Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0050491 unnamed protein product [Coffea canephora] Contig655 - View
CSS0021637 unnamed protein product [Coffea canephora] Chr1 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG9G1220 LG-9 - View
Acer truncatum Atru.chr9.2542 chr9 + View
Acer truncatum Atru.chr6.2360 chr6 + View
Actinidia chinensis Actinidia06005 Lachesis_group11 - View
Actinidia chinensis Actinidia36103 Lachesis_group4 - View
Actinidia chinensis Actinidia19120 Lachesis_group9 - View
Arabidopsis lyrata AL7G49480 scaffold_7 - View
Avicennia marina MSTRG.24032 ScioBoG_3895_HRSCAF_3912 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.DBZB80 K06617 - raffinose synthase (E2.4.1.82) arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SCX26U K06617 - raffinose synthase (E2.4.1.82) arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.B3XDAM K06617 - raffinose synthase (E2.4.1.82) arahy.Tifrunner.gnm1.Arahy.05 - View
Arabidopsis thaliana AT5G40390 Raffinose synthase family protein Encodes a protein which might be involved in the formation of verbascose. A T-DNA insertion mutant was shown to have a decreased amount of verbascose (as well as mannitol) whereas the levels of raffinose and stachyose remained unchanged. seed imbibition 1-like (SIP1)%3B FUNCTIONS IN: hydrolase activity%2C hydrolyzing O-glycosyl compounds%2C galactinol-sucrose galactosyltransferase activity%3B INVOLVED IN: mannitol biosynthetic process%2C raffinose family oligosaccharide biosynthetic process%2C response to water deprivation%2C sucrose biosynthetic process%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Glycoside hydrolase%2C catalytic core (InterPro:IPR017853)%2C Raffinose synthase (InterPro:IPR008811)%3B BEST Arabidopsis thaliana protein match is: Raffinose synthase family protein (TAIR:AT5G20250.4)%3B Has 508 Blast hits to 470 proteins in 135 species: Archae - 27%3B Bacteria - 74%3B Metazoa - 0%3B Fungi - 82%3B Plants - 317%3B Viruses - 0%3B Other Eukaryotes - 8 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaB06g27499 ChrB06 + View
Brassica napus A04p13430 A04 + View
Brassica napus C04p47160 C04 + View
Brassica oleracea BolC4t26314H C4 + View
Brassica rapa BraA04t17001Z A04 + View
Capsicum annuum CAN.G473.1 PGAv.1.6.scaffold473 + View
Cannabis sativa CANSAT64G2129 NC_044379.1 - View
Cicer arietinum L. Ca_16150_v3 Ca_LG5_v3 - View
Cicer arietinum L. Ca_04158_v3 Ca_LG2_v3 - View
Corylus avellana Haze_07556 Similar to RFS: Galactinol--sucrose galactosyltransferase (Pisum sativum OX%3D3888) 4 + View
Corylus avellana Haze_14725 Similar to RFS5: Probable galactinol--sucrose galactosyltransferase 5 (Arabidopsis thaliana OX%3D3702) 5 + View
Coffea canephora Cc07_g01840 Galactinol--sucrose galactosyltransferase chr7 - View
Citrus clementina Ciclev10014333m.g scaffold_2 + View
Citrus clementina Ciclev10018941m.g scaffold_3 + View
Carpinus fangiana Cfa007383 Cfa03 - View
Cardamine hirsuta CARHR261630 Stachyose synthase, putative Chr8 - View
Carya illinoinensis CiPaw.03G042100 PTHR31268//PTHR31268:SF2 - FAMILY NOT NAMED // GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 5-RELATED Chr03 + View
Carya illinoinensis CiPaw.11G022300 PTHR31268//PTHR31268:SF2 - FAMILY NOT NAMED // GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 5-RELATED Chr11 - View
Carya illinoinensis CiPaw.04G027700 PTHR31268//PTHR31268:SF2 - FAMILY NOT NAMED // GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 5-RELATED Chr04 + View
Citrullus lanatus ClCG10G013980 Stachyose synthase, putative CG_Chr10 - View
Cucumis melo MELO3C009979.2 Raffinose synthase chr04 - View
Carica papaya Cpa.g.sc108.53 supercontig_108 + View
