Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G2040 LG-3 + View
Actinidia chinensis Actinidia11232 Lachesis_group21 + View
Arabidopsis lyrata AL6G12110 scaffold_6 + View
Arabidopsis lyrata AL3G20820 scaffold_3 + View
Avicennia marina MSTRG.19131 ScioBoG_25048_HRSCAF_25167 + View
Avicennia marina MSTRG.26732 ScioBoG_52287_HRSCAF_52434 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.NI5BDM PTHR12802:SF52 - PROTEIN REVEILLE 4-RELATED arahy.Tifrunner.gnm1.Arahy.06 - View
Arabidopsis thaliana AT5G02840 LHY/CCA1-like 1 CCA1 and LHY colocalize in the nucleus and form heterodimers in vivo. CCA1 and LHY function synergistically in regulating circadian rhythms of Arabidopsis. LHY/CCA1-like 1 (LCL1)%3B CONTAINS InterPro DOMAIN/s: SANT%2C DNA-binding (InterPro:IPR001005)%2C Homeodomain-like (InterPro:IPR009057)%2C Myb%2C DNA-binding (InterPro:IPR014778)%2C HTH transcriptional regulator%2C Myb-type%2C DNA-binding (InterPro:IPR017930)%2C Myb-like DNA-binding domain%2C SHAQKYF class (InterPro:IPR006447)%3B BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G09600.2)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). LHY/CCA1-like 1 (LCL1)%3B CONTAINS InterPro DOMAIN/s: SANT%2C DNA-binding (InterPro:IPR001005)%2C Homeodomain-like (InterPro:IPR009057)%2C Myb%2C DNA-binding (InterPro:IPR014778)%2C HTH transcriptional regulator%2C Myb-type%2C DNA-binding (InterPro:IPR017930)%2C Myb-like DNA-binding domain%2C SHAQKYF class (InterPro:IPR006447)%3B BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G09600.1)%3B Has 1341 Blast hits to 1331 proteins in 115 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 91%3B Fungi - 0%3B Plants - 1058%3B Viruses - 0%3B Other Eukaryotes - 192 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaB01g05873 ChrB01 - View
Brassica carinata BcaC06g32014 ChrC06 + View
Brassica rapa BraA10t45325Z A10 - View
Beta vulgaris EL10Ac7g17333 PTHR12802//PTHR12802:SF52 - SWI/SNF COMPLEX-RELATED // PROTEIN REVEILLE 4-RELATED Chr7_EL10_PGA_scaffold5 - View
Coffea canephora Cc06_g03390 Transcription factor ASG4 chr6 - View
Ceratophyllum demersum CDE09G0113 7 - View
Ceratophyllum demersum CDE02G0386 1 + View
Ceratophyllum demersum CDE04G1505 2 + View
Cardamine hirsuta CARHR210490 MYB transcription factor Chr6 - View
Cucumis melo MELO3C009305.2 protein REVEILLE 8-like isoform X1 chr04 - View
Capsella rubella Carub.0006s0164 PTHR12802:SF52 - PROTEIN REVEILLE 4-RELATED scaffold_6 + View
Cucumis sativus L. CsaV3_3G035450 protein REVEILLE 8-like isoform X3 chr3 + View
Daucus carota DCAR_020870 hypothetical protein DCARv2_Chr6 - View
Durio zibethinus Duzib093G2183 NW_019167937.1 - View
Erigeron canadensis ECA238G3765 Conyza_canadensis_scaffold:6 + View
Erythranthe guttata Migut.J00406 scaffold_10 + View
Eutrema salsugineum Thhalv10014025m.g PTHR12802:SF52 - PROTEIN REVEILLE 4-RELATED scaffold_2 + View
Fragaria vesca FvH4_6g15160 PTHR12802//PTHR12802:SF52 - SWI/SNF COMPLEX-RELATED // PROTEIN REVEILLE 4-RELATED Fvb6 + View
Gossypium hirsutum Gohir.D09G156500 PTHR12802:SF52 - PROTEIN REVEILLE 4-RELATED D09 + View
Gossypium hirsutum Gohir.A09G160800 PTHR12802:SF52 - PROTEIN REVEILLE 4-RELATED A09 + View
Glycine max Glyma.13G136300 PTHR12802:SF52 - PROTEIN REVEILLE 4-RELATED Gm13 + View
Glycine max Glyma.03G177300 PTHR12802:SF52 - PROTEIN REVEILLE 4-RELATED Gm03 + View
Gossypium raimondii Gorai.006G178000 Chr06 + View
Hydrangea macrophylla Hma1.2p1_0111F.1_g053760 Hma1.2p1_0111F.1 + View
Lupinus albus Lalb_Chr21g0314601 PTHR12802//PTHR12802:SF52 - SWI/SNF COMPLEX-RELATED // PROTEIN REVEILLE 4-RELATED Lalb_Chr21 + View
Lonicera japonica Lj2A106G31 GWHAAZE00000002 + View
Medicago truncatula Medtr1g067000 myb transcription factor chr1 - View
Nicotiana tabacum Nitab4.5_0000202g0460 Myb domain, plants, Myb domain, SANT/Myb domain, Homeodomain-like Nitab4.5_0000202 + View
Punica granatum PGR004G1473 NC_045131.1 - View
Phaseolus vulgaris Phvul.007G162800 Chr07 + View
Phaseolus vulgaris Phvul.001G174200 PTHR12802:SF52 - PROTEIN REVEILLE 4-RELATED Chr01 + View
Quercus lobata QL07p045490 7 - View
Salvia bowleyana SalBow3G1409 GWHASIU00000006 - View
Salix brachista Sabra06G0104400 GWHAAZH00000006 + View
Salix brachista Sabra16G0090900 GWHAAZH00000016 - View
Simmondsia chinensis Sc01g0003640 GWHAASQ00000001 - View
Sechium edule Sed0013789 LG04 + View
Sechium edule Sed0022203 LG02 + View
Solanum lycopersicum Solyc10g084370.3 Homeodomain-like superfamily protein (AHRD V3.3 *** A0A1I9LS15_ARATH) SL4.0ch10 - View
Schrenkiella parvula Sp6g39740 PTHR12802//PTHR12802:SF52 - SWI/SNF COMPLEX-RELATED // PROTEIN REVEILLE 4-RELATED ch6-6 - View
Solanum pennellii Sopen10g033810 Homeodomain-like superfamily protein | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: in 9 processes | LOCATED IN: chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: SANT, DNA-binding , Homeodomain-like , Myb, DNA-binding , HTH transcriptional regulator, Myb-type, DNA-binding , Myb-like DNA-binding domain, SHAQKYF class | BEST Arabidopsis thaliana protein match is: LHY/CCA1-like 1 Spenn-ch10 - View
Solanum tuberosum PGSC0003DMG400011048 MYB transcription factor ST4.03ch10 + View
Selenicereus undatus Hund20147 Scaffold_33673 - View
Tarenaya hassleriana THA.LOC104816664 protein REVEILLE 8-like isoform X1 NW_010965775.1 + View
Vaccinium macrocarpon vmacro20067 Similar to RVE8: Protein REVEILLE 8 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G2496 CM024070.1 + View