Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr1.3523 chr1 + View
Actinidia chinensis Actinidia32097 Lachesis_group27 + View
Actinidia chinensis Actinidia21716 Lachesis_group1 - View
Avicennia marina MSTRG.4752 ScioBoG_102837_HRSCAF_103074 + View
Amaranthus hybridus Ah.01g022080 AmaHy_arrow1_Scaffold_1 + View
Amaranthus hybridus Ah.01g005800 Protein PAF1 homolog (Protein EARLY FLOWERING 7) (Protein VERNALIZATION INDEPENDENCE 2) AmaHy_arrow1_Scaffold_1 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.R367CR K15174 - RNA polymerase II-associated factor 1 (PAF1) arahy.Tifrunner.gnm1.Arahy.09 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.VUMD9N K15174 - RNA polymerase II-associated factor 1 (PAF1) arahy.Tifrunner.gnm1.Arahy.18 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.YYV7TY PTHR23188//PTHR23188:SF12 - FAMILY NOT NAMED // RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG arahy.Tifrunner.gnm1.Arahy.07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.1M6YYJ K15174 - RNA polymerase II-associated factor 1 (PAF1) arahy.Tifrunner.gnm1.Arahy.19 + View
Beta vulgaris EL10Ac9g21206 K15174 - RNA polymerase II-associated factor 1 (PAF1) Chr9_EL10_PGA_scaffold8 - View
Capsicum annuum CAN.G1143.11 PGAv.1.6.scaffold1143 + View
Cannabis sativa CANSAT56G0983 NC_044371.1 + View
Cicer arietinum L. Ca_23262_v3 Ca_LG7_v3 + View
Corylus avellana Haze_15847 Similar to VIP2: Protein PAF1 homolog (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc04_g02560 Putative uncharacterized protein chr4 - View
Citrus clementina Ciclev10025066m.g scaffold_7 - View
Carya illinoinensis CiPaw.02G145800 K15174 - RNA polymerase II-associated factor 1 (PAF1) Chr02 - View
Citrullus lanatus ClCG09G000200 Hydroxyproline-rich glycoprotein CG_Chr09 + View
Cucumis melo MELO3C024438.2 RNA polymerase II-associated, Paf1 chr01 - View
Corchorus olitorius COL.COLO4_30512 RNA polymerase II-associated%2C Paf1 AWUE01020743.1 + View
Carica papaya Cpa.g.sc109.1 supercontig_109 + View
Chenopodium quinoa AUR62031914 VIP2: Protein PAF1 homolog C_Quinoa_Scaffold_1810 + View
Chenopodium quinoa AUR62022205 VIP2: Protein PAF1 homolog C_Quinoa_Scaffold_4319 + View
Cucumis sativus L. CsaV3_7G035280 RNA polymerase II-associated factor 1 like chr7 - View
Daucus carota DCAR_016188 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv30436 GWHABJS00000019 + View
Durio zibethinus Duzib160G0376 NW_019168015.1 + View
Durio zibethinus Duzib192G0488 NW_019168037.1 - View
Durio zibethinus Duzib235G0505 NW_019167982.1 + View
Eucalyptus grandis Eucgr.F03078 Chr06 + View
Erythranthe guttata Migut.I00890 scaffold_9 - View
Erythranthe guttata Migut.D00991 scaffold_4 - View
Eutrema salsugineum Thhalv10018561m.g K15174 - RNA polymerase II-associated factor 1 (PAF1) scaffold_9 + View
Fragaria x ananassa FAN02G3590 PTHR23188:SF12 - RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG Fvb6-4 + View
Fragaria x ananassa FAN05G1466 K15174 - RNA polymerase II-associated factor 1 (PAF1) Fvb6-3 - View
Fragaria x ananassa FAN09G0199 PTHR23188:SF12 - RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG Fvb6-2 - View
Fragaria x ananassa FAN14G4508 K15174 - RNA polymerase II-associated factor 1 (PAF1) Fvb6-1 - View
Fragaria vesca FvH4_6g32381 K15174 - RNA polymerase II-associated factor 1 (PAF1) Fvb6 + View
Gossypium hirsutum Gohir.D03G057900 K15174 - RNA polymerase II-associated factor 1 (PAF1) D03 - View
Gossypium hirsutum Gohir.A02G117400 PTHR23188//PTHR23188:SF12 - FAMILY NOT NAMED // RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG A02 - View
Glycine max Glyma.07G015500 K15174 - RNA polymerase II-associated factor 1 (PAF1) Gm07 - View
