%3B EXPRESSED IN: sperm cell%2C flower%3B EXPRESSED DURING: petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991)%2C Cullin homology (InterPro:IPR016158)%2C Cullin protein%2C neddylation domain (InterPro:IPR019559)%2C Cullin%2C N-terminal (InterPro:IPR001373)%2C Cullin repeat-like-containing domain (InterPro:IPR016159)%3B BEST Arabidopsis thaliana protein match is: Cullin family protein (TAIR:AT1G43140.1)%3B Has 2240 Blast hits to 2201 proteins in 240 species: Archae - 0%3B Bacteria - 18%3B Metazoa - 947%3B Fungi - 508%3B Plants - 372%3B Viruses - 0%3B Other Eukaryotes - 395 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaC05g24579 ChrC05 + View
Brassica carinata BcaC03g16148 ChrC03 + View
Brassica carinata BcaB03g15746 ChrB03 - View
Brassica carinata BcaB05g23645 ChrB05 + View
Brassica napus C05p01600 C05 + View
Brassica napus A10p01610 A10 + View
Brassica oleracea BolC5t28939H C5 + View
Brassica rapa BraA10t42437Z A10 + View
Cannabis sativa CANSAT78G1438 NC_044376.1 + View
Cicer arietinum L. Ca_09133_v3 Ca_LG3_v3 - View
Corylus avellana Haze_04857 Similar to CUL1: Cullin-1 (Arabidopsis thaliana OX%3D3702) 2 - View
Corylus avellana Haze_04173 Similar to CUL1: Cullin-1 (Oryza sativa subsp. japonica OX%3D39947) 2 + View
Corylus avellana Haze_01230 Similar to CUL1: Cullin-1 (Oryza sativa subsp. japonica OX%3D39947) 1 + View
Coffea canephora Cc01_g20500 Cullin-1 chr1 - View
Coffea canephora Cc03_g02030 Cullin-1 chr3 + View
Citrus clementina Ciclev10004406m.g scaffold_9 + View
Citrus clementina Ciclev10019010m.g scaffold_3 - View
Ceratophyllum demersum CDE05G2528 3 + View
Carpinus fangiana Cfa006606 Cfa02 - View
Carpinus fangiana Cfa005988 Cfa02 + View
Cardamine hirsuta CARHR250860 cullin 1 Chr8 + View
Cardamine hirsuta CARHR002310 cullin 1 Chr1 + View
Carya illinoinensis CiPaw.07G103500 K03347 - cullin 1 (CUL1, CDC53) Chr07 - View
Carya illinoinensis CiPaw.02G084200 K03347 - cullin 1 (CUL1, CDC53) Chr02 + View
Carya illinoinensis CiPaw.01G150100 K03347 - cullin 1 (CUL1, CDC53) Chr01 + View
Citrullus lanatus ClCG06G005250 Cullin-1, putative CG_Chr06 + View
Cucumis melo MELO3C021345.2 cullin-1 chr11 - View
Cucumis melo MELO3C006647.2 cullin-1 chr06 - View
Corchorus olitorius COL.COLO4_07999 hypothetical protein AWUE01013551.1 + View
Carica papaya Cpa.g.sc9.188 supercontig_9 - View
Chenopodium quinoa AUR62000805 CUL1: Cullin-1 C_Quinoa_Scaffold_2088 + View
Chenopodium quinoa AUR62005163 CUL1: Cullin-1 C_Quinoa_Scaffold_3820 - View
Capsella rubella Carub.0006s3456 K03943 - NADH dehydrogenase (ubiquinone) flavoprotein 2 (NDUFV2) scaffold_6 - View
Capsella rubella Carub.0001s0211 KOG2166 - Cullins scaffold_1 + View
Cucumis sativus L. CsaV3_3G014450 cullin 1 chr3 - View
Cucumis sativus L. CsaV3_6G017300 cullin-1 chr6 + View
Daucus carota DCAR_002806 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv19734 GWHABJS00000007 + View
Davidia involucrata Dinv44395 GWHABJS00000014 - View
Davidia involucrata Dinv33020 GWHABJS00000010 - View
Durio zibethinus Duzib151G0191 NW_019167904.1 - View
Durio zibethinus Duzib211G0471 NW_019168049.1 + View
Durio zibethinus Duzib177G0886 NW_019168004.1 - View
Durio zibethinus Duzib052G0656 NW_019167849.1 - View
Durio zibethinus Duzib138G0518 NW_019167893.1 + View
