Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Actinidia chinensis Actinidia18235 Lachesis_group13 - View
Actinidia chinensis Actinidia25447 Lachesis_group1 + View
Arabidopsis lyrata AL2G40760 scaffold_2 - View
Arabidopsis thaliana AT1G80680 SUPPRESSOR OF AUXIN RESISTANCE 3 Mutant has early-flowering phenotype%2C encodes a putative nucleoporin. Required for the activation of downstream defense pathways by the snc1 mutation. Involved in basal resistance against bacterial pathogens. SUPPRESSOR OF AUXIN RESISTANCE 3 (SAR3)%3B FUNCTIONS IN: porin activity%3B INVOLVED IN: mRNA export from nucleus%2C defense response signaling pathway%2C resistance gene-dependent%2C response to auxin stimulus%2C negative regulation of flower development%2C developmental process%3B LOCATED IN: nuclear membrane%2C nucleus%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Peptidase S59%2C nucleoporin (InterPro:IPR007230)%2C Nuclear protein 96 (InterPro:IPR021967)%3B BEST Arabidopsis thaliana protein match is: Nucleoporin autopeptidase (TAIR:AT1G10390.2)%3B Has 653 Blast hits to 526 proteins in 148 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 269%3B Fungi - 224%3B Plants - 93%3B Viruses - 0%3B Other Eukaryotes - 67 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaC08g45332 ChrC08 + View
Brassica carinata BcaB05g25235 ChrB05 - View
Brassica carinata BcaB02g07257 ChrB02 - View
Brassica napus C06p29420 C06 + View
Brassica napus A02p23230 A02 - View
Brassica napus A07p26790 A07 + View
Brassica napus C02p36990 C02 - View
Brassica oleracea BolC6t38107H C6 + View
Brassica rapa BraA02t07320Z A02 - View
Brassica rapa BraA07t30322Z A07 + View
Capsicum annuum CAN.G407.47 PGAv.1.6.scaffold407 + View
Cannabis sativa CANSAT56G3222 NC_044371.1 + View
Corylus avellana Haze_16646 Similar to NUP96: Nuclear pore complex protein NUP96 (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc04_g04890 Putative Nuclear pore complex protein Nup98-Nup96 chr4 + View
Citrus clementina Ciclev10024784m.g scaffold_7 + View
Carpinus fangiana Cfa001895 Cfa01 - View
Cardamine hirsuta CARHR073830 SUPPRESSOR OF AUXIN RESISTANCE 3 Chr2 - View
Carya illinoinensis CiPaw.01G252800 PTHR23198:SF0 - NUCLEAR PORE COMPLEX PROTEIN NUP96 HOMOLOG Chr01 + View
Capsella rubella Carub.0002s2688 PTHR23198:SF0 - NUCLEAR PORE COMPLEX PROTEIN NUP96 HOMOLOG scaffold_2 - View
Davidia involucrata Dinv21395 GWHABJS00000006 - View
Durio zibethinus Duzib235G0729 NW_019167982.1 - View
Eucalyptus grandis Eucgr.F03948 Chr06 + View
Erythranthe guttata Migut.I00709 scaffold_9 + View
Eutrema salsugineum Thhalv10018057m.g PTHR23198:SF0 - NUCLEAR PORE COMPLEX PROTEIN NUP96 HOMOLOG scaffold_9 + View
Lonicera japonica Lj5A78T80 GWHAAZE00000005 + View
Lactuca sativa Lsat_1_v5_gn_1_32000 PTHR23198:SF0 - NUCLEAR PORE COMPLEX PROTEIN NUP96 HOMOLOG Lsat_1_v8_lg_1 - View
Manihot esculenta Manes.04G104700 Chromosome04 - View
Petunia axillaris Peaxi162Scf00332g00329 Nuclear pore complex protein Nup96 homolog Peaxi162Scf00332 + View
Punica granatum PGR102G3368 NC_045129.1 - View
Quercus lobata QL05p034889 5 + View
Rhododendron simsii Rhsim08G0208100 chr08 - View
Striga asiatica SGA_v2.0_scaffold5G02755 scaffold5 + View
Salvia bowleyana SalBow7G2866 GWHASIU00000005 - View
Solanum lycopersicum Solyc03g117120.4 Nuclear pore complex protein NUP96 (AHRD V3.3 *** A0A1U8FUU9_CAPAN) SL4.0ch03 - View
Schrenkiella parvula Sp5g35080 PTHR23198//PTHR23198:SF0 - NUCLEOPORIN // NUCLEAR PORE COMPLEX PROTEIN NUP96 HOMOLOG ch5-7 - View
Solanum pennellii Sopen03g036030 Mutant has early-flowering phenotype, encodes a putative nucleoporin. Required for the activation of downstream defense pathways by the snc1 mutation. Involved in basal resistance against bacterial pathogens. | SUPPRESSOR OF AUXIN RESISTANCE 3 (SAR3) | FUNCTIONS IN: porin activity | INVOLVED IN: mRNA export from nucleus, defense response signaling pathway, resistance gene-dependent, response to auxin stimulus, negative regulation of flower development, developmental process | LOCATED IN: nuclear membrane, nucleus | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Peptidase S59, nucleoporin , Nuclear protein 96 | BEST Arabidopsis thaliana protein match is: Nucleoporin autopeptidase Spenn-ch03 - View
Solanum tuberosum PGSC0003DMG400014195 Nucleoporin ST4.03ch03 - View
Theobroma cacao Thecc.06G038600 Suppressor of auxin resistance 3 Chromosome_6 + View
Tarenaya hassleriana THA.LOC104812443 nuclear pore complex protein NUP96 NW_010965372.1 - View
Tripterygium wilfordii TWI12G1414 NC_052243.1 - View
Vaccinium macrocarpon vmacro19039 Similar to NUP96: Nuclear pore complex protein NUP96 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 + View