Gene: Solyc10g078900.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc10g078900.3
- Transcript Identifier Solyc10g078900.3.1
- Gene Type Coding gene
- Location SL4.0ch10 : 59671112-59671825 : positive
Gene Family Information
- ID HOM05D000463
- #Genes/#Species 1137/99
- Phylogenetic origin
- ID ORTHO05D004638
- #Genes/#Species 174/79
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc10g078900.3.1
- uniprot A0A3Q7IKB5
- gene_id Solyc10g078900
Descriptions
- Description RING/U-box superfamily protein (AHRD V3.3 *** AT3G58030.4)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006511 | IBA IEA | GOA Database | ubiquitin-dependent protein catabolic process | |
| GO:0006511 | IEA | InterPro | ubiquitin-dependent protein catabolic process | |
| GO:0016567 | IEA | GOA Database | protein ubiquitination | |
| GO:0071712 | IBA | GOA Database | ER-associated misfolded protein catabolic process | |
| GO:0051865 | ISO | PLAZA Integrative Orthology | protein autoubiquitination | AT3G58030 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0061630 | IBA IEA | GOA Database | ubiquitin protein ligase activity | |
| GO:0061630 | IEA | InterPro | ubiquitin protein ligase activity | |
| GO:0044390 | IBA | GOA Database | ubiquitin-like protein conjugating enzyme binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005783 | IEA | GOA Database | endoplasmic reticulum | |
| GO:0005783 | IEA | InterPro | endoplasmic reticulum |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR045103 | E3 ubiquitin-protein ligase RNF5/RNF185-like |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |