Gene: COL.COLO4_30512
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_30512
- Transcript Identifier COL.rna29228
- Gene Type Coding gene
- Location AWUE01020743.1 : 29539-33891 : positive
Gene Family Information
- ID HOM05D005013
- #Genes/#Species 149/96
- Phylogenetic origin
- ID ORTHO05D006005
- #Genes/#Species 149/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna29228
- GenBank OMO66541.1
- id gene30484
- gene_name COLO4_30512
- uniprot A0A1R3H878
Descriptions
- Description RNA polymerase II-associated, Paf1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006368 | IEA | GOA Database | transcription elongation from RNA polymerase II promoter | |
| GO:0006368 | IEA | InterPro | transcription elongation from RNA polymerase II promoter | |
| GO:0016570 | IEA | GOA Database | histone modification | |
| GO:0016570 | IEA | InterPro | histone modification | |
| GO:0016571 | ISO | PLAZA Integrative Orthology | histone methylation | AT1G79730 |
| GO:0009910 | ISO | PLAZA Integrative Orthology | negative regulation of flower development | AT1G79730 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0016593 | IEA | GOA Database | Cdc73/Paf1 complex | |
| GO:0016593 | IEA | InterPro | Cdc73/Paf1 complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007133 | RNA polymerase II associated factor Paf1 |
| Mapman id | Description |
|---|---|
| 15.3.5.1.1 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.PAF1C transcription initiation and elongation complex.component ELF7/PAF1 |