Gene: AT4G02570

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G02570
  • Transcript Identifier AT4G02570.4
  • Gene Type Coding gene
  • Location Chr4 : 1129315-1133435 : positive

Gene Family Information

  • ID HOM05D000319
  • #Genes/#Species 1449/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G02570.4
  • symbol CUL1
  • Alias ATCUL1,cullin 1,AXR6,AUXIN RESISTANT 6
  • uniprot Q94AH6

Descriptions

  • Description cullin 1
  • Computational description cullin 1 (CUL1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin homology (InterPro:IPR016158), Cullin, N-terminal (InterPro:IPR001373), Cullin, conserved site (InterPro:IPR016157), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 2 (TAIR:AT1G02980.1); Has 2243 Blast hits to 2199 proteins in 231 species: Archae - 0; Bacteria - 0; Metazoa - 958; Fungi - 500; Plants - 373; Viruses - 0; Other Eukaryotes - 412 (source: NCBI BLink).
  • Computational description cullin 1 (CUL1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, conserved site (InterPro:IPR016157), Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 2 (TAIR:AT1G02980.1).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IBA
IEA
Gene Ontologyprotein ubiquitination1
GO:0007049
IEA
GOA Databasecell cycle
GO:0009734
IEA
GOA Databaseauxin-activated signaling pathway
GO:0009873
IEA
GOA Databaseethylene-activated signaling pathway
GO:0006511
IEA
Gene Ontologyubiquitin-dependent protein catabolic process
GO:0006511
IEA
InterProubiquitin-dependent protein catabolic process
GO:0009733
IMP
Gene Ontologyresponse to auxin2
GO:0009793
IMP
Gene Ontologyembryo development ending in seed dormancy2
GO:0009753
IMP
Gene Ontologyresponse to jasmonic acid3
GO:0009867
TAS
Gene Ontologyjasmonic acid mediated signaling pathway3
GO:0010265
IPI
Gene OntologySCF complex assembly3
GO:0042752
IMP
Gene Ontologyregulation of circadian rhythm4
GO:0010087
IMP
Gene Ontologyphloem or xylem histogenesis5
GO:0048366
IMP
Gene Ontologyleaf development5

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031625
IEA
GOA Databaseubiquitin protein ligase binding
GO:0031625
IBA
Gene Ontologyubiquitin protein ligase binding1
GO:0031625
IEA
InterProubiquitin protein ligase binding
GO:0004842
IBA
Gene Ontologyubiquitin-protein transferase activity1
GO:0005515
IPI
Gene Ontologyprotein binding6

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005856
IEA
GOA Databasecytoskeleton
GO:0031461
IEA
GOA Databasecullin-RING ubiquitin ligase complex
GO:0031461
IBA
Gene Ontologycullin-RING ubiquitin ligase complex1
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IDA
Gene Ontologycytoplasm7
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
Gene Ontologynucleus8
GO:0009524
IEA
GOA Databasephragmoplast
GO:0009524
IDA
Gene Ontologyphragmoplast8
GO:0005819
IEA
GOA Databasespindle
GO:0005819
IDA
Gene Ontologyspindle8
GO:0005829
IDA
GOA Databasecytosol
GO:0000794
IDA
Gene Ontologycondensed nuclear chromosome7
GO:0000151
IPI
Gene Ontologyubiquitin ligase complex9

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036317 Cullin homology domain superfamily
IPR019559 Cullin protein, neddylation domain
IPR016158 Cullin homology domain
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR045093 Cullin
IPR016159 Cullin repeat-like-containing domain superfamily
IPR036390 Winged helix DNA-binding domain superfamily
IPR001373 Cullin, N-terminal
Mapman id Description
19.2.2.8.1.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.scaffold component CUL1/CUL2