Capsella rubella Carub.0007s3521 PTHR31268//PTHR31268:SF2 - FAMILY NOT NAMED // GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 5-RELATED scaffold_7 - View
Cucumis sativus L. CsaV3_1G008720 galactinol--sucrose galactosyltransferase-like chr1 + View
Cucumis sativus L. CsaV3_3G042690 Raffinose synthase chr3 + View
Daucus carota DCAR_011247 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv20617 GWHABJS00000006 + View
Davidia involucrata Dinv33452 GWHABJS00000014 - View
Durio zibethinus Duzib264G1194 NW_019167960.1 - View
Durio zibethinus Duzib147G0050 NW_019168470.1 - View
Erigeron canadensis ECA246G4686 Conyza_canadensis_scaffold:8 + View
Eucalyptus grandis Eucgr.K02813 Chr11 - View
Eucalyptus grandis Eucgr.I01755 Chr09 - View
Eucalyptus grandis Eucgr.J02233 Chr10 + View
Erythranthe guttata Migut.K01390 scaffold_11 + View
Erythranthe guttata Migut.H00086 scaffold_8 - View
Eutrema salsugineum Thhalv10027649m.g PTHR31268:SF2 - GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 5-RELATED scaffold_14 - View
Fragaria x ananassa FAN04G1684 2.4.1.82 - Galactinol--sucrose galactosyltransferase / Raffinose synthase Fvb5-4 + View
Fragaria x ananassa FAN05G0436 2.4.1.82 - Galactinol--sucrose galactosyltransferase / Raffinose synthase Fvb6-3 + View
Fragaria x ananassa FAN02G0245 2.4.1.82 - Galactinol--sucrose galactosyltransferase / Raffinose synthase Fvb6-4 - View
Fragaria x ananassa FAN09G3763 2.4.1.82 - Galactinol--sucrose galactosyltransferase / Raffinose synthase Fvb6-2 + View
Fragaria vesca FvH4_6g51361 2.4.1.82 - Galactinol--sucrose galactosyltransferase / Raffinose synthase Fvb6 - View
Gossypium hirsutum Gohir.A05G357500 K06617 - raffinose synthase (E2.4.1.82) A05 - View
Gossypium hirsutum Gohir.A09G028700 K06617 - raffinose synthase (E2.4.1.82) A09 - View
Gossypium hirsutum Gohir.D04G056600 K06617 - raffinose synthase (E2.4.1.82) D04 + View
Gossypium hirsutum Gohir.D09G028250 PTHR31268//PTHR31268:SF2 - FAMILY NOT NAMED // GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 5-RELATED D09 - View
Glycine max Glyma.05G040300 PTHR31268//PTHR31268:SF2 - FAMILY NOT NAMED // GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 5-RELATED Gm05 + View
Glycine max Glyma.05G003900 PTHR31268//PTHR31268:SF2 - FAMILY NOT NAMED // GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 5-RELATED Gm05 + View
Glycine max Glyma.06G179200 PTHR31268//PTHR31268:SF2 - FAMILY NOT NAMED // GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 5-RELATED Gm06 - View
Glycine max Glyma.19G004400 PTHR31268//PTHR31268:SF2 - FAMILY NOT NAMED // GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 5-RELATED Gm19 - View
Gossypium raimondii Gorai.012G063500 Chr12 + View
Gossypium raimondii Gorai.006G032900 Chr06 - View
Helianthus annuus HanXRQChr17g0548561 Probable raffinose synthase family protein HanXRQChr17 - View
Hydrangea macrophylla Hma1.2p1_0046F.1_g026900 Hma1.2p1_0046F.1 + View
Lupinus albus Lalb_Chr06g0175831 2.4.1.82 - Galactinol--sucrose galactosyltransferase / Raffinose synthase Lalb_Chr06 - View
Lotus japonicus Lj4g0007069 PTHR31268//PTHR31268:SF2 - FAMILY NOT NAMED // GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 5-RELATED chr4 + View
Lotus japonicus Lj2g0002756 PTHR31268//PTHR31268:SF2 - FAMILY NOT NAMED // GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 5-RELATED chr2 - View
Lonicera japonica Lj5A128G59 GWHAAZE00000005 + View
Lonicera japonica Lj7C597T15 GWHAAZE00000007 + View
Magnolia biondii MBI16_g23857_MAGBIO AED:0.06 Chr16 - View
Magnolia biondii MBI10_g00727_MAGBIO AED:0.14 Chr10 + View
Malus domestica MD06G1169800 Raffinose synthase family protein Chr06 - View
Malus domestica MD17G1030100 Raffinose synthase family protein Chr17 - View
Malus domestica MD14G1175300 Raffinose synthase family protein Chr14 - View
