Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G12730 LG-10 + View
Acer truncatum Atru.chr8.1131 chr8 + View
Actinidia chinensis Actinidia32402 Lachesis_group10 + View
Actinidia chinensis Actinidia22045 Lachesis_group15 - View
Arabidopsis lyrata AL5G39690 scaffold_5 + View
Arabidopsis lyrata AL4G40400 scaffold_4 - View
Avicennia marina MSTRG.6487 ScioBoG_102839_HRSCAF_103093 + View
Avicennia marina MSTRG.26081 ScioBoG_52287_HRSCAF_52434 - View
Avicennia marina MSTRG.10848 ScioBoG_13798_HRSCAF_13862 + View
Amaranthus hybridus Ah.04g152520 AmaHy_arrow1_Scaffold_4 + View
Amaranthus hybridus Ah.13g075760 E3 ubiquitin-protein ligase RMA3 (EC 2.3.2.27) (Protein RING membrane-anchor 3) (RING-type E3 ubiquitin transferase RMA3) AmaHy_arrow1_Scaffold_13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Y6KX4T PTHR12313//PTHR12313:SF14 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA1-RELATED arahy.Tifrunner.gnm1.Arahy.16 - View
Arabidopsis thaliana AT3G58030 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type%2C conserved site (InterPro:IPR017907)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G42030.1)%3B Has 4227 Blast hits to 4219 proteins in 268 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2446%3B Fungi - 474%3B Plants - 832%3B Viruses - 22%3B Other Eukaryotes - 453 (source: NCBI BLink). RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type%2C conserved site (InterPro:IPR017907)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G42030.1). Chr3 + View
Arabidopsis thaliana AT2G42030 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type%2C conserved site (InterPro:IPR017907)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G58030.4)%3B Has 5667 Blast hits to 5631 proteins in 406 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 3361%3B Fungi - 638%3B Plants - 1015%3B Viruses - 19%3B Other Eukaryotes - 628 (source: NCBI BLink). Chr2 - View
Amborella trichopoda ATR0598G319 AmTr_v1.0_scaffold00024 - View
Brassica carinata BcaC08g44889 ChrC08 + View
Brassica carinata BcaB01g03433 ChrB01 - View
Brassica carinata BcaC02g12454 ChrC02 - View
Brassica carinata BcaC02g09982 ChrC02 + View
Brassica carinata BcaC07g40176 ChrC07 + View
Brassica napus A09p50850 A09 + View
Brassica napus A05p02690 A05 - View
Brassica napus C04p03210 C04 - View
Brassica napus C04p34360 C04 - View
Brassica napus C08p33590 C08 + View
Brassica oleracea BolC4t21959H C4 - View
Brassica oleracea BolC4t24998H C4 - View
Brassica oleracea BolC8t50955H C8 + View
Brassica rapa BraA05t19261Z A05 - View
Brassica rapa BraA07t30036Z A07 + View
Brassica rapa BraA03t11570Z A03 - View
Brassica rapa BraA09t40531Z A09 + View
Beta vulgaris EL10Ac3g06897 PTHR12313//PTHR12313:SF14 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA1-RELATED Chr3_EL10_PGA_scaffold7 - View
Cannabis sativa CANSAT64G1101 NC_044379.1 + View
Cicer arietinum L. Ca_08529_v3 Ca_LG3_v3 + View
Corylus avellana Haze_20006 Similar to RMA3: E3 ubiquitin-protein ligase RMA3 (Arabidopsis thaliana OX%3D3702) 10 + View
Coffea canephora Cc06_g15750 RING/U-box superfamily protein chr6 - View
Citrus clementina Ciclev10013414m.g scaffold_6 + View
Carpinus fangiana Cfa020154 Cfa08 - View
Cardamine hirsuta CARHR137120 RING finger protein Chr4 - View
Cardamine hirsuta CARHR168350 RING finger protein Chr5 + View
Carya illinoinensis CiPaw.10G025900 PTHR12313//PTHR12313:SF14 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA1-RELATED Chr10 - View
Carya illinoinensis CiPaw.09G029500 PTHR12313//PTHR12313:SF14 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA1-RELATED Chr09 - View
Citrullus lanatus ClCG10G017610 RING finger protein CG_Chr10 + View
Cucumis melo MELO3C009615.2 E3 ubiquitin-protein ligase RNF5 chr04 + View
Carica papaya Cpa.g.sc85.55 supercontig_85 + View
Chenopodium quinoa AUR62015353 RMA1H1: E3 ubiquitin-protein ligase RMA1H1 C_Quinoa_Scaffold_2751 - View