Durio zibethinus Duzib133G1097 NW_019167938.1 + View
Erigeron canadensis ECA236G4598 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.H03886 Chr08 - View
Erythranthe guttata Migut.D00181 scaffold_4 - View
Erythranthe guttata Migut.G00176 scaffold_7 + View
Eutrema salsugineum Thhalv10028463m.g scaffold_3 + View
Eutrema salsugineum Thhalv10009855m.g PTHR11932:SF72 - CULLIN-1-RELATED scaffold_5 - View
Fragaria x ananassa FAN27G2735 K03347 - cullin 1 (CUL1, CDC53) Fvb2-1 - View
Fragaria x ananassa FAN05G3671 K03347 - cullin 1 (CUL1, CDC53) Fvb6-3 + View
Fragaria x ananassa FAN15G1168 K03347 - cullin 1 (CUL1, CDC53) Fvb2-4 - View
Fragaria x ananassa FAN24G1069 K03347 - cullin 1 (CUL1, CDC53) Fvb2-2 + View
Fragaria x ananassa FAN20G1498 PF00888//PF02536//PF10557 - Cullin family (Cullin) // mTERF (mTERF) // Cullin protein neddylation domain (Cullin_Nedd8) Fvb2-3 + View
Fragaria vesca FvH4_2g25090 KOG2166//KOG2167 - Cullins // Cullins Fvb2 - View
Gossypium hirsutum Gohir.A12G009700 K03347 - cullin 1 (CUL1, CDC53) A12 - View
Gossypium hirsutum Gohir.A13G108200 PTHR11932//PTHR11932:SF84 - CULLIN // SUBFAMILY NOT NAMED A13 - View
Gossypium hirsutum Gohir.D11G121500 K03347 - cullin 1 (CUL1, CDC53) D11 + View
Gossypium hirsutum Gohir.A11G116400 K03347 - cullin 1 (CUL1, CDC53) A11 + View
Gossypium hirsutum Gohir.D12G009700 K03347 - cullin 1 (CUL1, CDC53) D12 - View
Gossypium hirsutum Gohir.D08G138020 KOG2166 - Cullins D08 - View
Glycine max Glyma.19G208600 K03347 - cullin 1 (CUL1, CDC53) Gm19 - View
Glycine max Glyma.03G211400 K03347 - cullin 1 (CUL1, CDC53) Gm03 - View
Glycine max Glyma.07G249100 K03347 - cullin 1 (CUL1, CDC53) Gm07 + View
Gossypium raimondii Gorai.004G141400 Chr04 - View
Gossypium raimondii Gorai.013G124800 Chr13 - View
Gossypium raimondii Gorai.007G130200 Chr07 + View
Gossypium raimondii Gorai.008G009700 Chr08 - View
Lotus japonicus Lj1g0006325 PTHR11932//PTHR11932:SF84 - CULLIN // SUBFAMILY NOT NAMED chr1 - View
Lonicera japonica Lj3A815G51 GWHAAZE00000003 - View
Lonicera japonica Lj1A35T65 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_8_54481 K03347 - cullin 1 (CUL1, CDC53) Lsat_1_v8_lg_8 + View
Magnolia biondii MBI19_g41324_MAGBIO AED:0.22 Chr19 + View
Malus domestica MD13G1170300 cullin 1 Chr13 + View
Malus domestica MD03G1282100 cullin 1 Chr03 - View
Malus domestica MD11G1301900 cullin 1 Chr11 - View
Malus domestica MD16G1171700 cullin 1 Chr16 + View
Manihot esculenta Manes.03G193200 Chromosome03 - View
Manihot esculenta Manes.08G120000 Chromosome08 + View
Manihot esculenta Manes.14G005900 Chromosome14 + View
Manihot esculenta Manes.09G168400 Chromosome09 - View
Medicago truncatula Medtr7g108340 cullin 3B chr7 - View
Olea europaea Oeu011426.1 scaffold1435 - View
Petunia axillaris Peaxi162Scf00067g01924 cullin 1 Peaxi162Scf00067 + View
Petunia axillaris Peaxi162Scf00037g00717 cullin 1 Peaxi162Scf00037 - View
Prunus persica Prupe.8G255500 K03347 - cullin 1 (CUL1, CDC53) Pp08 - View
Prunus persica Prupe.1G138700 K03347 - cullin 1 (CUL1, CDC53) Pp01 + View
Pisum sativum Psat3g023520 Cullin family chr3LG5 + View
Papaver somniferum PSO210G6328 NC_039359.1 - View
Papaver somniferum PSO210G0052 NC_039359.1 - View
Papaver somniferum PSO170G1235 NC_039360.1 - View
