Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0023075 PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic, partial [Eucalyptus grandis] Contig930 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Actinidia chinensis Actinidia32775 Lachesis_group14 - View
Actinidia chinensis Actinidia01263 Lachesis_group18 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.KX9QRC PTHR10381:SF19 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 1 arahy.Tifrunner.gnm1.Arahy.09 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WLNU9H PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.15 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.379I7Q PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.05 - View
Arabidopsis thaliana AT5G45390 CLP protease P4 One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001). CLP protease P4 (CLPP4)%3B FUNCTIONS IN: serine-type endopeptidase activity%3B INVOLVED IN: chloroplast organization%2C regulation of timing of transition from vegetative to reproductive phase%3B LOCATED IN: in 7 components%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Peptidase S14%2C ClpP%2C active site (InterPro:IPR018215)%2C Peptidase S14%2C ClpP (InterPro:IPR001907)%3B BEST Arabidopsis thaliana protein match is: CLP protease proteolytic subunit 3 (TAIR:AT1G66670.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 + View
Amborella trichopoda ATR0829G127 AmTr_v1.0_scaffold00048 + View
Brassica napus C09p68720 C09 + View
Brassica oleracea BolC9t59619H C9 + View
Cicer arietinum L. Ca_25101_v3 Ca_LG8_v3 + View
Corylus avellana Haze_08065 Similar to CLPP4: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic (Arabidopsis thaliana OX%3D3702) 4 + View
Coffea canephora Cc08_g05030 Putative ATP-dependent Clp protease proteolytic subunit 3, chloroplastic chr8 + View
Carpinus fangiana Cfa012592 Cfa05 - View
Cardamine hirsuta CARHR176680 ATP-dependent Clp protease proteolytic subunit Chr6 - View
Carya illinoinensis CiPaw.11G103300 PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED Chr11 - View
Carya illinoinensis CiPaw.12G071900 PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED Chr12 - View
Citrullus lanatus ClCG10G001000 ATP-dependent Clp protease proteolytic subunit CG_Chr10 + View
Cucumis melo MELO3C013793.2 ATP-dependent Clp protease proteolytic subunit chr06 + View
Capsella rubella Carub.0008s0272 PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED scaffold_8 - View
Cucumis sativus L. CsaV3_3G001040 ATP-dependent Clp protease proteolytic subunit chr3 + View
Daucus carota DCAR_004238 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv22875 GWHABJS00000017 - View
Erythranthe guttata Migut.E01350 scaffold_5 - View
Eutrema salsugineum Thhalv10000978m.g PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED scaffold_20 + View
Gossypium hirsutum Gohir.A12G222000 PTHR10381:SF15 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT-RELATED PROTEIN 2, CHLOROPLASTIC A12 + View
Glycine max Glyma.09G213800 PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED Gm09 - View
Glycine max Glyma.01G149700 PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED Gm01 - View
Gossypium raimondii Gorai.008G240600 Chr08 + View
Lupinus albus Lalb_Chr05g0215431 PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED Lalb_Chr05 + View
Lupinus albus Lalb_Chr16g0380731 PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED Lalb_Chr16 + View
Lotus japonicus Lj2g0004897 PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED chr2 + View
Lonicera japonica Lj7A143G22 GWHAAZE00000007 + View
Manihot esculenta Manes.17G003300 Chromosome17 - View
Medicago truncatula Medtr5g026840 ATP-dependent Clp protease proteolytic protein chr5 + View
Pisum sativum Psat2g142240 Clp protease chr2LG1 - View
Papaver somniferum PSO063G0519 NC_039364.1 + View
Populus trichocarpa Potri.003G103300 PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED Chr03 - View
Populus trichocarpa Potri.001G130601 PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED Chr01 + View
Phaseolus vulgaris Phvul.002G128500 PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED Chr02 + View
Rhododendron simsii Rhsim11G0024800 chr11 + View
Salvia bowleyana SalBow8G1855 GWHASIU00000004 + View
Salix brachista Sabra01G0101000 GWHAAZH00000001 + View
Salix brachista Sabra03G0070500 GWHAAZH00000003 - View
Sechium edule Sed0026890 LG04 - View
Solanum lycopersicum Solyc08g075750.4 ATP-dependent Clp protease proteolytic subunit (AHRD V3.3 *** A0A2G3DD48_CAPCH) SL4.0ch08 + View
Solanum pennellii Sopen08g024400 One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001). | CLP protease P4 (CLPP4) | FUNCTIONS IN: serine-type endopeptidase activity | INVOLVED IN: chloroplast organization, regulation of timing of transition from vegetative to reproductive phase | LOCATED IN: in 7 components | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP, active site , Peptidase S14, ClpP | BEST Arabidopsis thaliana protein match is: CLP protease proteolytic subunit 3 Spenn-ch08 + View
Solanum tuberosum PGSC0003DMG400030851 ATP-dependent Clp protease proteolytic subunit ST4.03ch08 + View
Trochodendron aralioides TAR375G0187 group15 + View
Vaccinium macrocarpon vmacro00061 Similar to CLPP4: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1215G1872 CM024074.1 + View