Chenopodium quinoa AUR62012018 RMA1H1: E3 ubiquitin-protein ligase RMA1H1 C_Quinoa_Scaffold_2008 - View
Capsella rubella Carub.0005s2488 K10666 - E3 ubiquitin-protein ligase RNF5 (RNF5) scaffold_5 + View
Capsella rubella Carub.0004s2436 K10666 - E3 ubiquitin-protein ligase RNF5 (RNF5) scaffold_4 - View
Cucumis sativus L. CsaV3_3G038710 E3 ubiquitin-protein ligase rma1h1 chr3 - View
Cucumis sativus L. CsaV3_3G032490 E3 ubiquitin-protein like chr3 - View
Daucus carota DCAR_017034 hypothetical protein DCARv2_Chr5 + View
Davidia involucrata Dinv43934 GWHABJS00000020 - View
Davidia involucrata Dinv14315 GWHABJS00000015 - View
Davidia involucrata Dinv24062 GWHABJS00000021 + View
Durio zibethinus Duzib106G0404 NW_019168492.1 + View
Durio zibethinus Duzib128G0738 NW_019168481.1 + View
Durio zibethinus Duzib093G0445 NW_019167937.1 + View
Erigeron canadensis ECA236G3685 Conyza_canadensis_scaffold:3 - View
Erigeron canadensis ECA248G1567 Conyza_canadensis_scaffold:9 + View
Eucalyptus grandis Eucgr.K01846 Chr11 + View
Eucalyptus grandis Eucgr.A02461 Chr01 + View
Erythranthe guttata Migut.K00031 scaffold_11 - View
Eutrema salsugineum Thhalv10005986m.g PTHR12313:SF14 - E3 UBIQUITIN-PROTEIN LIGASE RMA1-RELATED scaffold_19 - View
Fragaria x ananassa FAN14G0395 PTHR12313//PTHR12313:SF14 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA1-RELATED Fvb6-1 + View
Fragaria x ananassa FAN02G3128 PTHR12313//PTHR12313:SF14 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA1-RELATED Fvb6-4 + View
Fragaria x ananassa FAN09G4131 PTHR12313:SF14 - E3 UBIQUITIN-PROTEIN LIGASE RMA1-RELATED Fvb6-2 + View
Fragaria x ananassa FAN05G5176 PTHR12313//PTHR12313:SF14 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA1-RELATED Fvb6-3 + View
Fragaria vesca FvH4_3g09330 PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED Fvb3 + View
Fragaria vesca FvH4_6g22060 PTHR12313//PTHR12313:SF14 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA1-RELATED Fvb6 - View
Gossypium hirsutum Gohir.D11G331600 PTHR12313//PTHR12313:SF14 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA1-RELATED D11 + View
Gossypium hirsutum Gohir.A11G314500 PTHR12313//PTHR12313:SF14 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA1-RELATED A11 + View
Gossypium hirsutum Gohir.D09G124600 PTHR12313//PTHR12313:SF14 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA1-RELATED D09 + View
Gossypium hirsutum Gohir.A09G128600 PTHR12313//PTHR12313:SF14 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA1-RELATED A09 + View
Glycine max Glyma.19G148900 PTHR12313//PTHR12313:SF14 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA1-RELATED Gm19 + View
Glycine max Glyma.03G145700 PTHR12313//PTHR12313:SF14 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA1-RELATED Gm03 + View
Gossypium raimondii Gorai.002G155900 Chr02 - View
Gossypium raimondii Gorai.006G143500 Chr06 + View
Helianthus annuus HanXRQChr05g0132961 Probable RING/U-box superfamily protein HanXRQChr05 + View
Helianthus annuus HanXRQChr01g0009771 Putative zinc finger, RING/FYVE/PHD-type HanXRQChr01 + View
Lupinus albus Lalb_Chr04g0259581 PTHR12313//PTHR12313:SF14 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA1-RELATED Lalb_Chr04 - View
Lupinus albus Lalb_Chr15g0079031 PTHR12313:SF14 - E3 UBIQUITIN-PROTEIN LIGASE RMA1-RELATED Lalb_Chr15 + View
Lupinus albus Lalb_Chr18g0047951 PTHR12313//PTHR12313:SF14 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA1-RELATED Lalb_Chr18 + View
Lotus japonicus Lj1g0012237 PTHR12313//PTHR12313:SF14 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA1-RELATED chr1 + View
Lonicera japonica Lju124C25T1 GWHAAZE00000021 - View
Lonicera japonica Lj2P365T84 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_5_163720 PTHR12313:SF14 - E3 UBIQUITIN-PROTEIN LIGASE RMA1-RELATED Lsat_1_v8_lg_5 + View