Manihot esculenta Manes.06G108300 Chromosome06 + View
Manihot esculenta Manes.17G115500 Chromosome17 + View
Manihot esculenta Manes.14G062500 Chromosome14 - View
Medicago truncatula Medtr6g004880 raffinose synthase or seed inhibition protein chr6 + View
Medicago truncatula Medtr3g077280 galactinol-raffinose galactosyltransferase chr3 - View
Medicago truncatula Medtr4g105250 raffinose synthase or seed inhibition protein chr4 - View
Nelumbo nucifera Nn4g22662 chr4 - View
Nicotiana tabacum Nitab4.5_0002682g0060 Glycoside hydrolase, superfamily, Aldolase-type TIM barrel, Glycosyl hydrolases 36 Nitab4.5_0002682 + View
Olea europaea Oeu054617.1 chr10 + View
Punica granatum PGR142G3965 NC_045128.1 + View
Prunus persica Prupe.5G169000 PTHR31268:SF2 - GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 5-RELATED Pp05 - View
Prunus persica Prupe.3G289900 PTHR31268:SF2 - GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 5-RELATED Pp03 + View
Pisum sativum Psat1g055560 Raffinose synthase or seed imbibition protein Sip1 chr1LG6 + View
Populus trichocarpa Potri.T124908 PTHR31268//PTHR31268:SF2 - FAMILY NOT NAMED // GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 5-RELATED scaffold_820 + View
Phaseolus vulgaris Phvul.009G175400 PTHR31268:SF2 - GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 5-RELATED Chr09 - View
Phaseolus vulgaris Phvul.004G007100 PTHR31268:SF2 - GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 5-RELATED Chr04 + View
Quercus lobata QL02p075137 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr2g0173061 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim10G0018300 chr10 - View
Striga asiatica SGA_v2.0_scaffold481G52315 scaffold481 - View
Salvia bowleyana SalBow1G0522 GWHASIU00000001 - View
Simmondsia chinensis Sc16g0003230 GWHAASQ00000016 - View
Sechium edule Sed0014979 LG06 - View
Solanum lycopersicum Solyc02g086530.4 Raffinose synthase (AHRD V3.3 *** G5DF09_9LAMI) SL4.0ch02 - View
Schrenkiella parvula Sp7g01530 PTHR31268:SF2 - GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 5-RELATED ch7-1 - View
Solanum pennellii Sopen02g031260 Raffinose synthase, Encodes a protein which might be involved in the formation of verbascose. A T-DNA insertion mutant was shown to have a decreased amount of verbascose (as well as mannitol) whereas the levels of raffinose and stachyose remained unchanged. | seed imbibition 1-like (SIP1) | FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, galactinol-sucrose galactosyltransferase activity | INVOLVED IN: mannitol biosynthetic process, raffinose family oligosaccharide biosynthetic process, response to water deprivation, sucrose biosynthetic process | LOCATED IN: chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core , Raffinose synthase | BEST Arabidopsis thaliana protein match is: Raffinose synthase family protein Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400000513 Stachyose synthase ST4.03ch02 + View
Trochodendron aralioides TAR629G3000 group0 - View
Trochodendron aralioides TAR374G0713 group12 + View
Theobroma cacao Thecc.04G015400 Raffinose synthase family protein Chromosome_4 + View
Tarenaya hassleriana THA.LOC104805378 probable galactinol--sucrose galactosyltransferase 5 NW_010961290.1 - View
Trifolium pratense TPR.G37482 Tp57577_TGAC_v2_LG5 - View
Tripterygium wilfordii TWI39G0007 NC_052250.1 + View
Tripterygium wilfordii TWI56G0365 NC_052242.1 + View
Utricularia gibba unitig_0.g1602 unitig_0 - View
Vaccinium macrocarpon vmacro05855 Similar to RFS: Galactinol--sucrose galactosyltransferase (Pisum sativum OX%3D3888) chr12_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1309G1870 CM024072.1 + View
Vitis vinifera GSVIVG01032425001 chr14 - View