Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr6.1419 chr6 + View
Actinidia chinensis Actinidia30059 Lachesis_group24 + View
Actinidia chinensis Actinidia09472 Lachesis_group15 + View
Actinidia chinensis Actinidia31462 Lachesis_group20 + View
Arabidopsis lyrata AL3G40780 scaffold_3 + View
Avicennia marina MSTRG.17997 ScioBoG_19834_HRSCAF_19925 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.TEYT15 PTHR33159//PTHR33159:SF6 - FAMILY NOT NAMED // RPM1-INTERACTING PROTEIN 4 arahy.Tifrunner.gnm1.Arahy.19 - View
Arabidopsis thaliana AT3G25070 RPM1 interacting protein 4 Encodes a member of the R protein complex and may represent a virulence target of type III pili effector proteins (virulence factors) from bacterial pathogens%2C which is 'guarded' by R protein complex (RPM1 and RPS2 proteins). RIN4 physically interacts with RPS2 and RPM1 in vivo. Bacterial avirulence (Avr) effectors AvrB%2C AvrRpm1%2C and AvrRpt2 induce a mobility shift in RIN4 and expression of AvrRpt2 induces rapid degradation of RIN4. RIN4 contains 2 sites for AvrRpt2 autocleavage%2C called RCS1 and RCS2. Overexpression of RIN4 inhibits multiple phenotypes associated with AvrRpt2 function and also inhibits PAMP-induced defense signaling. Attached to the plasma membrane at its carboxyl terminus. Cleaved by AvrRpt2 at two PxFGxW motifs%2C one releasing a large portion of RIN4 from the plasma membrane and both exposing amino-terminal residues that destabilized the carboxyl-terminal cleavage products by targeting them for N-end ubiquitylation and proteasomal degradation. Major virulence target of the TTSE HopF2Pto. RPM1 interacting protein 4 (RIN4)%3B FUNCTIONS IN: protein binding%3B INVOLVED IN: in 6 processes%3B LOCATED IN: plasma membrane%2C membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4%2C defence response (InterPro:IPR008700)%3B BEST Arabidopsis thaliana protein match is: defense protein-related (TAIR:AT5G48657.2)%3B Has 373 Blast hits to 371 proteins in 56 species: Archae - 0%3B Bacteria - 8%3B Metazoa - 13%3B Fungi - 2%3B Plants - 331%3B Viruses - 0%3B Other Eukaryotes - 19 (source: NCBI BLink). Chr3 + View
Amborella trichopoda ATR0069G060 AmTr_v1.0_scaffold00117 + View
Brassica carinata BcaC06g35778 ChrC06 + View
Brassica carinata BcaB06g26730 ChrB06 - View
Brassica napus C07p11000 C07 - View
Brassica napus A03p44020 A03 + View
Brassica oleracea BolC7t41569H C7 - View
Capsicum annuum CAN.G874.2 PGAv.1.6.scaffold874 + View
Cannabis sativa CANSAT01G0795 NC_044373.1 - View
Cicer arietinum L. Ca_23229_v3 Ca_LG7_v3 - View
Corylus avellana Haze_11636 Similar to RIN4: RPM1-interacting protein 4 (Arabidopsis thaliana OX%3D3702) 9 + View
Coffea canephora Cc01_g16790 Putative RPM1-interacting protein 4 chr1 - View
Citrus clementina Ciclev10021726m.g scaffold_3 - View
Cardamine hirsuta CARHR101410 RPM1 interacting protein 4 Chr3 + View
Carya illinoinensis CiPaw.01G118400 PTHR33159:SF6 - RPM1-INTERACTING PROTEIN 4 Chr01 - View
Citrullus lanatus ClCG09G008810 RPM1-interacting protein 4 CG_Chr09 - View
Cucumis melo MELO3C021057.2 RPM1-interacting protein 4 chr01 + View
Carica papaya Cpa.g.sc8.126 supercontig_8 - View
Capsella rubella Carub.0003s2542 K13456 - RPM1-interacting protein 4 (RIN4) scaffold_3 + View
