Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0023529 PREDICTED: THO complex subunit 4A [Prunus mume] Contig1318 + View
CSS0023231 PREDICTED: THO complex subunit 4A [Prunus mume] Chr4 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G22270 LG-1 + View
Acer truncatum Atru.chr8.1942 chr8 - View
Actinidia chinensis Actinidia02965 Lachesis_group22 - View
Actinidia chinensis Actinidia26446 Lachesis_group17 + View
Arabidopsis lyrata AL6G11790 scaffold_6 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.F8UVUT K12881 - THO complex subunit 4 (THOC4, ALY) arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.GS5YLT K12881 - THO complex subunit 4 (THOC4, ALY) arahy.Tifrunner.gnm1.Arahy.08 - View
Arabidopsis thaliana AT5G02530 RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G59950.1)%3B Has 12422 Blast hits to 9446 proteins in 764 species: Archae - 2%3B Bacteria - 1351%3B Metazoa - 5150%3B Fungi - 2013%3B Plants - 2049%3B Viruses - 53%3B Other Eukaryotes - 1804 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC06g31995 ChrC06 - View
Brassica carinata BcaB01g06171 ChrB01 - View
Brassica napus C03p01040 C03 - View
Brassica napus C09p74070 C09 + View
Brassica napus A03p00790 A03 - View
Brassica napus A10p33110 A10 + View
Brassica oleracea BolC3t12665H C3 - View
Brassica oleracea BolC9t60138H C9 + View
Brassica rapa BraA03t09462Z A03 - View
Brassica rapa BraA10t45344Z A10 + View
Corylus avellana Haze_24048 Similar to ALY1: THO complex subunit 4A (Arabidopsis thaliana OX%3D3702) 6 + View
Citrus clementina Ciclev10012530m.g scaffold_6 - View
Ceratophyllum demersum CDE02G2164 1 - View
Ceratophyllum demersum CDE07G1326 5 + View
Ceratophyllum demersum CDE08G1666 6 + View
Ceratophyllum demersum CDE04G2525 2 - View
Carya illinoinensis CiPaw.02G182200 K12881 - THO complex subunit 4 (THOC4, ALY) Chr02 + View
Carya illinoinensis CiPaw.14G071000 PF13865 - C-terminal duplication domain of Friend of PRMT1 (FoP_duplication) Chr14 - View
Carya illinoinensis CiPaw.01G284200 K12881 - THO complex subunit 4 (THOC4, ALY) Chr01 + View
Citrullus lanatus ClCG02G020360 THO complex subunit CG_Chr02 - View
Cucumis melo MELO3C013685.2 THO complex subunit 4A chr11 + View
Capsella rubella Carub.0006s0133 PTHR19965//PTHR19965:SF29 - RNA AND EXPORT FACTOR BINDING PROTEIN // SUBFAMILY NOT NAMED scaffold_6 - View
Daucus carota DCAR_014840 hypothetical protein DCARv2_Chr4 - View
Daucus carota DCAR_027660 hypothetical protein DCARv2_Chr8 + View
Davidia involucrata Dinv37195 GWHABJS00000021 + View
Davidia involucrata Dinv35625 GWHABJS00000015 - View
Davidia involucrata Dinv25989 GWHABJS00000009 - View
Durio zibethinus Duzib106G1891 NW_019168492.1 + View
Durio zibethinus Duzib128G1580 NW_019168481.1 + View
Erigeron canadensis ECA238G3179 Conyza_canadensis_scaffold:6 - View
Erigeron canadensis ECA233G2531 Conyza_canadensis_scaffold:1 + View
Eucalyptus grandis Eucgr.B02389 Chr02 - View
Erythranthe guttata Migut.J00347 scaffold_10 - View
Eutrema salsugineum Thhalv10014286m.g PTHR19965//PTHR19965:SF29 - RNA AND EXPORT FACTOR BINDING PROTEIN // SUBFAMILY NOT NAMED scaffold_2 - View
Gossypium hirsutum Gohir.D07G100600 K12881 - THO complex subunit 4 (THOC4, ALY) D07 + View
Gossypium hirsutum Gohir.D13G233800 K12881 - THO complex subunit 4 (THOC4, ALY) D13 - View
