Gene: AT1G02980

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G02980
  • Transcript Identifier AT1G02980.1
  • Gene Type Coding gene
  • Location Chr1 : 677869-681212 : positive

Gene Family Information

  • ID HOM05D000319
  • #Genes/#Species 1449/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G02980.1
  • symbol CUL2
  • Alias ATCUL2
  • uniprot Q9SRZ0

Descriptions

  • Description cullin 2
  • Computational description cullin 2 (CUL2); FUNCTIONS IN: ubiquitin protein ligase binding; INVOLVED IN: cell cycle, ubiquitin-dependent protein catabolic process; LOCATED IN: SCF ubiquitin ligase complex, chloroplast envelope; EXPRESSED IN: sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: Cullin family protein (TAIR:AT1G43140.1); Has 2240 Blast hits to 2201 proteins in 240 species: Archae - 0; Bacteria - 18; Metazoa - 947; Fungi - 508; Plants - 372; Viruses - 0; Other Eukaryotes - 395 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
IEA
Gene Ontologyubiquitin-dependent protein catabolic process
GO:0006511
IEA
InterProubiquitin-dependent protein catabolic process
GO:0016567
IBA
Gene Ontologyprotein ubiquitination1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding2
GO:0004842
IBA
Gene Ontologyubiquitin-protein transferase activity1
GO:0031625
IEA
GOA Databaseubiquitin protein ligase binding
GO:0031625
IBA
Gene Ontologyubiquitin protein ligase binding1
GO:0031625
IEA
InterProubiquitin protein ligase binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019005
ISS
Gene OntologySCF ubiquitin ligase complex2
GO:0009941
IDA
GOA Databasechloroplast envelope
GO:0009941
HDA
Gene Ontologychloroplast envelope3
GO:0031461
IBA
Gene Ontologycullin-RING ubiquitin ligase complex1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001373 Cullin, N-terminal
IPR019559 Cullin protein, neddylation domain
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR036317 Cullin homology domain superfamily
IPR036390 Winged helix DNA-binding domain superfamily
IPR045093 Cullin
IPR016159 Cullin repeat-like-containing domain superfamily
IPR016158 Cullin homology domain
Mapman id Description
19.2.2.8.1.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.scaffold component CUL1/CUL2