Cucumis sativus L. CsaV3_7G026140 RPM1-interacting protein 4 chr7 + View
Daucus carota DCAR_018639 hypothetical protein DCARv2_Chr5 - View
Daucus carota DCAR_012662 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv12658 GWHABJS00000007 + View
Davidia involucrata Dinv19181 GWHABJS00000010 - View
Durio zibethinus Duzib211G0360 NW_019168049.1 + View
Durio zibethinus Duzib138G0625 NW_019167893.1 + View
Durio zibethinus Duzib133G1090 NW_019167938.1 + View
Erigeron canadensis ECA247G1857 Conyza_canadensis_scaffold:7 - View
Eucalyptus grandis Eucgr.H00779 Chr08 - View
Eucalyptus grandis Eucgr.K02142 Chr11 - View
Erythranthe guttata Migut.N00628 scaffold_14 + View
Erythranthe guttata Migut.D02499 scaffold_4 + View
Eutrema salsugineum Thhalv10002991m.g K13456 - RPM1-interacting protein 4 (RIN4) scaffold_4 - View
Fragaria x ananassa FAN27G2350 K13456 - RPM1-interacting protein 4 (RIN4) Fvb2-1 - View
Fragaria x ananassa FAN24G2024 K13456 - RPM1-interacting protein 4 (RIN4) Fvb2-2 + View
Fragaria x ananassa FAN15G3260 K13456 - RPM1-interacting protein 4 (RIN4) Fvb2-4 - View
Fragaria vesca FvH4_2g18650 PTHR33159:SF6 - RPM1-INTERACTING PROTEIN 4 Fvb2 - View
Gossypium hirsutum Gohir.D07G206100 K13456 - RPM1-interacting protein 4 (RIN4) D07 - View
Gossypium hirsutum Gohir.A07G199700 K13456 - RPM1-interacting protein 4 (RIN4) A07 - View
Glycine max Glyma.03G084000 K13456 - RPM1-interacting protein 4 (RIN4) Gm03 + View
Glycine max Glyma.08G349500 K13456 - RPM1-interacting protein 4 (RIN4) Gm08 - View
Gossypium raimondii Gorai.001G232400 Chr01 - View
Helianthus annuus HanXRQChr10g0279471 Probable RPM1 interacting protein 4 HanXRQChr10 + View
Lupinus albus Lalb_Chr03g0041531 PTHR33159//PTHR33159:SF6 - FAMILY NOT NAMED // RPM1-INTERACTING PROTEIN 4 Lalb_Chr03 - View
Lupinus albus Lalb_Chr01g0022231 PTHR33159:SF6 - RPM1-INTERACTING PROTEIN 4 Lalb_Chr01 - View
Lupinus albus Lalb_Chr19g0125811 K13456 - RPM1-interacting protein 4 (RIN4) Lalb_Chr19 + View
Lotus japonicus Lj3g0021651 PTHR33159:SF6 - RPM1-INTERACTING PROTEIN 4 chr3 - View
Lonicera japonica Lj2A1127T51 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_9_15261 Lsat_1_v8_lg_9 + View
Malus domestica MD10G1160600 RPM1 interacting protein 4 Chr10 - View
Malus domestica MD05G1172400 RPM1 interacting protein 4 Chr05 - View
Manihot esculenta Manes.12G046800 Chromosome12 + View
Manihot esculenta Manes.13G048800 Chromosome13 + View
Medicago truncatula Medtr8g012960 RPM1 interacting protein 4 transcript protein chr8 - View
Nicotiana tabacum Nitab4.5_0000045g0460 Pathogenic type III effector avirulence factor Avr cleavage site Nitab4.5_0000045 + View
Olea europaea Oeu023100.1 scaffold2027 + View
Oryza sativa ssp. japonica Os02g0504700 Conserved hypothetical protein. chr02 + View
Petunia axillaris Peaxi162Scf00238g00037 RPM1 interacting protein 4 transcript 2 [Lactuca saligna] Peaxi162Scf00238 + View
Punica granatum PGR083G2795 NC_045133.1 - View
Punica granatum PGR083G1505 NC_045133.1 - View
Punica granatum PGR044G0352 NC_045134.1 + View
Prunus persica Prupe.8G199800 PTHR33159:SF6 - RPM1-INTERACTING PROTEIN 4 Pp08 - View
Populus trichocarpa Potri.002G245400 PTHR33159//PTHR33159:SF6 - FAMILY NOT NAMED // RPM1-INTERACTING PROTEIN 4 Chr02 + View
