Gene: PGSC0003DMG400011419

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400011419
  • Transcript Identifier PGSC0003DMT400029692
  • Gene Type Coding gene
  • Location ST4.03ch10 : 58848752-58850005 : negative

Gene Family Information

  • ID HOM05D000463
  • #Genes/#Species 1137/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37478801
  • id PGSC0003DMG400011419.v4.03
  • uniprot M1ATA2

Descriptions

  • Description Rnf5
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
IBA
IEA
GOA Databaseubiquitin-dependent protein catabolic process
GO:0006511
IEA
InterProubiquitin-dependent protein catabolic process
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0071712
IBA
GOA DatabaseER-associated misfolded protein catabolic process
GO:0051865
ISO
PLAZA Integrative Orthologyprotein autoubiquitination AT3G58030

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061630
IBA
IEA
GOA Databaseubiquitin protein ligase activity
GO:0061630
IEA
InterProubiquitin protein ligase activity
GO:0044390
IBA
GOA Databaseubiquitin-like protein conjugating enzyme binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005783
IEA
GOA Databaseendoplasmic reticulum
GO:0005783
IEA
InterProendoplasmic reticulum

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR001841 Zinc finger, RING-type
IPR045103 E3 ubiquitin-protein ligase RNF5/RNF185-like
Mapman id Description
19.2.2.1.4.3.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-HC-class E3 ligase