Glycine max Glyma.08G201000 K15174 - RNA polymerase II-associated factor 1 (PAF1) Gm08 - View
Gossypium raimondii Gorai.003G061700 Chr03 - View
Helianthus annuus HanXRQChr09g0276241 Putative RNA polymerase II associated factor Paf1 HanXRQChr09 + View
Lupinus albus Lalb_Chr04g0262971 K15174 - RNA polymerase II-associated factor 1 (PAF1) Lalb_Chr04 + View
Lupinus albus Lalb_Chr22g0351551 K15174 - RNA polymerase II-associated factor 1 (PAF1) Lalb_Chr22 + View
Lotus japonicus Lj3g0013010 K15174 - RNA polymerase II-associated factor 1 (PAF1) chr3 - View
Lonicera japonica Lj5C53T3 GWHAAZE00000005 - View
Lonicera japonica Lj9C512T10 GWHAAZE00000009 + View
Lactuca sativa Lsat_1_v5_gn_4_97461 K15174 - RNA polymerase II-associated factor 1 (PAF1) Lsat_1_v8_lg_4 + View
Malus domestica MD09G1202900 RNA polymerase II-associated factor 1 homolog Chr09 - View
Malus domestica MD17G1184000 hydroxyproline-rich glycoprotein family protein Chr17 - View
Manihot esculenta Manes.11G033651 Chromosome11 - View
Manihot esculenta Manes.04G134200 Chromosome04 + View
Medicago truncatula Medtr8g014460 Paf1 complex component chr8 + View
Olea europaea Oeu023599.1 chr18 - View
Olea europaea Oeu026780.1 chr10 - View
Petunia axillaris Peaxi162Scf00038g01028 Hydroxyproline-rich glycoprotein family protein isoform 2 Peaxi162Scf00038 + View
Punica granatum PGR102G0015 NC_045129.1 + View
Prunus persica Prupe.3G059100 K15174 - RNA polymerase II-associated factor 1 (PAF1) Pp03 - View
Populus trichocarpa Potri.003G048900 K15174 - RNA polymerase II-associated factor 1 (PAF1) Chr03 - View
Populus trichocarpa Potri.001G190000 K15174 - RNA polymerase II-associated factor 1 (PAF1) Chr01 + View
Phaseolus vulgaris Phvul.010G145300 K15174 - RNA polymerase II-associated factor 1 (PAF1) Chr10 - View
Quercus lobata QL05p020046 5 - View
Rosa chinensis RcHm_v2.0_Chr2g0140531 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim08G0227500 chr08 + View
Striga asiatica SGA_v2.0_scaffold4G02026 scaffold4 + View
Salvia bowleyana SalBow7G4596 GWHASIU00000005 + View
Salix brachista Sabra01G0151600 GWHAAZH00000001 + View
Simmondsia chinensis Sc15g0001880 GWHAASQ00000015 - View
Sechium edule Sed0027607 LG09 + View
Sapria himalayana SHI11095 scaffold13_12996478 - View
Solanum lycopersicum Solyc03g121020.3 RNA polymerase II associated factor Paf1 (AHRD V3.3 *** A0A2U1KW07_ARTAN) SL4.0ch03 + View
Schrenkiella parvula Sp5g36040 K15174 - RNA polymerase II-associated factor 1 (PAF1) ch5-7 - View
Solanum pennellii Sopen03g039850 Encodes a PAF1 homolog that is involved in the control of flowering time by elevating FLC expression to a level that creates the vernalization-responsive, winter-annual habit. Yeast PAF1 is a component of a five-member complex that associates with RNA pol II and is thought to regulate gene expression by recruiting SET1 (a histone 3 Lys 4 (H3-K4) methyl transferase) to the initially transcribed (5) regions of target chromatin. Mutants display reduced H3-K4 methylation in both FLC and FLM chromatin. | EARLY FLOWERING 7 (ELF7) | CONTAINS InterPro DOMAIN/s: RNA polymerase II-associated, Paf1 Spenn-ch03 + View
Selenicereus undatus Hund07600 Scaffold_33676 + View
Theobroma cacao Thecc.06G100000 Hydroxyproline-rich glycoprotein family protein Chromosome_6 + View
Tripterygium wilfordii TWI12G0488 NC_052243.1 + View
Tripterygium wilfordii TWI75G0851 NC_052253.1 - View
Vaccinium macrocarpon vmacro18853 Similar to VIP2: Protein PAF1 homolog (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0331G0134 CM024078.1 + View
Vitis vinifera GSVIVG01016983001 chr9 - View