Populus trichocarpa Potri.005G027800 PTHR11932//PTHR11932:SF72 - CULLIN // CULLIN-1-RELATED Chr05 + View
Populus trichocarpa Potri.013G020000 PTHR11932//PTHR11932:SF72 - CULLIN // CULLIN-1-RELATED Chr13 + View
Quercus lobata QL06p008391 6 - View
Quercus lobata QL12p030631 12 + View
Rosa chinensis RcHm_v2.0_Chr6g0293141 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim07G0185800 chr07 + View
Rhododendron simsii Rhsim01G0282200 chr01 - View
Rhododendron simsii Rhsim13G0015200 chr13 + View
Simmondsia chinensis Sc19g0005080 GWHAASQ00000019 - View
Sechium edule Sed0015748 LG04 + View
Sechium edule Sed0010368 LG02 + View
Solanum lycopersicum Solyc01g099290.3 Cullin (AHRD V3.3 *** A0A2U1PNZ9_ARTAN) SL4.0ch01 - View
Solanum lycopersicum Solyc09g074680.3 Cullin (AHRD V3.3 *** A0A2U1Q0J3_ARTAN) SL4.0ch09 - View
Schrenkiella parvula Sp1g01970 PTHR11932//PTHR11932:SF72 - CULLIN // CULLIN-1-RELATED ch1-1 + View
Solanum pennellii Sopen01g042840 Encodes a cullin that is a component of SCF ubiquitin ligase complexes involved in mediating responses to auxin and jasmonic acid. Homozygous auxin-resistant mutants arrest growth soon after germination, lacking a root and hypocotyl. Heterozygotes display a variety of phenotypes consistent with impaired auxin response. | cullin 1 (CUL1) | CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding , Cullin homology , Cullin protein, neddylation domain , Cullin, conserved site , Cullin, N-terminal , Cullin repeat-like-containing domain | BEST Arabidopsis thaliana protein match is: cullin 2 . Spenn-ch01 - View
Solanum pennellii Sopen09g029560 Encodes a cullin that is a component of SCF ubiquitin ligase complexes involved in mediating responses to auxin and jasmonic acid. Homozygous auxin-resistant mutants arrest growth soon after germination, lacking a root and hypocotyl. Heterozygotes display a variety of phenotypes consistent with impaired auxin response. | cullin 1 (CUL1) | CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding , Cullin homology , Cullin protein, neddylation domain , Cullin, conserved site , Cullin, N-terminal , Cullin repeat-like-containing domain | BEST Arabidopsis thaliana protein match is: cullin 2 ., Cullin, N-terminal Spenn-ch09 - View
Solanum tuberosum PGSC0003DMG400024743 Plastid CUL1 ST4.03ch01 - View
Trochodendron aralioides TAR636G0132 group1 - View
Trochodendron aralioides TAR362G1021 group17 + View
Trochodendron aralioides TAR633G1636 group2 - View
Theobroma cacao Thecc.01G293800 Cullin 1 Chromosome_1 - View
Theobroma cacao Thecc.04G282500 Cullin 1 Chromosome_4 - View
Tarenaya hassleriana THA.LOC104815935 cullin-1-like NW_010965696.1 + View
Tarenaya hassleriana THA.LOC104801256 NADH dehydrogenase [ubiquinone] flavoprotein 2%2C mitochondrial-like NW_010969548.1 - View
Trifolium pratense TPR.G9282 Tp57577_TGAC_v2_LG6 + View
Tripterygium wilfordii TWI14G0245 NC_052249.1 + View
Tripterygium wilfordii TWI23G0497 NC_052239.1 + View
Tripterygium wilfordii TWI56G0462 NC_052242.1 + View
Tripterygium wilfordii TWI73G0907 NC_052232.1 + View
Vaccinium macrocarpon vmacro02488 Similar to CUL1: Cullin-1 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1309G1220 CM024072.1 + View
Vitis vinifera GSVIVG01010966001 chr7 + View
Zea mays Zm00001eb142010 Zm00001e018714 Putative cullin-like protein 2 3 - View