Glycine max Glyma.13G334200 PTHR19965//PTHR19965:SF29 - RNA AND EXPORT FACTOR BINDING PROTEIN // SUBFAMILY NOT NAMED Gm13 + View
Glycine max Glyma.18G040400 PTHR19965//PTHR19965:SF33 - RNA AND EXPORT FACTOR BINDING PROTEIN // THO COMPLEX SUBUNIT 4D Gm18 + View
Gossypium raimondii Gorai.001G108500 Chr01 + View
Gossypium raimondii Gorai.013G264600 Chr13 - View
Hydrangea macrophylla Hma1.2p1_1065F.1_g253660 Hma1.2p1_1065F.1 - View
Lonicera japonica Lj2A1057G41 GWHAAZE00000002 + View
Lonicera japonica Lj1A157T43 GWHAAZE00000001 - View
Lonicera japonica Lj3A970T56 GWHAAZE00000003 + View
Lactuca sativa Lsat_1_v5_gn_6_31400 K12881 - THO complex subunit 4 (THOC4, ALY) Lsat_1_v8_lg_6 + View
Malus domestica MD03G1097200 RNA-binding (RRM/RBD/RNP motifs) family protein Chr03 - View
Manihot esculenta Manes.07G113400 Chromosome07 + View
Manihot esculenta Manes.04G032200 Chromosome04 + View
Nelumbo nucifera Nn2g10421 chr2 - View
Oryza sativa ssp. japonica Os03g0278300 Similar to THO complex subunit 4. Transcriptional coactivator-like protein. Similar to ALY protein. chr03 - View
Prunus persica Prupe.2G231500 Pp02 + View
Papaver somniferum PSO339G4215 NC_039366.1 + View
Papaver somniferum PSO648G0123 NW_020648748.1 + View
Phaseolus vulgaris Phvul.001G230200 PTHR19965:SF33 - THO COMPLEX SUBUNIT 4D Chr01 - View
Phaseolus vulgaris Phvul.L003743 PTHR19965//PTHR19965:SF29 - RNA AND EXPORT FACTOR BINDING PROTEIN // SUBFAMILY NOT NAMED scaffold_15 + View
Quercus lobata QL01p032964 1 - View
Rhododendron simsii Rhsim01G0225400 chr01 + View
Rhododendron simsii Rhsim05G0189500 chr05 + View
Striga asiatica SGA_v2.0_scaffold126G33807 scaffold126 - View
Salix brachista Sabra09G0019600 GWHAAZH00000009 + View
Salix brachista Sabra10G0160800 GWHAAZH00000010 - View
Salix brachista Sabra16G0142800 GWHAAZH00000016 + View
Simmondsia chinensis Sc12g0001620 GWHAASQ00000012 - View
Simmondsia chinensis Sc20g0004800 GWHAASQ00000020 + View
Solanum lycopersicum Solyc10g086400.2 THO complex subunit 4B (AHRD V3.3 *** A0A2G3BF44_CAPCH) SL4.0ch10 + View
Schrenkiella parvula Sp6g39980 PTHR19965//PTHR19965:SF29 - RNA AND EXPORT FACTOR BINDING PROTEIN // SUBFAMILY NOT NAMED ch6-6 + View
Solanum pennellii Sopen10g035780 RNA-binding (RRM/RBD/RNP motifs) family protein | FUNCTIONS IN: nucleotide binding, nucleic acid binding | INVOLVED IN: biological_process unknown | LOCATED IN: chloroplast | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein . Spenn-ch10 + View
Trochodendron aralioides TAR633G2207 group2 - View
Trochodendron aralioides TAR636G0228 group1 + View
Trochodendron aralioides TAR369G0298 group18 - View
Theobroma cacao Thecc.10G046800 RNA-binding family protein Chromosome_10 + View
Tarenaya hassleriana THA.LOC104816286 THO complex subunit 4B NW_010965775.1 - View
Tarenaya hassleriana THA.LOC104827008 THO complex subunit 4B-like NW_010967707.1 + View
Tarenaya hassleriana THA.LOC104823255 LOW QUALITY PROTEIN: THO complex subunit 4B-like NW_010966881.1 + View
Tripterygium wilfordii TWI31G0647 NC_052233.1 - View
Tripterygium wilfordii TWI38G0221 NC_052252.1 + View
Vaccinium macrocarpon vmacro20131 Similar to ALY1: THO complex subunit 4A (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 + View
Zea mays Zm00001eb397560 Zm00001e038471 THO complex subunit 4B 9 + View