Phaseolus vulgaris Phvul.010G021200 K13456 - RPM1-interacting protein 4 (RIN4) Chr10 + View
Phaseolus vulgaris Phvul.008G130600 K13456 - RPM1-interacting protein 4 (RIN4) Chr08 + View
Quercus lobata QL09p051777 9 - View
Rosa chinensis RcHm_v2.0_Chr6g0284211 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim01G0254100 chr01 - View
Rhododendron simsii Rhsim13G0047200 chr13 + View
Salix brachista Sabra02G0186700 GWHAAZH00000002 + View
Simmondsia chinensis Sc17g0002180 GWHAASQ00000017 - View
Sechium edule Sed0008860 LG07 + View
Sechium edule Sed0020018 LG09 + View
Solanum lycopersicum Solyc06g083390.4 RPM1-interacting protein 4 (AHRD V3.3 *** A0A1P8SF00_NICBE) SL4.0ch06 - View
Solanum lycopersicum Solyc09g059430.3 RPM1-interacting protein 4 (AHRD V3.3 *** A0A1P8SF00_NICBE) SL4.0ch09 + View
Schrenkiella parvula Sp3g22670 K13456 - RPM1-interacting protein 4 (RIN4) ch3-2 + View
Solanum pennellii Sopen06g034760 Encodes a member of the R protein complex and may represent a virulence target of type III pili effector proteins (virulence factors) from bacterial pathogens, which is guarded by R protein complex (RPM1 and RPS2 proteins). RIN4 physically interacts with RPS2 and RPM1 in vivo. Bacterial avirulence (Avr) effectors AvrB, AvrRpm1, and AvrRpt2 induce a mobility shift in RIN4 and expression of AvrRpt2 induces rapid degradation of RIN4. RIN4 contains 2 sites for AvrRpt2 autocleavage, called RCS1 and RCS2. Overexpression of RIN4 inhibits multiple phenotypes associated with AvrRpt2 function and also inhibits PAMP-induced defense signaling. Attached to the plasma membrane at its carboxyl terminus. Cleaved by AvrRpt2 at two PxFGxW motifs, one releasing a large portion of RIN4 from the plasma membrane and both exposing amino-terminal residues that destabilized the carboxyl-terminal cleavage products by targeting them for N-end ubiquitylation and proteasomal degradation. Major virulence target of the TTSE HopF2Pto. | RPM1 interacting protein 4 (RIN4) | FUNCTIONS IN: protein binding | INVOLVED IN: in 6 processes | LOCATED IN: plasma membrane, membrane | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response | BEST Arabidopsis thaliana protein match is: defense protein-related Spenn-ch06 - View
Solanum tuberosum PGSC0003DMG400020099 RPM1 interacting protein 4 transcript 2 ST4.03ch06 - View
Trochodendron aralioides TAR633G2519 group2 - View
Trochodendron aralioides TAR636G0289 group1 - View
Trochodendron aralioides TAR362G1062 group17 + View
Theobroma cacao Thecc.01G221600 RPM1 interacting protein 4 Chromosome_1 - View
Tarenaya hassleriana THA.LOC104821655 LOW QUALITY PROTEIN: RPM1-interacting protein 4-like NW_010966542.1 + View
Tarenaya hassleriana THA.LOC104808790 RPM1-interacting protein 4-like NW_010964923.1 - View
Tripterygium wilfordii TWI75G1384 NC_052253.1 - View
Tripterygium wilfordii TWI18G0470 NC_052241.1 + View
Tripterygium wilfordii TWI36G0241 NC_052237.1 - View
Utricularia gibba unitig_899.g15413 unitig_899 - View
Vaccinium macrocarpon vmacro14741 Similar to RIN4: RPM1-interacting protein 4 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro02779 Similar to RIN4: RPM1-interacting protein 4 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0331G2000 CM024078.1 + View
Vigna mungo VMungo1383G0545 CM024070.1 + View