Malus domestica MD07G1002400 RING/U-box superfamily protein Chr07 + View
Malus domestica MD12G1055900 RING/U-box superfamily protein Chr12 - View
Manihot esculenta Manes.08G043800 Chromosome08 + View
Manihot esculenta Manes.09G036300 Chromosome09 + View
Medicago truncatula Medtr1g054210 zinc finger, C3HC4 type (RING finger) protein chr1 + View
Medicago truncatula Medtr7g093390 zinc finger, C3HC4 type (RING finger) protein chr7 + View
Nelumbo nucifera Nn2g15705 chr2 + View
Nelumbo nucifera Nn7g35994 chr7 - View
Nicotiana tabacum Nitab4.5_0000105g0180 Zinc finger, RING/FYVE/PHD-type, Zinc finger, RING-type, Zinc finger, RING-type, conserved site Nitab4.5_0000105 + View
Olea europaea Oeu024493.1 scaffold2107 + View
Olea europaea Oeu063871.1 chr2 + View
Petunia axillaris Peaxi162Scf00480g00032 RING/U-box superfamily protein Peaxi162Scf00480 + View
Petunia axillaris Peaxi162Scf00003g00459 RING/U-box superfamily protein Peaxi162Scf00003 + View
Punica granatum PGR004G2023 NC_045131.1 + View
Prunus persica Prupe.2G003800 Pp02 + View
Prunus persica Prupe.7G079200 PTHR12313:SF14 - E3 UBIQUITIN-PROTEIN LIGASE RMA1-RELATED Pp07 + View
Pisum sativum Psat3g068080 Zinc finger + C3HC4 type (RING finger) chr3LG5 - View
Papaver somniferum PSO339G5682 NC_039366.1 - View
Papaver somniferum PSO384G0557 NC_039368.1 - View
Populus trichocarpa Potri.016G058300 PTHR12313//PTHR12313:SF14 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA1-RELATED Chr16 + View
Populus trichocarpa Potri.006G193600 PTHR12313//PTHR12313:SF14 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA1-RELATED Chr06 + View
Phaseolus vulgaris Phvul.001G143400 Chr01 + View
Quercus lobata QL07p024138 7 + View
Rosa chinensis RcHm_v2.0_Chr3g0479381 RcHm_v2.0_Chr3 - View
Rhododendron simsii Rhsim03G0005400 chr03 - View
Striga asiatica SGA_v2.0_scaffold94G28415 scaffold94 - View
Salix brachista Sabra16G0061700 GWHAAZH00000016 + View
Salix brachista Sabra06G0148700 GWHAAZH00000006 + View
Simmondsia chinensis Sc19g0006060 GWHAASQ00000019 + View
Simmondsia chinensis Sc13g0002320 GWHAASQ00000013 + View
Sechium edule Sed0027278 LG12 + View
Solanum lycopersicum Solyc10g078900.3 RING/U-box superfamily protein (AHRD V3.3 *** AT3G58030.4) SL4.0ch10 + View
Schrenkiella parvula Sp4g24260 PTHR12313:SF14 - E3 UBIQUITIN-PROTEIN LIGASE RMA1-RELATED ch4-6 - View
Schrenkiella parvula Sp5g04690 K10666 - E3 ubiquitin-protein ligase RNF5 (RNF5) ch5-1 - View
Solanum pennellii Sopen10g029520 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site , Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein . Spenn-ch10 + View
Solanum pennellii Sopen01g033470 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: cultured cell | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG400011419 Rnf5 ST4.03ch10 - View
Solanum tuberosum PGSC0003DMG400006310 Conserved gene of unknown function ST4.03ch01 - View
Trochodendron aralioides TAR633G0036 group2 - View
Trochodendron aralioides TAR369G0419 group18 + View
Trochodendron aralioides TAR623G1638 group7 - View
Theobroma cacao Thecc.05G173700 RING/U-box superfamily protein Chromosome_5 + View
Tarenaya hassleriana THA.LOC104802629 uncharacterized protein LOC104802629 NW_010960188.1 + View
Tarenaya hassleriana THA.LOC104820181 uncharacterized protein LOC104820181 NW_010960187.1 + View
Tarenaya hassleriana THA.LOC104824479 uncharacterized protein LOC104824479 NW_010966881.1 + View
Trifolium pratense TPR.G18218 Tp57577_TGAC_v2_LG6 + View
Tripterygium wilfordii TWI74G1471 NC_052234.1 - View
Tripterygium wilfordii TWI77G0981 NC_052236.1 + View
Tripterygium wilfordii TWI53G0008 NC_052244.1 + View
Vaccinium macrocarpon vmacro07897 Similar to Rnf5: E3 ubiquitin-protein ligase RNF5 (Rattus norvegicus OX%3D10116) chr2_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1383G3187 CM024070.1 + View